RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 ATXN2LQ8WWM7 1075 aaKnown RBP4.13□□□□□ -1.75
KTN1-217ENST00000554831 TTC17Q96AE7 1141 aa4.13□□□□□ -1.75
KTN1-217ENST00000554831 ARHGEF26Q96DR7 871 aa4.13□□□□□ -1.75
KTN1-217ENST00000554831 PRMT6Q96LA8 375 aaPredicted RBP4.13□□□□□ -1.75
KTN1-217ENST00000554831 OSBPL7Q9BZF2 842 aa4.13□□□□□ -1.75
KTN1-217ENST00000554831 RAVER2Q9HCJ3 691 aaKnown RBP4.13□□□□□ -1.75
KTN1-217ENST00000554831 PRM3Q9NNZ6 103 aa4.13□□□□□ -1.75
KTN1-217ENST00000554831 FER1L4A9Z1Z3 1794 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 KIF1AQ12756 1690 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 COPEO14579 308 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 ATMINO43313 823 aaPredicted RBP4.12□□□□□ -1.75
KTN1-217ENST00000554831 CCDC22O60826 627 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 PSMD10O75832 226 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 KRT3P12035 628 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 GTF2H1P32780 548 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 EFNA5P52803 228 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 TMPRSS15P98073 1019 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 PPP3CAQ08209 521 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 NFX1Q12986 1120 aaKnown RBP4.12□□□□□ -1.75
KTN1-217ENST00000554831 PPP2R5CQ13362 524 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 BAATQ14032 418 aaPredicted RBP4.12□□□□□ -1.75
KTN1-217ENST00000554831 KRT81Q14533 505 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 SLC30A10Q6XR72 485 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 LRRC6Q86X45 466 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 EXD1Q8NHP7 514 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 GABPB2Q8TAK5 448 aaPredicted RBP4.12□□□□□ -1.75
KTN1-217ENST00000554831 FEZF2Q8TBJ5 459 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 SPDL1Q96EA4 605 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 MBOAT7Q96N66 472 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 SENP7Q9BQF6 1050 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 TMEM109Q9BVC6 243 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 FRMD8Q9BZ67 464 aaPredicted RBP4.12□□□□□ -1.75
KTN1-217ENST00000554831 ECT2Q9H8V3 914 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 CD248Q9HCU0 757 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 GINM1Q9NU53 330 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 DDX56Q9NY93 547 aaKnown RBP4.12□□□□□ -1.75
KTN1-217ENST00000554831 PPARGC1AQ9UBK2 798 aaKnown RBP4.12□□□□□ -1.75
KTN1-217ENST00000554831 GGT7Q9UJ14 662 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 TBX20Q9UMR3 447 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 KDM3BQ7LBC6 1761 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 ASTN1O14525 1302 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 FSCN2O14926 492 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 RIPK2O43353 540 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 PRPSAP2O60256 369 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 SPAG6O75602 509 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 SGPL1O95470 568 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 BAG2O95816 211 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 STIP1P31948 543 aaKnown RBP4.12□□□□□ -1.75
KTN1-217ENST00000554831 NPTX2P47972 431 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 YARSP54577 528 aaKnown RBP4.12□□□□□ -1.75
KTN1-217ENST00000554831 BCAR1P56945 870 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 NOP14P78316 857 aaKnown RBP4.12□□□□□ -1.75
KTN1-217ENST00000554831 DDR1Q08345 913 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 NCOA4Q13772 614 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 AUHQ13825 339 aaKnown RBP4.12□□□□□ -1.75
KTN1-217ENST00000554831 TFDP1Q14186 410 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 KIF22Q14807 665 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 EPC2Q52LR7 807 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 ANKRD20A8PQ5CZ79 823 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 C12orf56Q8IXR9 622 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 FAM71AQ8IYT1 594 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 RBBP8NLQ8NC74 664 aaPredicted RBP4.12□□□□□ -1.75
KTN1-217ENST00000554831 ATG4AQ8WYN0 398 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 FAM149B1Q96BN6 582 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 ANKRD36BP1Q96IX9 119 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 TARS2Q9BW92 718 aaKnown RBP4.12□□□□□ -1.75
KTN1-217ENST00000554831 TEX13BQ9BXU2 312 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 FGFBP2Q9BYJ0 223 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 DNAJC18Q9H819 358 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 MAP3K20Q9NYL2 800 aaKnown RBP4.12□□□□□ -1.75
KTN1-217ENST00000554831 FBXO40Q9UH90 709 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 ATXN2Q99700 1313 aaKnown RBP4.12□□□□□ -1.75
KTN1-217ENST00000554831 LOC102724159A0A0B4J2E5 919 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 CFAP69A5D8W1 941 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 IGF2BP3O00425 579 aaKnown RBP eCLIP4.12□□□□□ -1.75
KTN1-217ENST00000554831 NQO1P15559 274 aaKnown RBP4.12□□□□□ -1.75
KTN1-217ENST00000554831 CCND2P30279 289 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 ACOT2P49753 483 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 KLC1Q07866 573 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 TTLL12Q14166 644 aaPredicted RBP4.12□□□□□ -1.75
KTN1-217ENST00000554831 PWP2Q15269 919 aaKnown RBP4.12□□□□□ -1.75
KTN1-217ENST00000554831 STXBP2Q15833 593 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 ECM1Q16610 540 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 EMC10Q5UCC4 262 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 BSPRYQ5W0U4 402 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 DARS2Q6PI48 645 aaKnown RBP4.12□□□□□ -1.75
KTN1-217ENST00000554831 NIPA1Q7RTP0 329 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 RFX6Q8HWS3 928 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 C4orf33Q8N1A6 199 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 TTC39CQ8N584 583 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 PPM1NQ8N819 430 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 KCTD6Q8NC69 237 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 RBM46Q8TBY0 533 aaKnown RBP4.12□□□□□ -1.75
KTN1-217ENST00000554831 SPIRE2Q8WWL2 714 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 CPA5Q8WXQ8 436 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 FAM167AQ96KS9 214 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 ANKRD27Q96NW4 1050 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 PDCD2LQ9BRP1 358 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 LRRC19Q9H756 370 aa4.12□□□□□ -1.75
KTN1-217ENST00000554831 ZFP69BQ9UJL9 534 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms