RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 PDS5AQ29RF7 1337 aaKnown RBP5.56□□□□□ -1.52
ATXN3-220ENST00000553491 TCRBV5S4A2TA0A5A2 114 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 DDTLA6NHG4 134 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-220ENST00000553491 GSTA4O15217 222 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 ENTPD3O75355 529 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 TADA3O75528 432 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 F2P00734 622 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 AMY2AP04746 511 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 HSPA1AP0DMV8 641 aaKnown RBP5.56□□□□□ -1.52
ATXN3-220ENST00000553491 HSPA1BP0DMV9 641 aaKnown RBP5.56□□□□□ -1.52
ATXN3-220ENST00000553491 COL6A2P12110 1019 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 AMY2BP19961 511 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 MAP2K2P36507 400 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 SCNN1BP51168 640 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 LACTBP83111 547 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-220ENST00000553491 DSG1Q02413 1049 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 NOGQ13253 232 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 CRY1Q16526 586 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 HABP4Q5JVS0 413 aaKnown RBP5.56□□□□□ -1.52
ATXN3-220ENST00000553491 FKBP1CQ5VVH2 108 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 LILRA6Q6PI73 481 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 OTOP3Q7RTS5 596 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 OSTM1Q86WC4 334 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 CHD1LQ86WJ1 897 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 AMOTL1Q8IY63 956 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 ADGRG2Q8IZP9 1017 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 SYT8Q8NBV8 401 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 OR2W6PQ8NHA6 318 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 ATL2Q8NHH9 583 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 ZNF384Q8TF68 577 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.56□□□□□ -1.52
ATXN3-220ENST00000553491 CCDC136Q96JN2 1154 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 CRNKL1Q9BZJ0 848 aaKnown RBP5.56□□□□□ -1.52
ATXN3-220ENST00000553491 EPB41L1Q9H4G0 881 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 ZCCHC4Q9H5U6 513 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 LUC7LQ9NQ29 371 aaKnown RBP5.56□□□□□ -1.52
ATXN3-220ENST00000553491 DDX4Q9NQI0 724 aaKnown RBP5.56□□□□□ -1.52
ATXN3-220ENST00000553491 MCM9Q9NXL9 1143 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 B4GALT6Q9UBX8 382 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 MCM8Q9UJA3 840 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 SLC4A4Q9Y6R1 1079 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 PMF1-BGLAPU3KQ54 211 aa5.56□□□□□ -1.52
ATXN3-220ENST00000553491 LAMB1P07942 1786 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 GAKO14976 1311 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 A0A1B0GTL3 188 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 OTOL1A6NHN0 477 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-220ENST00000553491 ZNF561-AS1K7EIQ3 104 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 MPHOSPH10O00566 681 aaKnown RBP5.55□□□□□ -1.52
ATXN3-220ENST00000553491 NEMP1O14524 444 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 NKRFO15226 690 aaKnown RBP eCLIP5.55□□□□□ -1.52
ATXN3-220ENST00000553491 RNF113AO15541 343 aaKnown RBP5.55□□□□□ -1.52
ATXN3-220ENST00000553491 PRKAB2O43741 272 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 WDHD1O75717 1129 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-220ENST00000553491 DGKIO75912 1065 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 MBD4O95243 580 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 CHGBP05060 677 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 HLA-DOAP06340 250 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 GNAT1P11488 350 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 BPIP17213 487 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 ID4P47928 161 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 LBX1P52954 281 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 PDE1AP54750 535 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 SLURP1P55000 103 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 JAM2P57087 298 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 RHBDL3P58872 404 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 EMC4Q5J8M3 183 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 OTUD7BQ6GQQ9 843 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 LIPIQ6XZB0 460 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 GADL1Q6ZQY3 521 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 MILR1Q7Z6M3 343 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 RASAL3Q86YV0 1011 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 FAM26EQ8N5C1 309 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 CHST14Q8NCH0 376 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 PIP4K2CQ8TBX8 421 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 SDR42E1Q8WUS8 393 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 OPTNQ96CV9 577 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 TEPSINQ96N21 525 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 GORASP1Q9BQQ3 440 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 IDI2Q9BXS1 227 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 KRTAP4-5Q9BYR2 181 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 AP5M1Q9H0R1 490 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 SMURF1Q9HCE7 757 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 CABP5Q9NP86 173 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 FAN1Q9Y2M0 1017 aa5.55□□□□□ -1.52
ATXN3-220ENST00000553491 COA3Q9Y2R0 106 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-220ENST00000553491 TTC41PQ6P2S7 1318 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 SIPA1L1O43166 1804 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 PTPDC1A2A3K4 754 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 FOXN1O15353 648 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 ATP2A2P16615 1042 aaKnown RBP5.54□□□□□ -1.52
ATXN3-220ENST00000553491 CPEP16870 476 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 KRT15P19012 456 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 ADD2P35612 726 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 CTCFP49711 727 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-220ENST00000553491 NUCB1Q02818 461 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 SPIRE1Q08AE8 756 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 SREBF2Q12772 1141 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 VGLL4Q14135 290 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 STAT4Q14765 748 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 GPR19Q15760 415 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms