RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 GINM1Q9NU53 330 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 GLI3P10071 1580 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 TMEM150BA6NC51 233 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 SPDYE5A6NIY4 337 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 GJB6O95452 261 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 KCNA3P22001 575 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 PCNX4Q63HM2 1172 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 TEX9Q8N6V9 391 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 TRIM55Q9BYV6 548 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 CCDC134Q9H6E4 229 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 KIF13AQ9H1H9 1805 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 IPO5O00410 1097 aaKnown RBP12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 MAP3K7O43318 606 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 SNUPNO95149 360 aaKnown RBP12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 CETPP11597 493 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 ARFIP2P53365 341 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 LRRC36Q1X8D7 754 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 RNF43Q68DV7 783 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 CDC42EP5Q6NZY7 148 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 TMEM109Q9BVC6 243 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 HEY2Q9UBP5 337 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 POLLQ9UGP5 575 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 CHKBQ9Y259 395 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 SUGT1Q9Y2Z0 365 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 ARHGAP42A6NI28 874 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 UBAP1LF5GYI3 381 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 OPHN1O60890 802 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 CIB2O75838 187 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 CHRNB2P17787 502 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 RFX1P22670 979 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 SREBF1P36956 1147 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 WDR4P57081 412 aaKnown RBP12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 SNX30Q5VWJ9 437 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 KRT39Q6A163 491 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 WDR11Q9BZH6 1224 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 DCLK3Q9C098 648 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 HNRNPDLO14979 420 aaKnown RBP12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 ZBED4O75132 1171 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 ARP10275 920 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 KITP10721 976 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 ETS1P14921 441 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 SERPINB4P48594 390 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 RNF220Q5VTB9 566 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 CENPUQ71F23 418 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 HIPK4Q8NE63 616 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 DCAF4Q8WV16 495 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 FGD4Q96M96 766 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 TUFT1Q9NNX1 390 aa12.28□□□□□ -0.44
PPFIA2-227ENST00000552948 SLIT2O94813 1529 aa12.27□□□□□ -0.44
PPFIA2-227ENST00000552948 NUP98P52948 1817 aa12.27□□□□□ -0.44
PPFIA2-227ENST00000552948 SNHG28P0DPA3 235 aa12.27□□□□□ -0.44
PPFIA2-227ENST00000552948 MGAT5Q09328 741 aa12.27□□□□□ -0.44
PPFIA2-227ENST00000552948 BMT2Q1RMZ1 405 aa12.27□□□□□ -0.44
PPFIA2-227ENST00000552948 TAS1R2Q8TE23 839 aa12.27□□□□□ -0.44
PPFIA2-227ENST00000552948 NGLY1Q96IV0 654 aa12.27□□□□□ -0.44
PPFIA2-227ENST00000552948 DENND2DQ9H6A0 471 aaPredicted RBP12.27□□□□□ -0.44
PPFIA2-227ENST00000552948 LRRC19Q9H756 370 aa12.27□□□□□ -0.44
PPFIA2-227ENST00000552948 IRAK4Q9NWZ3 460 aa12.27□□□□□ -0.44
PPFIA2-227ENST00000552948 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.27□□□□□ -0.44
PPFIA2-227ENST00000552948 C2CD2Q9Y426 696 aa12.27□□□□□ -0.44
PPFIA2-227ENST00000552948 PCDHB4Q9Y5E5 795 aa12.27□□□□□ -0.44
PPFIA2-227ENST00000552948 TLR3O15455 904 aaKnown RBP12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 BANF1O75531 89 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 MT-ND3P03897 115 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 GZMAP12544 262 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 YY1P25490 414 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 TM4SF1P30408 202 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 ABL2P42684 1182 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 SPIRE1Q08AE8 756 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 GALNTL6Q49A17 601 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 CEP55Q53EZ4 464 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 ZNF394Q53GI3 561 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 DPY19L2P1Q6NXN4 242 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 VTI1AQ96AJ9 217 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 P2RX7Q99572 595 aaKnown RBP12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 DDX50Q9BQ39 737 aaKnown RBP12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 DCLRE1BQ9H816 532 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 TAF1P21675 1872 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 A0A1W2PPM1 405 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 YWHAGP61981 247 aaKnown RBP eCLIP12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 IRX4P78413 519 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 FMO1Q01740 532 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 SNRNP35Q16560 246 aaKnown RBP12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 ACAD10Q6JQN1 1059 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 CEP128Q6ZU80 1094 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 OTOP1Q7RTM1 612 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 RHOT1Q8IXI2 618 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 FBXL13Q8NEE6 735 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 AAASQ9NRG9 546 aa12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 PPARGC1AQ9UBK2 798 aaKnown RBP12.27□□□□□ -0.45
PPFIA2-227ENST00000552948 CACNA1SQ13698 1873 aa12.26□□□□□ -0.45
PPFIA2-227ENST00000552948 ZNF142P52746 1687 aaPredicted RBP12.26□□□□□ -0.45
PPFIA2-227ENST00000552948 ATP9AO75110 1047 aa12.26□□□□□ -0.45
PPFIA2-227ENST00000552948 KRT36O76013 467 aa12.26□□□□□ -0.45
PPFIA2-227ENST00000552948 ZBTB48P10074 688 aaPredicted RBP12.26□□□□□ -0.45
PPFIA2-227ENST00000552948 ADRA1DP25100 572 aa12.26□□□□□ -0.45
PPFIA2-227ENST00000552948 BASP1P80723 227 aaKnown RBP12.26□□□□□ -0.45
PPFIA2-227ENST00000552948 THOC5Q13769 683 aaKnown RBP12.26□□□□□ -0.45
PPFIA2-227ENST00000552948 KPNB1Q14974 876 aaKnown RBP12.26□□□□□ -0.45
PPFIA2-227ENST00000552948 Q4G0T1 1027 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms