RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 DSEQ9UL01 958 aa6.36□□□□□ -1.39
PFDN5-209ENST00000550069 OTOFQ9HC10 1997 aa6.36□□□□□ -1.39
PFDN5-209ENST00000550069 FLT1P17948 1338 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 ZNF532Q9HCE3 1301 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 CCDC66A2RUB6 948 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 FAM90A27PA6NNH2 459 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 ADM5C9JUS6 153 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 ZNF561-AS1K7EIQ3 104 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 GOLIM4O00461 696 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 KRIT1O00522 736 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 ASMTLO95671 621 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 CETPP11597 493 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 KRT15P19012 456 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 CCDC178Q5BJE1 867 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 TATDN1Q6P1N9 297 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 ARHGAP36Q6ZRI8 547 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 ZC3H7AQ8IWR0 971 aaKnown RBP6.35□□□□□ -1.39
PFDN5-209ENST00000550069 SCYL3Q8IZE3 742 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 FEZF2Q8TBJ5 459 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 FBXW5Q969U6 566 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 KCNC2Q96PR1 638 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 SPATA25Q9BR10 227 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 YIPF4Q9BSR8 244 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 MXD3Q9BW11 206 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 MRPL4Q9BYD3 311 aaKnown RBP6.35□□□□□ -1.39
PFDN5-209ENST00000550069 SH2D4AQ9H788 454 aa6.35□□□□□ -1.39
PFDN5-209ENST00000550069 PIH1D3Q9NQM4 214 aaKnown RBP6.35□□□□□ -1.39
PFDN5-209ENST00000550069 AATFQ9NY61 560 aaKnown RBP eCLIP6.35□□□□□ -1.39
PFDN5-209ENST00000550069 BAZ2AQ9UIF9 1905 aaKnown RBP6.35□□□□□ -1.39
PFDN5-209ENST00000550069 PHIPQ8WWQ0 1821 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 ROBO3Q96MS0 1386 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.34□□□□□ -1.39
PFDN5-209ENST00000550069 SHTN1A0MZ66 631 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 CLRN2A0PK11 232 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 TCP10L2B9ZVM9 353 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 CTCFP49711 727 aaPredicted RBP6.34□□□□□ -1.39
PFDN5-209ENST00000550069 USP14P54578 494 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 SPIRE1Q08AE8 756 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 SNAPC2Q13487 334 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 PKN2Q16513 984 aaKnown RBP6.34□□□□□ -1.39
PFDN5-209ENST00000550069 MCMDC2Q4G0Z9 681 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 BMP2KLQ5H9B9 411 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 ZC3H12BQ5HYM0 836 aaKnown RBP6.34□□□□□ -1.39
PFDN5-209ENST00000550069 CYP4F22Q6NT55 531 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 CASC1Q6TDU7 716 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 LINC01356Q8N9X3 169 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 ZNF384Q8TF68 577 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 TOE1Q96GM8 510 aaKnown RBP6.34□□□□□ -1.39
PFDN5-209ENST00000550069 FSD1Q9BTV5 496 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 MAF1Q9H063 256 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 CABP5Q9NP86 173 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 CATSPERZQ9NTU4 200 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 CTNNA3Q9UI47 895 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 PNMA2Q9UL42 364 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 SRPK3Q9UPE1 567 aa6.34□□□□□ -1.39
PFDN5-209ENST00000550069 SSC5DA1L4H1 1573 aa6.33□□□□□ -1.4
PFDN5-209ENST00000550069 TRAF5O00463 557 aa6.33□□□□□ -1.4
PFDN5-209ENST00000550069 PRMT2P55345 433 aa6.33□□□□□ -1.4
PFDN5-209ENST00000550069 GABPAQ06546 454 aa6.33□□□□□ -1.4
PFDN5-209ENST00000550069 GPR19Q15760 415 aa6.33□□□□□ -1.4
PFDN5-209ENST00000550069 PAN2Q504Q3 1202 aaKnown RBP6.33□□□□□ -1.4
PFDN5-209ENST00000550069 CPZQ66K79 652 aa6.33□□□□□ -1.4
PFDN5-209ENST00000550069 TMEM179Q6ZVK1 233 aa6.33□□□□□ -1.4
PFDN5-209ENST00000550069 KCTD1Q719H9 257 aa6.33□□□□□ -1.4
PFDN5-209ENST00000550069 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.33□□□□□ -1.4
PFDN5-209ENST00000550069 RASAL3Q86YV0 1011 aa6.33□□□□□ -1.4
PFDN5-209ENST00000550069 PHOSPHO1Q8TCT1 267 aa6.33□□□□□ -1.4
PFDN5-209ENST00000550069 LPAR1Q92633 364 aa6.33□□□□□ -1.4
PFDN5-209ENST00000550069 WNK4Q96J92 1243 aa6.33□□□□□ -1.4
PFDN5-209ENST00000550069 ZNF830Q96NB3 372 aaPredicted RBP6.33□□□□□ -1.4
PFDN5-209ENST00000550069 WRNIP1Q96S55 665 aa6.33□□□□□ -1.4
PFDN5-209ENST00000550069 STRBPQ96SI9 672 aaKnown RBP6.33□□□□□ -1.4
PFDN5-209ENST00000550069 TMEM39BQ9GZU3 492 aa6.33□□□□□ -1.4
PFDN5-209ENST00000550069 RNF41Q9H4P4 317 aaPredicted RBP6.33□□□□□ -1.4
PFDN5-209ENST00000550069 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.33□□□□□ -1.4
PFDN5-209ENST00000550069 FANCLQ9NW38 375 aa6.33□□□□□ -1.4
PFDN5-209ENST00000550069 ANAPC4Q9UJX5 808 aa6.33□□□□□ -1.4
PFDN5-209ENST00000550069 JAG2Q9Y219 1238 aa6.33□□□□□ -1.4
PFDN5-209ENST00000550069 TNPO3Q9Y5L0 923 aaKnown RBP6.33□□□□□ -1.4
PFDN5-209ENST00000550069 LAMA4Q16363 1823 aa6.33□□□□□ -1.4
PFDN5-209ENST00000550069 LOC285556D6RIA3 1793 aa6.33□□□□□ -1.4
PFDN5-209ENST00000550069 GREB1LQ9C091 1923 aaPredicted RBP6.33□□□□□ -1.4
PFDN5-209ENST00000550069 SIPA1L1O43166 1804 aa6.32□□□□□ -1.4
PFDN5-209ENST00000550069 MYPNQ86TC9 1320 aa6.32□□□□□ -1.4
PFDN5-209ENST00000550069 SH3D21A4FU49 640 aa6.32□□□□□ -1.4
PFDN5-209ENST00000550069 PLD2O14939 933 aa6.32□□□□□ -1.4
PFDN5-209ENST00000550069 GPAA1O43292 621 aa6.32□□□□□ -1.4
PFDN5-209ENST00000550069 IGHDP01880 384 aa6.32□□□□□ -1.4
PFDN5-209ENST00000550069 INHBBP09529 407 aa6.32□□□□□ -1.4
PFDN5-209ENST00000550069 FAHP16930 419 aa6.32□□□□□ -1.4
PFDN5-209ENST00000550069 GCLCP48506 637 aaPredicted RBP6.32□□□□□ -1.4
PFDN5-209ENST00000550069 EPHA5P54756 1037 aa6.32□□□□□ -1.4
PFDN5-209ENST00000550069 SLURP1P55000 103 aa6.32□□□□□ -1.4
PFDN5-209ENST00000550069 NKX3-2P78367 333 aa6.32□□□□□ -1.4
PFDN5-209ENST00000550069 VGLL4Q14135 290 aa6.32□□□□□ -1.4
PFDN5-209ENST00000550069 FBLN7Q53RD9 439 aa6.32□□□□□ -1.4
PFDN5-209ENST00000550069 PRR31Q5SQ13 230 aa6.32□□□□□ -1.4
PFDN5-209ENST00000550069 TTC22Q5TAA0 569 aa6.32□□□□□ -1.4
PFDN5-209ENST00000550069 C12orf60Q5U649 245 aa6.32□□□□□ -1.4
PFDN5-209ENST00000550069 C16orf86Q6ZW13 317 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms