RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 GIT2Q14161 759 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 SMC1AQ14683 1233 aaKnown RBP8.08□□□□□ -1.12
CPSF7-224ENST00000544990 TLR1Q15399 786 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 ARSHQ5FYA8 562 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 NT5DC1Q5TFE4 455 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 PLPP4Q5VZY2 271 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 Q6ZVU0 165 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 USP49Q70CQ1 688 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 SV2BQ7L1I2 683 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 DDX53Q86TM3 631 aaKnown RBP8.08□□□□□ -1.12
CPSF7-224ENST00000544990 RBM23Q86U06 439 aaKnown RBP8.08□□□□□ -1.12
CPSF7-224ENST00000544990 ZNF280BQ86YH2 543 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 MYCT1Q8N699 235 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 TMEM87AQ8NBN3 555 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 KCNG4Q8TDN1 519 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 IGSF21Q96ID5 467 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 CDCA3Q99618 268 aaPredicted RBP8.08□□□□□ -1.12
CPSF7-224ENST00000544990 ACO2Q99798 780 aaKnown RBP8.08□□□□□ -1.12
CPSF7-224ENST00000544990 TCF25Q9BQ70 676 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 REEP2Q9BRK0 252 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 TCHPQ9BT92 498 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 COLEC11Q9BWP8 271 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 ZHX3Q9H4I2 956 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 TLE6Q9H808 572 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 PARVGQ9HBI0 331 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 SNTG2Q9NY99 539 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 DNAJB4Q9UDY4 337 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 FAM50BQ9Y247 325 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 NPHP3-ACAD11A0A0J9YXS1 232 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 CDK2AP1O14519 115 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 NRP1O14786 923 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 FSCN2O14926 492 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 CUTAO60888 179 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 CXCL14O95715 111 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 THP07101 528 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 SRGAP2BP0DMP2 458 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 STAT6P42226 847 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 OR1G1P47890 313 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 NRIP1P48552 1158 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 SLC11A1P49279 550 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 NDUFV1P49821 464 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 SCNN1GP51170 649 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 AFF1P51825 1210 aaKnown RBP8.07□□□□□ -1.12
CPSF7-224ENST00000544990 YARSP54577 528 aaKnown RBP8.07□□□□□ -1.12
CPSF7-224ENST00000544990 NCKAP1LP55160 1127 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 CLN3Q13286 438 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 ADAM15Q13444 863 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 COL19A1Q14993 1142 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 CTC1Q2NKJ3 1217 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 FOXD4L6Q3SYB3 417 aaPredicted RBP8.07□□□□□ -1.12
CPSF7-224ENST00000544990 LEXMQ3ZCV2 418 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 ZNF568Q3ZCX4 644 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 EEF1DP3Q658K8 133 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 FOXD4L3Q6VB84 417 aaPredicted RBP8.07□□□□□ -1.12
CPSF7-224ENST00000544990 ZPBP2Q6X784 338 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 HAUS6Q7Z4H7 955 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 COLGALT2Q8IYK4 626 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 VPS52Q8N1B4 723 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 EFHBQ8N7U6 833 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 TMEM161BQ8NDZ6 487 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 BICD1Q96G01 975 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 ZFP42Q96MM3 310 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 MKNK1Q9BUB5 465 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 CCDC94Q9BW85 323 aaPredicted RBP8.07□□□□□ -1.12
CPSF7-224ENST00000544990 TARS2Q9BW92 718 aaKnown RBP8.07□□□□□ -1.12
CPSF7-224ENST00000544990 COL25A1Q9BXS0 654 aaPredicted RBP8.07□□□□□ -1.12
CPSF7-224ENST00000544990 PANK2Q9BZ23 570 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 LRRC27Q9C0I9 530 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 ZFAND3Q9H8U3 227 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 TOPORSQ9NS56 1045 aaPredicted RBP8.07□□□□□ -1.12
CPSF7-224ENST00000544990 MIOSQ9NXC5 875 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 KLK14Q9P0G3 267 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 SCHIP1Q9P0W5 487 aaPredicted RBP8.07□□□□□ -1.12
CPSF7-224ENST00000544990 SSX2IPQ9Y2D8 614 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 USP20Q9Y2K6 914 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 GDAQ9Y2T3 454 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 ATP6V1DQ9Y5K8 247 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 TRIP11Q15643 1979 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 TRANK1O15050 2925 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 CITO14578 2027 aa8.07□□□□□ -1.12
CPSF7-224ENST00000544990 K7ENM7 598 aa8.06□□□□□ -1.12
CPSF7-224ENST00000544990 PER2O15055 1255 aa8.06□□□□□ -1.12
CPSF7-224ENST00000544990 CLDN3O15551 220 aa8.06□□□□□ -1.12
CPSF7-224ENST00000544990 TOM1L1O75674 476 aa8.06□□□□□ -1.12
CPSF7-224ENST00000544990 RECQL4O94761 1208 aa8.06□□□□□ -1.12
CPSF7-224ENST00000544990 IL2RAP01589 272 aa8.06□□□□□ -1.12
CPSF7-224ENST00000544990 EDN1P05305 212 aa8.06□□□□□ -1.12
CPSF7-224ENST00000544990 CTSAP10619 480 aa8.06□□□□□ -1.12
CPSF7-224ENST00000544990 MAPTP10636 758 aaKnown RBP8.06□□□□□ -1.12
CPSF7-224ENST00000544990 MCF2P10911 925 aa8.06□□□□□ -1.12
CPSF7-224ENST00000544990 BMP1P13497 986 aa8.06□□□□□ -1.12
CPSF7-224ENST00000544990 TIMP2P16035 220 aa8.06□□□□□ -1.12
CPSF7-224ENST00000544990 GTF2F1P35269 517 aaKnown RBP eCLIP8.06□□□□□ -1.12
CPSF7-224ENST00000544990 MATR3P43243 847 aaKnown RBP eCLIP8.06□□□□□ -1.12
CPSF7-224ENST00000544990 ME1P48163 572 aa8.06□□□□□ -1.12
CPSF7-224ENST00000544990 KCNQ1P51787 676 aa8.06□□□□□ -1.12
CPSF7-224ENST00000544990 ZNF131P52739 623 aa8.06□□□□□ -1.12
CPSF7-224ENST00000544990 AMPD3Q01432 767 aa8.06□□□□□ -1.12
CPSF7-224ENST00000544990 DSC1Q08554 894 aa8.06□□□□□ -1.12
CPSF7-224ENST00000544990 DUSP6Q16828 381 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms