RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 CHD9Q3L8U1 2897 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 OTOL1A6NHN0 477 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-223ENST00000553686 FAM47E-STBD1D6RA91 191 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 ARVCFO00192 962 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 AQP7O14520 342 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 SLC27A2O14975 620 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 MAP4K4O95819 1239 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-223ENST00000553686 GNAT1P11488 350 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 KCNA5P22460 613 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 CYP2C18P33260 490 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 TCF15Q12870 199 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 LILRA6Q6PI73 481 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 MAMDC2Q7Z304 686 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-223ENST00000553686 RBM12BQ8IXT5 1001 aaKnown RBP7.17□□□□□ -1.26
ATXN3-223ENST00000553686 ABRAQ8N0Z2 381 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 ZGPATQ8N5A5 531 aaKnown RBP7.17□□□□□ -1.26
ATXN3-223ENST00000553686 KYQ8NBH2 561 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 PCSK9Q8NBP7 692 aaKnown RBP7.17□□□□□ -1.26
ATXN3-223ENST00000553686 PHOSPHO2Q8TCD6 241 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 CLEC4DQ8WXI8 215 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 C20orf173Q96LM9 149 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 ALG1Q9BT22 464 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 PUS3Q9BZE2 481 aaKnown RBP7.17□□□□□ -1.26
ATXN3-223ENST00000553686 IPPKQ9H8X2 491 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 IFT57Q9NWB7 429 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 ASH2LQ9UBL3 628 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 ARAP2Q8WZ64 1704 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 ECM29Q5VYK3 1845 aa7.17□□□□□ -1.26
ATXN3-223ENST00000553686 CFAP54Q96N23 3096 aa7.16□□□□□ -1.26
ATXN3-223ENST00000553686 MGAMO43451 1857 aa7.16□□□□□ -1.26
ATXN3-223ENST00000553686 A0A0U1RQG5 324 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-223ENST00000553686 PROB1E7EW31 1015 aa7.16□□□□□ -1.26
ATXN3-223ENST00000553686 CNMDO75829 334 aa7.16□□□□□ -1.26
ATXN3-223ENST00000553686 LRG1P02750 347 aa7.16□□□□□ -1.26
ATXN3-223ENST00000553686 PFKMP08237 780 aa7.16□□□□□ -1.26
ATXN3-223ENST00000553686 C6orf222P0C671 652 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-223ENST00000553686 ZNF853P0CG23 659 aa7.16□□□□□ -1.26
ATXN3-223ENST00000553686 AKR1A1P14550 325 aa7.16□□□□□ -1.26
ATXN3-223ENST00000553686 IL9P15248 144 aa7.16□□□□□ -1.26
ATXN3-223ENST00000553686 SARSP49591 514 aaKnown RBP7.16□□□□□ -1.26
ATXN3-223ENST00000553686 PUM3Q15397 648 aaKnown RBP7.16□□□□□ -1.26
ATXN3-223ENST00000553686 HERC4Q5GLZ8 1057 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-223ENST00000553686 ZC3H12BQ5HYM0 836 aaKnown RBP7.16□□□□□ -1.26
ATXN3-223ENST00000553686 CARFQ8N187 725 aa7.16□□□□□ -1.26
ATXN3-223ENST00000553686 C8orf58Q8NAV2 365 aa7.16□□□□□ -1.26
ATXN3-223ENST00000553686 EDAQ92838 391 aa7.16□□□□□ -1.26
ATXN3-223ENST00000553686 DRC1Q96MC2 740 aa7.16□□□□□ -1.26
ATXN3-223ENST00000553686 SPATA25Q9BR10 227 aa7.16□□□□□ -1.26
ATXN3-223ENST00000553686 HIPK3Q9H422 1215 aa7.16□□□□□ -1.26
ATXN3-223ENST00000553686 SPC25Q9HBM1 224 aa7.16□□□□□ -1.26
ATXN3-223ENST00000553686 DDX4Q9NQI0 724 aaKnown RBP7.16□□□□□ -1.26
ATXN3-223ENST00000553686 DTLQ9NZJ0 730 aa7.16□□□□□ -1.26
ATXN3-223ENST00000553686 MRPS23Q9Y3D9 190 aaKnown RBP7.16□□□□□ -1.26
ATXN3-223ENST00000553686 PCDHA8Q9Y5H6 950 aa7.16□□□□□ -1.26
ATXN3-223ENST00000553686 SPTBN4Q9H254 2564 aa7.16□□□□□ -1.26
ATXN3-223ENST00000553686 CLSPNQ9HAW4 1339 aa7.16□□□□□ -1.26
ATXN3-223ENST00000553686 EPOPA6NHQ4 379 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 NKRFO15226 690 aaKnown RBP eCLIP7.15□□□□□ -1.26
ATXN3-223ENST00000553686 ACTN1P12814 892 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 USP14P54578 494 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 ITGA1P56199 1179 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 GABREP78334 506 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 GUCY1A3Q02108 690 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 TAP1Q03518 808 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 GRIN1Q05586 938 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 PAK1Q13153 545 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 SPTY2D1Q68D10 685 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-223ENST00000553686 TEPPQ6URK8 271 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 CATSPERGQ6ZRH7 1159 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 DZIP1Q86YF9 867 aaKnown RBP7.15□□□□□ -1.26
ATXN3-223ENST00000553686 ADHFE1Q8IWW8 467 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 SHCBP1Q8NEM2 672 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 ANKS1AQ92625 1134 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 KISS1RQ969F8 398 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-223ENST00000553686 RUNDC1Q96C34 613 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 MAML3Q96JK9 1138 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 SEZ6LQ9BYH1 1024 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 OSBPL2Q9H1P3 480 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 MROH8Q9H579 483 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 HOXC10Q9NYD6 342 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 NTMQ9P121 344 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 BTBD7Q9P203 1132 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 PI4KBQ9UBF8 816 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 DENND2AQ9ULE3 1009 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 FAM184BQ9ULE4 1060 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 CNPY2Q9Y2B0 182 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 NUB1Q9Y5A7 615 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 SALL1Q9NSC2 1324 aa7.15□□□□□ -1.26
ATXN3-223ENST00000553686 LTBP2Q14767 1821 aa7.15□□□□□ -1.27
ATXN3-223ENST00000553686 TCF20Q9UGU0 1960 aaKnown RBP7.15□□□□□ -1.27
ATXN3-223ENST00000553686 FCER1AP12319 257 aa7.14□□□□□ -1.27
ATXN3-223ENST00000553686 THBS2P35442 1172 aa7.14□□□□□ -1.27
ATXN3-223ENST00000553686 BTDP43251 543 aa7.14□□□□□ -1.27
ATXN3-223ENST00000553686 CCL23P55773 120 aa7.14□□□□□ -1.27
ATXN3-223ENST00000553686 TUSC3Q13454 348 aa7.14□□□□□ -1.27
ATXN3-223ENST00000553686 MYO9BQ13459 2157 aa7.14□□□□□ -1.27
ATXN3-223ENST00000553686 LCE4AQ5TA78 99 aa7.14□□□□□ -1.27
ATXN3-223ENST00000553686 MAST2Q6P0Q8 1798 aa7.14□□□□□ -1.27
ATXN3-223ENST00000553686 DGLUCYQ7Z3D6 616 aa7.14□□□□□ -1.27
ATXN3-223ENST00000553686 MTDHQ86UE4 582 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms