RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 MRI1Q9BV20 369 aa5.79□□□□□ -1.48
CCDC38-204ENST00000546816 GREM2Q9H772 168 aa5.79□□□□□ -1.48
CCDC38-204ENST00000546816 UNKLQ9H9P5 680 aaKnown RBP5.79□□□□□ -1.48
CCDC38-204ENST00000546816 SLC17A6Q9P2U8 582 aa5.79□□□□□ -1.48
CCDC38-204ENST00000546816 RNF7Q9UBF6 113 aa5.79□□□□□ -1.48
CCDC38-204ENST00000546816 SIK3Q9Y2K2 1263 aa5.79□□□□□ -1.48
CCDC38-204ENST00000546816 PRSS23O95084 383 aa5.78□□□□□ -1.48
CCDC38-204ENST00000546816 FAPQ12884 760 aa5.78□□□□□ -1.48
CCDC38-204ENST00000546816 AFMIDQ63HM1 303 aa5.78□□□□□ -1.48
CCDC38-204ENST00000546816 LNX2Q8N448 690 aa5.78□□□□□ -1.48
CCDC38-204ENST00000546816 WDR66Q8TBY9 1149 aa5.78□□□□□ -1.48
CCDC38-204ENST00000546816 ACTRT2Q8TDY3 377 aa5.78□□□□□ -1.48
CCDC38-204ENST00000546816 SMG7Q92540 1137 aaKnown RBP5.78□□□□□ -1.48
CCDC38-204ENST00000546816 AHCYL2Q96HN2 611 aaKnown RBP5.78□□□□□ -1.48
CCDC38-204ENST00000546816 DMRT3Q9NQL9 472 aa5.78□□□□□ -1.48
CCDC38-204ENST00000546816 RBM12Q9NTZ6 932 aaKnown RBP5.78□□□□□ -1.48
CCDC38-204ENST00000546816 KCTD5Q9NXV2 234 aa5.78□□□□□ -1.48
CCDC38-204ENST00000546816 AATKQ6ZMQ8 1374 aa5.78□□□□□ -1.48
CCDC38-204ENST00000546816 GPANK1O95872 356 aa5.77□□□□□ -1.49
CCDC38-204ENST00000546816 POMCP01189 267 aa5.77□□□□□ -1.49
CCDC38-204ENST00000546816 ECHS1P30084 290 aa5.77□□□□□ -1.49
CCDC38-204ENST00000546816 MCAMP43121 646 aa5.77□□□□□ -1.49
CCDC38-204ENST00000546816 MTNR1BP49286 362 aa5.77□□□□□ -1.49
CCDC38-204ENST00000546816 PROK1P58294 105 aa5.77□□□□□ -1.49
CCDC38-204ENST00000546816 ERVK-21P61565 698 aa5.77□□□□□ -1.49
CCDC38-204ENST00000546816 HSD11B2P80365 405 aa5.77□□□□□ -1.49
CCDC38-204ENST00000546816 UBXN2BQ14CS0 331 aa5.77□□□□□ -1.49
CCDC38-204ENST00000546816 MUM1L1Q5H9M0 696 aa5.77□□□□□ -1.49
CCDC38-204ENST00000546816 STON2Q8WXE9 905 aa5.77□□□□□ -1.49
CCDC38-204ENST00000546816 C1QTNF7Q9BXJ2 289 aa5.77□□□□□ -1.49
CCDC38-204ENST00000546816 ACE2Q9BYF1 805 aaPredicted RBP5.77□□□□□ -1.49
CCDC38-204ENST00000546816 CCM2LQ9NUG4 571 aaPredicted RBP5.77□□□□□ -1.49
CCDC38-204ENST00000546816 ARPP21Q9UBL0 812 aaPredicted RBP5.77□□□□□ -1.49
CCDC38-204ENST00000546816 IL2RBP14784 551 aa5.76□□□□□ -1.49
CCDC38-204ENST00000546816 SLC6A2P23975 617 aa5.76□□□□□ -1.49
CCDC38-204ENST00000546816 GUCY1A2P33402 732 aa5.76□□□□□ -1.49
CCDC38-204ENST00000546816 ABCG1P45844 678 aa5.76□□□□□ -1.49
CCDC38-204ENST00000546816 VAV2P52735 878 aa5.76□□□□□ -1.49
CCDC38-204ENST00000546816 SEPT2Q15019 361 aa5.76□□□□□ -1.49
CCDC38-204ENST00000546816 EGFLAMQ63HQ2 1017 aa5.76□□□□□ -1.49
CCDC38-204ENST00000546816 OTUD7BQ6GQQ9 843 aa5.76□□□□□ -1.49
CCDC38-204ENST00000546816 SPATS2Q86XZ4 545 aaKnown RBP5.76□□□□□ -1.49
CCDC38-204ENST00000546816 PQLC1Q8N2U9 271 aa5.76□□□□□ -1.49
CCDC38-204ENST00000546816 COG1Q8WTW3 980 aa5.76□□□□□ -1.49
CCDC38-204ENST00000546816 PTCD3Q96EY7 689 aaKnown RBP5.76□□□□□ -1.49
CCDC38-204ENST00000546816 KMT5AQ9NQR1 393 aa5.76□□□□□ -1.49
CCDC38-204ENST00000546816 DNAJC28Q9NX36 388 aa5.76□□□□□ -1.49
CCDC38-204ENST00000546816 USP25Q9UHP3 1055 aa5.76□□□□□ -1.49
CCDC38-204ENST00000546816 WIPF3A6NGB9 483 aa5.75□□□□□ -1.49
CCDC38-204ENST00000546816 PROB1E7EW31 1015 aa5.75□□□□□ -1.49
CCDC38-204ENST00000546816 K7ESF4 209 aa5.75□□□□□ -1.49
CCDC38-204ENST00000546816 GSPT1P15170 499 aaKnown RBP5.75□□□□□ -1.49
CCDC38-204ENST00000546816 CPEP16870 476 aa5.75□□□□□ -1.49
CCDC38-204ENST00000546816 SLC6A9P48067 706 aa5.75□□□□□ -1.49
CCDC38-204ENST00000546816 MALLQ13021 153 aa5.75□□□□□ -1.49
CCDC38-204ENST00000546816 NOMO1Q15155 1222 aa5.75□□□□□ -1.49
CCDC38-204ENST00000546816 GJC2Q5T442 439 aaPredicted RBP5.75□□□□□ -1.49
CCDC38-204ENST00000546816 RNF219Q5W0B1 726 aaPredicted RBP5.75□□□□□ -1.49
CCDC38-204ENST00000546816 FAM180AQ6UWF9 173 aa5.75□□□□□ -1.49
CCDC38-204ENST00000546816 ZNF788Q6ZQV5 615 aa5.75□□□□□ -1.49
CCDC38-204ENST00000546816 LDAHQ9H6V9 325 aa5.75□□□□□ -1.49
CCDC38-204ENST00000546816 FBXO34Q9NWN3 711 aa5.75□□□□□ -1.49
CCDC38-204ENST00000546816 MOCS1Q9NZB8 636 aa5.75□□□□□ -1.49
CCDC38-204ENST00000546816 SLC23A1Q9UHI7 598 aa5.75□□□□□ -1.49
CCDC38-204ENST00000546816 DMTF1Q9Y222 760 aa5.75□□□□□ -1.49
CCDC38-204ENST00000546816 PCDHGA2Q9Y5H1 932 aa5.75□□□□□ -1.49
CCDC38-204ENST00000546816 PHLDB1Q86UU1 1377 aa5.75□□□□□ -1.49
CCDC38-204ENST00000546816 ZFPL1O95159 310 aa5.74□□□□□ -1.49
CCDC38-204ENST00000546816 RAP2AP10114 183 aa5.74□□□□□ -1.49
CCDC38-204ENST00000546816 OSMP13725 252 aa5.74□□□□□ -1.49
CCDC38-204ENST00000546816 ATP5JP18859 108 aa5.74□□□□□ -1.49
CCDC38-204ENST00000546816 FPR1P21462 350 aa5.74□□□□□ -1.49
CCDC38-204ENST00000546816 CNGA1P29973 690 aa5.74□□□□□ -1.49
CCDC38-204ENST00000546816 ALDH1A3P47895 512 aa5.74□□□□□ -1.49
CCDC38-204ENST00000546816 PER3P56645 1201 aa5.74□□□□□ -1.49
CCDC38-204ENST00000546816 KIAA0895LQ68EN5 471 aa5.74□□□□□ -1.49
CCDC38-204ENST00000546816 OR2I1PQ8NGU4 316 aa5.74□□□□□ -1.49
CCDC38-204ENST00000546816 UROC1Q96N76 676 aa5.74□□□□□ -1.49
CCDC38-204ENST00000546816 UHRF1Q96T88 793 aaPredicted RBP5.74□□□□□ -1.49
CCDC38-204ENST00000546816 SLC29A3Q9BZD2 475 aa5.74□□□□□ -1.49
CCDC38-204ENST00000546816 IL17RBQ9NRM6 502 aa5.74□□□□□ -1.49
CCDC38-204ENST00000546816 ASB6Q9NWX5 421 aa5.74□□□□□ -1.49
CCDC38-204ENST00000546816 PRKAB1Q9Y478 270 aa5.74□□□□□ -1.49
CCDC38-204ENST00000546816 ERN1O75460 977 aaKnown RBP5.73□□□□□ -1.49
CCDC38-204ENST00000546816 CLSTN1O94985 981 aa5.73□□□□□ -1.49
CCDC38-204ENST00000546816 CKBP12277 381 aa5.73□□□□□ -1.49
CCDC38-204ENST00000546816 SLC5A3P53794 718 aa5.73□□□□□ -1.49
CCDC38-204ENST00000546816 SRSF4Q08170 494 aaKnown RBP5.73□□□□□ -1.49
CCDC38-204ENST00000546816 MGAT2Q10469 447 aa5.73□□□□□ -1.49
CCDC38-204ENST00000546816 SEM1Q6ZVN7 128 aa5.73□□□□□ -1.49
CCDC38-204ENST00000546816 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.73□□□□□ -1.49
CCDC38-204ENST00000546816 ZNF778Q96MU6 729 aa5.73□□□□□ -1.49
CCDC38-204ENST00000546816 SLC2A13Q96QE2 648 aa5.73□□□□□ -1.49
CCDC38-204ENST00000546816 TIMP4Q99727 224 aa5.73□□□□□ -1.49
CCDC38-204ENST00000546816 MYOCQ99972 504 aa5.73□□□□□ -1.49
CCDC38-204ENST00000546816 HEPHQ9BQS7 1158 aa5.73□□□□□ -1.49
CCDC38-204ENST00000546816 ADI1Q9BV57 179 aa5.73□□□□□ -1.49
CCDC38-204ENST00000546816 SENP6Q9GZR1 1112 aaPredicted RBP5.73□□□□□ -1.49
CCDC38-204ENST00000546816 LANCL2Q9NS86 450 aa5.73□□□□□ -1.49
CCDC38-204ENST00000546816 HSFX1Q9UBD0 423 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms