RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 XXYLT1Q8NBI6 393 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 SMPDL3BQ92485 455 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 SYMPKQ92797 1274 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 TEX13BQ9BXU2 312 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 FAM129AQ9BZQ8 928 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 LARSQ9P2J5 1176 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 ARHGEF9O43307 516 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 NDUFS2O75306 463 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 ACSL3O95573 720 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 MSR1P21757 451 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 PSMA2P25787 234 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 GNA11P29992 359 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 STX5Q13190 355 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 RINT1Q6NUQ1 792 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 ZNF274Q96GC6 653 aaPredicted RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 C10orf88Q9H8K7 445 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 TCP1P17987 556 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 CAMK1Q14012 370 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 SLC22A8Q8TCC7 542 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 YY1AP1Q9H869 796 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 GBA2Q9HCG7 927 aaPredicted RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 MCF2LO15068 1137 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 ALDH1A2O94788 518 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 LARGE1O95461 756 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 KLRK1P26718 216 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 DSG3P32926 999 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 ARL4AP40617 200 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 NEK5Q6P3R8 708 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 RNF208Q9H0X6 261 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 POLR3FQ9H1D9 316 aaPredicted RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 ARAP3Q8WWN8 1544 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 RBMXL2O75526 392 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 TXNP10599 105 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 COLEC12Q5KU26 742 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 IZUMO2Q6UXV1 221 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 OR10G6Q8NH81 332 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 COPS5Q92905 334 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 USP26Q9BXU7 913 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 RIBC2Q9H4K1 309 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 CLEC4AQ9UMR7 237 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 DIS3Q9Y2L1 958 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 RBM7Q9Y580 266 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 SCN2BO60939 215 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 KATNA1O75449 491 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 GSTM1P09488 218 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 SULT1E1P49888 294 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 RCN1Q15293 331 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 SYTL1Q8IYJ3 562 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 GOLPH3Q9H4A6 298 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 UBE2TQ9NPD8 197 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 KLHL14Q9P2G3 628 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 SEL1LQ9UBV2 794 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 DNAJC12Q9UKB3 198 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 LRPPRCP42704 1394 aaKnown RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 P4HA1P13674 534 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ELNP15502 786 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 PKP1Q13835 747 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 SPARCL1Q14515 664 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 THEM5Q8N1Q8 247 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 E2F7Q96AV8 911 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 CYFIP2Q96F07 1278 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 HIC2Q96JB3 615 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 TNIP3Q96KP6 325 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ARHGAP9Q9BRR9 750 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 CAAP1Q9H8G2 361 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 SPON1Q9HCB6 807 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 POLR3AO14802 1390 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 POTEMA6NI47 508 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ASNSP08243 561 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 PTPN1P18031 435 aaKnown RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 CDH2P19022 906 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 MSH2P43246 934 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 PAPOLAP51003 745 aaKnown RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ICE2Q659A1 982 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 SLC51AQ86UW1 340 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 IQUBQ8NA54 791 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 FKBPLQ9UIM3 349 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ZNF804BA4D1E1 1349 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 GNB5O14775 395 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 MAPK13O15264 365 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 GJA1P17302 382 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 IREB2P48200 963 aaKnown RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 MIS18BP1Q6P0N0 1132 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 SPATA2LQ8IUW3 424 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 RADILQ96JH8 1075 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 PDE11AQ9HCR9 933 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 RPS6KB2Q9UBS0 482 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 MARCOQ9UEW3 520 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 UHRF1BP1LA0JNW5 1464 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 TRIM43BA6NCK2 446 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 KIF28PB7ZC32 967 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 GJB6O95452 261 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 TUBB2AQ13885 445 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 EPHX4Q8IUS5 362 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 MAGOHBQ96A72 148 aaKnown RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 MTFMTQ96DP5 389 aaKnown RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 TUBB2BQ9BVA1 445 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 SIRPGQ9P1W8 387 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 A8MU76 341 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms