RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 LRRIQ4A6NIV6 560 aa18.92■□□□□ 0.62
SCARB1-208ENST00000544327 ECEL1O95672 775 aa18.92■□□□□ 0.62
SCARB1-208ENST00000544327 CLTAP09496 248 aa18.92■□□□□ 0.62
SCARB1-208ENST00000544327 UBA1P22314 1058 aaKnown RBP18.92■□□□□ 0.62
SCARB1-208ENST00000544327 RRM1P23921 792 aa18.92■□□□□ 0.62
SCARB1-208ENST00000544327 MAN1A1P33908 653 aa18.92■□□□□ 0.62
SCARB1-208ENST00000544327 NSFP46459 744 aaKnown RBP18.92■□□□□ 0.62
SCARB1-208ENST00000544327 CNTN2Q02246 1040 aa18.92■□□□□ 0.62
SCARB1-208ENST00000544327 IFFO1Q0D2I5 559 aa18.92■□□□□ 0.62
SCARB1-208ENST00000544327 FSTL1Q12841 308 aa18.92■□□□□ 0.62
SCARB1-208ENST00000544327 GRM1Q13255 1194 aa18.92■□□□□ 0.62
SCARB1-208ENST00000544327 KCTD19Q17RG1 926 aaPredicted RBP18.92■□□□□ 0.62
SCARB1-208ENST00000544327 DENND2CQ68D51 928 aa18.92■□□□□ 0.62
SCARB1-208ENST00000544327 LMBRD2Q68DH5 695 aaPredicted RBP18.92■□□□□ 0.62
SCARB1-208ENST00000544327 NLRP14Q86W24 1093 aa18.92■□□□□ 0.62
SCARB1-208ENST00000544327 PHF13Q86YI8 300 aaPredicted RBP18.92■□□□□ 0.62
SCARB1-208ENST00000544327 CCDC105Q8IYK2 499 aa18.92■□□□□ 0.62
SCARB1-208ENST00000544327 ANKRD35Q8N283 1001 aa18.92■□□□□ 0.62
SCARB1-208ENST00000544327 MYCBPAPQ8TBZ2 947 aa18.92■□□□□ 0.62
SCARB1-208ENST00000544327 RNF25Q96BH1 459 aaPredicted RBP18.92■□□□□ 0.62
SCARB1-208ENST00000544327 PGM2Q96G03 612 aa18.92■□□□□ 0.62
SCARB1-208ENST00000544327 MSTO1Q9BUK6 570 aa18.92■□□□□ 0.62
SCARB1-208ENST00000544327 CNOT10Q9H9A5 744 aaKnown RBP18.92■□□□□ 0.62
SCARB1-208ENST00000544327 NRBP2Q9NSY0 501 aa18.92■□□□□ 0.62
SCARB1-208ENST00000544327 WHRNQ9P202 907 aa18.92■□□□□ 0.62
SCARB1-208ENST00000544327 SNCAIPQ9Y6H5 919 aa18.92■□□□□ 0.62
SCARB1-208ENST00000544327 FAM169AQ9Y6X4 670 aa18.92■□□□□ 0.62
SCARB1-208ENST00000544327 ADCY3O60266 1144 aa18.91■□□□□ 0.62
SCARB1-208ENST00000544327 SORBS3O60504 671 aa18.91■□□□□ 0.62
SCARB1-208ENST00000544327 FARP2O94887 1054 aaPredicted RBP18.91■□□□□ 0.62
SCARB1-208ENST00000544327 FAM107AO95990 144 aa18.91■□□□□ 0.62
SCARB1-208ENST00000544327 AP3M2P53677 418 aa18.91■□□□□ 0.62
SCARB1-208ENST00000544327 SLC20A2Q08357 652 aa18.91■□□□□ 0.62
SCARB1-208ENST00000544327 LIN9Q5TKA1 542 aa18.91■□□□□ 0.62
SCARB1-208ENST00000544327 ZPBP2Q6X784 338 aa18.91■□□□□ 0.62
SCARB1-208ENST00000544327 C10orf67Q8IYJ2 551 aa18.91■□□□□ 0.62
SCARB1-208ENST00000544327 ABRAQ8N0Z2 381 aa18.91■□□□□ 0.62
SCARB1-208ENST00000544327 ZNF473Q8WTR7 871 aaKnown RBP18.91■□□□□ 0.62
SCARB1-208ENST00000544327 DDX27Q96GQ7 796 aaKnown RBP18.91■□□□□ 0.62
SCARB1-208ENST00000544327 FAM84AQ96KN4 292 aa18.91■□□□□ 0.62
SCARB1-208ENST00000544327 TARS2Q9BW92 718 aaKnown RBP18.91■□□□□ 0.62
SCARB1-208ENST00000544327 CLDN3O15551 220 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 USP2O75604 605 aaPredicted RBP18.9■□□□□ 0.62
SCARB1-208ENST00000544327 PROSCO94903 275 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 CALCAP01258 141 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 RARGP13631 454 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 MAGOHP61326 146 aaKnown RBP18.9■□□□□ 0.62
SCARB1-208ENST00000544327 NOMO3P69849 1222 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 BYSLQ13895 437 aaKnown RBP18.9■□□□□ 0.62
SCARB1-208ENST00000544327 NEDD9Q14511 834 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 FAM160B1Q5W0V3 765 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 SEPT14Q6ZU15 432 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 UBR7Q8N806 425 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 CPA5Q8WXQ8 436 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 ZBTB45Q96K62 511 aaPredicted RBP18.9■□□□□ 0.62
SCARB1-208ENST00000544327 CCT8L2Q96SF2 557 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.9■□□□□ 0.62
SCARB1-208ENST00000544327 A0A087WUV0 522 aaPredicted RBP18.9■□□□□ 0.62
SCARB1-208ENST00000544327 PSTPIP1O43586 416 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 TRAPPC3O43617 180 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 MAFO75444 373 aaPredicted RBP18.9■□□□□ 0.62
SCARB1-208ENST00000544327 TGFB3P10600 412 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 ZNF132P52740 706 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 CAPSQ13938 189 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 ZNF568Q3ZCX4 644 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 SPOPLQ6IQ16 392 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 CENPTQ96BT3 561 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 CYFIP2Q96F07 1278 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 RABEP2Q9H5N1 569 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 BCCIPQ9P287 314 aaKnown RBP eCLIP18.9■□□□□ 0.62
SCARB1-208ENST00000544327 PCDHB4Q9Y5E5 795 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 UMODL1Q5DID0 1318 aa18.9■□□□□ 0.62
SCARB1-208ENST00000544327 SHBGP04278 402 aa18.89■□□□□ 0.61
SCARB1-208ENST00000544327 EDN1P05305 212 aa18.89■□□□□ 0.61
SCARB1-208ENST00000544327 POTEJP0CG39 1038 aa18.89■□□□□ 0.61
SCARB1-208ENST00000544327 HIRAP54198 1017 aaPredicted RBP18.89■□□□□ 0.61
SCARB1-208ENST00000544327 NOP14P78316 857 aaKnown RBP18.89■□□□□ 0.61
SCARB1-208ENST00000544327 C1QBPQ07021 282 aaKnown RBP18.89■□□□□ 0.61
SCARB1-208ENST00000544327 SGO2Q562F6 1265 aa18.89■□□□□ 0.61
SCARB1-208ENST00000544327 ZBTB41Q5SVQ8 909 aa18.89■□□□□ 0.61
SCARB1-208ENST00000544327 PLEKHA7Q6IQ23 1121 aa18.89■□□□□ 0.61
SCARB1-208ENST00000544327 BRSK2Q8IWQ3 736 aa18.89■□□□□ 0.61
SCARB1-208ENST00000544327 TRIM7Q9C029 511 aa18.89■□□□□ 0.61
SCARB1-208ENST00000544327 LRRC4CQ9HCJ2 640 aa18.89■□□□□ 0.61
SCARB1-208ENST00000544327 MRPL47Q9HD33 250 aaKnown RBP18.89■□□□□ 0.61
SCARB1-208ENST00000544327 BTBD7Q9P203 1132 aa18.89■□□□□ 0.61
SCARB1-208ENST00000544327 SOWAHBA6NEL2 793 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 CAND2O75155 1236 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 CPP00450 1065 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 EFNA5P52803 228 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 ADCY2Q08462 1091 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 PTK6Q13882 451 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 ODF2Q5BJF6 829 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 TREML2Q5T2D2 321 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 CDCA2Q69YH5 1023 aaPredicted RBP18.88■□□□□ 0.61
SCARB1-208ENST00000544327 RHBDF2Q6PJF5 856 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 MICALCLQ6ZW33 695 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 RBBP8NLQ8NC74 664 aaPredicted RBP18.88■□□□□ 0.61
SCARB1-208ENST00000544327 FAM167AQ96KS9 214 aa18.88■□□□□ 0.61
SCARB1-208ENST00000544327 SGIP1Q9BQI5 828 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms