RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 FOXR2Q6PJQ5 311 aa9.91□□□□□ -0.82
CCDC59-207ENST00000552606 CD300LGQ6UXG3 332 aa9.91□□□□□ -0.82
CCDC59-207ENST00000552606 CD302Q8IX05 232 aa9.91□□□□□ -0.82
CCDC59-207ENST00000552606 DEFB123Q8N688 67 aa9.91□□□□□ -0.82
CCDC59-207ENST00000552606 C3orf58Q8NDZ4 430 aa9.91□□□□□ -0.82
CCDC59-207ENST00000552606 PLEKHO2Q8TD55 490 aa9.91□□□□□ -0.82
CCDC59-207ENST00000552606 IGSF21Q96ID5 467 aa9.91□□□□□ -0.82
CCDC59-207ENST00000552606 FAM161BQ96MY7 647 aa9.91□□□□□ -0.82
CCDC59-207ENST00000552606 TSPAN18Q96SJ8 248 aa9.91□□□□□ -0.82
CCDC59-207ENST00000552606 AAASQ9NRG9 546 aa9.91□□□□□ -0.82
CCDC59-207ENST00000552606 SLC38A7Q9NVC3 462 aa9.91□□□□□ -0.82
CCDC59-207ENST00000552606 SPG21Q9NZD8 308 aa9.91□□□□□ -0.82
CCDC59-207ENST00000552606 LZTS1Q9Y250 596 aa9.91□□□□□ -0.82
CCDC59-207ENST00000552606 DERAQ9Y315 318 aa9.91□□□□□ -0.82
CCDC59-207ENST00000552606 PCDHB12Q9Y5F1 795 aa9.91□□□□□ -0.82
CCDC59-207ENST00000552606 NT5C1B-RDH14C9J2C7 533 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 PSMA7O14818 248 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 FSCN2O14926 492 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 MAPK13O15264 365 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 CALUO43852 315 aaPredicted RBP9.9□□□□□ -0.82
CCDC59-207ENST00000552606 AKAP3O75969 853 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 POU3F3P20264 500 aaPredicted RBP9.9□□□□□ -0.82
CCDC59-207ENST00000552606 CYP3A5P20815 502 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 NR2F2P24468 414 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 IGFBP6P24592 240 aaPredicted RBP9.9□□□□□ -0.82
CCDC59-207ENST00000552606 CCNE1P24864 410 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 ALDH7A1P49419 539 aaKnown RBP9.9□□□□□ -0.82
CCDC59-207ENST00000552606 CLCNKBP51801 687 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 GUCY2FP51841 1108 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 MCCD1P59942 119 aaPredicted RBP9.9□□□□□ -0.82
CCDC59-207ENST00000552606 UBE3AQ05086 875 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 LRRC63Q05C16 580 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 GPM6BQ13491 265 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 HSP90AA2PQ14568 343 aaPredicted RBP9.9□□□□□ -0.82
CCDC59-207ENST00000552606 TMEM132DQ14C87 1099 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 PSMD6Q15008 389 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 UPP1Q16831 310 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 SPOUT1Q5T280 376 aaKnown RBP9.9□□□□□ -0.82
CCDC59-207ENST00000552606 SPATA1Q5VX52 437 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 NT5DC4Q86YG4 428 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 CXorf38Q8TB03 319 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 SPPL3Q8TCT6 385 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 DHTKD1Q96HY7 919 aaPredicted RBP9.9□□□□□ -0.82
CCDC59-207ENST00000552606 FAM84AQ96KN4 292 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 MFSD14AQ96MC6 490 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 UROC1Q96N76 676 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 FAM193BQ96PV7 902 aaPredicted RBP9.9□□□□□ -0.82
CCDC59-207ENST00000552606 MED15Q96RN5 788 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 CDX2Q99626 313 aaPredicted RBP9.9□□□□□ -0.82
CCDC59-207ENST00000552606 DUSP9Q99956 384 aaKnown RBP9.9□□□□□ -0.82
CCDC59-207ENST00000552606 LMAN2LQ9H0V9 348 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 ZBP1Q9H171 429 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 KIAA1586Q9HCI6 787 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 PDE11AQ9HCR9 933 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 ALG13Q9NP73 1137 aaKnown RBP9.9□□□□□ -0.82
CCDC59-207ENST00000552606 UBQLN1Q9UMX0 589 aaKnown RBP9.9□□□□□ -0.82
CCDC59-207ENST00000552606 CTNND2Q9UQB3 1225 aa9.9□□□□□ -0.82
CCDC59-207ENST00000552606 PRG3Q9Y2Y8 225 aaPredicted RBP9.9□□□□□ -0.82
CCDC59-207ENST00000552606 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.9□□□□□ -0.82
CCDC59-207ENST00000552606 BRWD1Q9NSI6 2320 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 PATJQ8NI35 1801 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 ANO9A1A5B4 782 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 ZNF233A6NK53 670 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 PODXLO00592 558 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 PPEF2O14830 753 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 EXOC3O60645 756 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 OR1G1P47890 313 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 CLDN10P78369 228 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 PAK1Q13153 545 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 STIM1Q13586 685 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 ANKRD40Q6AI12 368 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 DDX53Q86TM3 631 aaKnown RBP9.89□□□□□ -0.83
CCDC59-207ENST00000552606 WDR49Q8IV35 697 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 POF1BQ8WVV4 589 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 NELFBQ8WX92 580 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 MYLIPQ8WY64 445 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 RABGGTAQ92696 567 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 MRPL38Q96DV4 380 aaKnown RBP9.89□□□□□ -0.83
CCDC59-207ENST00000552606 BORCS6Q96GS4 357 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 CGRRF1Q99675 332 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 MKNK1Q9BUB5 465 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 HERC2P3Q9BVR0 1158 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 ADAM28Q9UKQ2 775 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 FAN1Q9Y2M0 1017 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 MTCH2Q9Y6C9 303 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 OBSL1O75147 1896 aa9.89□□□□□ -0.83
CCDC59-207ENST00000552606 GREB1Q4ZG55 1949 aa9.88□□□□□ -0.83
CCDC59-207ENST00000552606 SLC16A3O15427 465 aaKnown RBP9.88□□□□□ -0.83
CCDC59-207ENST00000552606 XPOTO43592 962 aaKnown RBP9.88□□□□□ -0.83
CCDC59-207ENST00000552606 HOXB3P14651 431 aaPredicted RBP9.88□□□□□ -0.83
CCDC59-207ENST00000552606 HOXB1P14653 301 aaPredicted RBP9.88□□□□□ -0.83
CCDC59-207ENST00000552606 RPL9P32969 192 aaKnown RBP9.88□□□□□ -0.83
CCDC59-207ENST00000552606 IRS1P35568 1242 aa9.88□□□□□ -0.83
CCDC59-207ENST00000552606 AARSP49588 968 aaKnown RBP eCLIP9.88□□□□□ -0.83
CCDC59-207ENST00000552606 NLRP12P59046 1061 aa9.88□□□□□ -0.83
CCDC59-207ENST00000552606 ENPEPQ07075 957 aa9.88□□□□□ -0.83
CCDC59-207ENST00000552606 C1orf220Q5T0J3 134 aa9.88□□□□□ -0.83
CCDC59-207ENST00000552606 LMBRD2Q68DH5 695 aaPredicted RBP9.88□□□□□ -0.83
CCDC59-207ENST00000552606 SCARA3Q6AZY7 606 aa9.88□□□□□ -0.83
CCDC59-207ENST00000552606 KLHL10Q6JEL2 608 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms