RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 ALOXE3Q9BYJ1 711 aa6.23□□□□□ -1.41
GPN3-209ENST00000551079 C11orf54Q9H0W9 315 aaPredicted RBP6.23□□□□□ -1.41
GPN3-209ENST00000551079 TDP1Q9NUW8 608 aa6.23□□□□□ -1.41
GPN3-209ENST00000551079 SYBUQ9NX95 663 aa6.23□□□□□ -1.41
GPN3-209ENST00000551079 GPANK1O95872 356 aa6.22□□□□□ -1.41
GPN3-209ENST00000551079 FGFR4P22455 802 aa6.22□□□□□ -1.41
GPN3-209ENST00000551079 SLC6A2P23975 617 aa6.22□□□□□ -1.41
GPN3-209ENST00000551079 CDC42EP1Q00587 391 aa6.22□□□□□ -1.41
GPN3-209ENST00000551079 B3GNTL1Q67FW5 361 aaPredicted RBP6.22□□□□□ -1.41
GPN3-209ENST00000551079 NUP133Q8WUM0 1156 aa6.22□□□□□ -1.41
GPN3-209ENST00000551079 CAVIN3Q969G5 261 aa6.22□□□□□ -1.41
GPN3-209ENST00000551079 BOD1Q96IK1 185 aa6.22□□□□□ -1.41
GPN3-209ENST00000551079 ZSWIM1Q9BR11 485 aa6.22□□□□□ -1.41
GPN3-209ENST00000551079 GSTO2Q9H4Y5 243 aa6.22□□□□□ -1.41
GPN3-209ENST00000551079 KCNE5Q9UJ90 142 aa6.22□□□□□ -1.41
GPN3-209ENST00000551079 TCRBV7S2A1N4TA0A589 114 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 GABRDO14764 452 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 KIAA0391O15091 583 aaKnown RBP6.21□□□□□ -1.42
GPN3-209ENST00000551079 SGTAO43765 313 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 PCDHGA12O60330 932 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 PPFIA2O75334 1257 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 KATNA1O75449 491 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 LMNAP02545 664 aaKnown RBP6.21□□□□□ -1.42
GPN3-209ENST00000551079 EGR2P11161 476 aaPredicted RBP6.21□□□□□ -1.42
GPN3-209ENST00000551079 ITGAMP11215 1152 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 BMP5P22003 454 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 CXADRP78310 365 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 FAM50AQ14320 339 aaKnown RBP6.21□□□□□ -1.42
GPN3-209ENST00000551079 DNAJC10Q8IXB1 793 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 GPR150Q8NGU9 434 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 ASB10Q8WXI3 467 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 LINC00476Q8WZB0 136 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 RNF31Q96EP0 1072 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 TMX3Q96JJ7 454 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 PNKPQ96T60 521 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 CCDC8Q9H0W5 538 aaPredicted RBP6.21□□□□□ -1.42
GPN3-209ENST00000551079 GALNT9Q9HCQ5 603 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 TMEM74BQ9NUR3 256 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 PCDHGA9Q9Y5G4 932 aaKnown RBP6.21□□□□□ -1.42
GPN3-209ENST00000551079 PCDHGA8Q9Y5G5 932 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 PCDHGA7Q9Y5G6 932 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 PCDHGA6Q9Y5G7 932 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 PCDHGA3Q9Y5H0 932 aa6.21□□□□□ -1.42
GPN3-209ENST00000551079 CDHR4A6H8M9 788 aa6.2□□□□□ -1.42
GPN3-209ENST00000551079 PRSS23O95084 383 aa6.2□□□□□ -1.42
GPN3-209ENST00000551079 ADRA1BP35368 520 aa6.2□□□□□ -1.42
GPN3-209ENST00000551079 NANOS3P60323 173 aaKnown RBP6.2□□□□□ -1.42
GPN3-209ENST00000551079 HSD11B2P80365 405 aa6.2□□□□□ -1.42
GPN3-209ENST00000551079 PPP4R3AQ6IN85 833 aa6.2□□□□□ -1.42
GPN3-209ENST00000551079 PNMA8AQ86V59 439 aaPredicted RBP6.2□□□□□ -1.42
GPN3-209ENST00000551079 FUBP1Q96AE4 644 aaKnown RBP6.2□□□□□ -1.42
GPN3-209ENST00000551079 TEKT5Q96M29 485 aa6.2□□□□□ -1.42
GPN3-209ENST00000551079 CRAMP1Q96RY5 1269 aa6.2□□□□□ -1.42
GPN3-209ENST00000551079 TESQ9UGI8 421 aaKnown RBP6.2□□□□□ -1.42
GPN3-209ENST00000551079 MTO1Q9Y2Z2 717 aaKnown RBP6.2□□□□□ -1.42
GPN3-209ENST00000551079 IPPQ9Y573 584 aa6.2□□□□□ -1.42
GPN3-209ENST00000551079 PCDHA13Q9Y5I0 950 aa6.2□□□□□ -1.42
GPN3-209ENST00000551079 EPN1Q9Y6I3 576 aaPredicted RBP6.2□□□□□ -1.42
GPN3-209ENST00000551079 AATKQ6ZMQ8 1374 aa6.19□□□□□ -1.42
GPN3-209ENST00000551079 HTRA2O43464 458 aaPredicted RBP6.19□□□□□ -1.42
GPN3-209ENST00000551079 HAUS5O94927 633 aa6.19□□□□□ -1.42
GPN3-209ENST00000551079 RPLP2P05387 115 aaKnown RBP6.19□□□□□ -1.42
GPN3-209ENST00000551079 MTHFD1P11586 935 aaKnown RBP6.19□□□□□ -1.42
GPN3-209ENST00000551079 SEC24CP53992 1094 aa6.19□□□□□ -1.42
GPN3-209ENST00000551079 KIF23Q02241 960 aaPredicted RBP6.19□□□□□ -1.42
GPN3-209ENST00000551079 TARDBPQ13148 414 aaKnown RBP eCLIP6.19□□□□□ -1.42
GPN3-209ENST00000551079 PCBP2Q15366 365 aaKnown RBP eCLIP6.19□□□□□ -1.42
GPN3-209ENST00000551079 EFCAB2Q5VUJ9 269 aa6.19□□□□□ -1.42
GPN3-209ENST00000551079 ZCRB1Q8TBF4 217 aaKnown RBP6.19□□□□□ -1.42
GPN3-209ENST00000551079 TBC1D15Q8TC07 691 aa6.19□□□□□ -1.42
GPN3-209ENST00000551079 MARS2Q96GW9 593 aaKnown RBP6.19□□□□□ -1.42
GPN3-209ENST00000551079 MED15Q96RN5 788 aa6.19□□□□□ -1.42
GPN3-209ENST00000551079 SLC13A1Q9BZW2 595 aa6.19□□□□□ -1.42
GPN3-209ENST00000551079 TBCCD1Q9NVR7 557 aa6.19□□□□□ -1.42
GPN3-209ENST00000551079 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.19□□□□□ -1.42
GPN3-209ENST00000551079 USP25Q9UHP3 1055 aa6.19□□□□□ -1.42
GPN3-209ENST00000551079 WASHC2CQ9Y4E1 1318 aa6.19□□□□□ -1.42
GPN3-209ENST00000551079 KAT6AQ92794 2004 aa6.18□□□□□ -1.42
GPN3-209ENST00000551079 MYADML2A6NDP7 307 aa6.18□□□□□ -1.42
GPN3-209ENST00000551079 FZD9O00144 591 aa6.18□□□□□ -1.42
GPN3-209ENST00000551079 ERN1O75460 977 aaKnown RBP6.18□□□□□ -1.42
GPN3-209ENST00000551079 FDXRP22570 491 aa6.18□□□□□ -1.42
GPN3-209ENST00000551079 NOMO3P69849 1222 aa6.18□□□□□ -1.42
GPN3-209ENST00000551079 MPP3Q13368 585 aa6.18□□□□□ -1.42
GPN3-209ENST00000551079 RAB39AQ14964 217 aa6.18□□□□□ -1.42
GPN3-209ENST00000551079 PTPN21Q16825 1174 aa6.18□□□□□ -1.42
GPN3-209ENST00000551079 ERCC6LQ2NKX8 1250 aa6.18□□□□□ -1.42
GPN3-209ENST00000551079 PABPC1LQ4VXU2 614 aaKnown RBP6.18□□□□□ -1.42
GPN3-209ENST00000551079 NOMO2Q5JPE7 1267 aa6.18□□□□□ -1.42
GPN3-209ENST00000551079 OLFML1Q6UWY5 402 aa6.18□□□□□ -1.42
GPN3-209ENST00000551079 GPR149Q86SP6 731 aa6.18□□□□□ -1.42
GPN3-209ENST00000551079 COLGALT2Q8IYK4 626 aa6.18□□□□□ -1.42
GPN3-209ENST00000551079 DCBLD1Q8N8Z6 715 aa6.18□□□□□ -1.42
GPN3-209ENST00000551079 IFI44Q8TCB0 444 aa6.18□□□□□ -1.42
GPN3-209ENST00000551079 SLC9A6Q92581 669 aa6.18□□□□□ -1.42
GPN3-209ENST00000551079 COA7Q96BR5 231 aa6.18□□□□□ -1.42
GPN3-209ENST00000551079 PCDH12Q9NPG4 1184 aa6.18□□□□□ -1.42
GPN3-209ENST00000551079 ZNHIT2Q9UHR6 403 aa6.18□□□□□ -1.42
GPN3-209ENST00000551079 LIMCH1Q9UPQ0 1083 aa6.18□□□□□ -1.42
GPN3-209ENST00000551079 SPEF1Q9Y4P9 236 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms