RNA–Protein interactions for RNA: ENST00000544179.1

TM7SF3-216, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 2

Gene TM7SF3, Length 412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-216ENST00000544179 SYDE2Q5VT97 1194 aa5.9□□□□□ -1.46
TM7SF3-216ENST00000544179 FOXR2Q6PJQ5 311 aa5.9□□□□□ -1.46
TM7SF3-216ENST00000544179 FITM2Q8N6M3 262 aa5.9□□□□□ -1.46
TM7SF3-216ENST00000544179 JADE3Q92613 823 aa5.9□□□□□ -1.46
TM7SF3-216ENST00000544179 BOD1Q96IK1 185 aa5.9□□□□□ -1.46
TM7SF3-216ENST00000544179 RIOX1Q9H6W3 641 aa5.9□□□□□ -1.46
TM7SF3-216ENST00000544179 PCDH12Q9NPG4 1184 aa5.9□□□□□ -1.46
TM7SF3-216ENST00000544179 COL4A3BPQ9Y5P4 624 aa5.9□□□□□ -1.46
TM7SF3-216ENST00000544179 AATKQ6ZMQ8 1374 aa5.9□□□□□ -1.47
TM7SF3-216ENST00000544179 CCDC78A2IDD5 438 aa5.89□□□□□ -1.47
TM7SF3-216ENST00000544179 KIAA0391O15091 583 aaKnown RBP5.89□□□□□ -1.47
TM7SF3-216ENST00000544179 NDUFS2O75306 463 aa5.89□□□□□ -1.47
TM7SF3-216ENST00000544179 MT-CO1P00395 513 aa5.89□□□□□ -1.47
TM7SF3-216ENST00000544179 CDK11BP21127 795 aaKnown RBP5.89□□□□□ -1.47
TM7SF3-216ENST00000544179 GUCY2FP51841 1108 aa5.89□□□□□ -1.47
TM7SF3-216ENST00000544179 CXADRP78310 365 aa5.89□□□□□ -1.47
TM7SF3-216ENST00000544179 HSD11B2P80365 405 aa5.89□□□□□ -1.47
TM7SF3-216ENST00000544179 GPR149Q86SP6 731 aa5.89□□□□□ -1.47
TM7SF3-216ENST00000544179 RNF31Q96EP0 1072 aa5.89□□□□□ -1.47
TM7SF3-216ENST00000544179 MARS2Q96GW9 593 aaKnown RBP5.89□□□□□ -1.47
TM7SF3-216ENST00000544179 TESQ9UGI8 421 aaKnown RBP5.89□□□□□ -1.47
TM7SF3-216ENST00000544179 TUBD1Q9UJT1 453 aa5.89□□□□□ -1.47
TM7SF3-216ENST00000544179 PCDHA13Q9Y5I0 950 aa5.89□□□□□ -1.47
TM7SF3-216ENST00000544179 CDHR4A6H8M9 788 aa5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 ZAR1LA6NP61 321 aa5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 MYBL2P10244 700 aa5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 C5AR1P21730 350 aa5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 ITKQ08881 620 aa5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 SCAPQ12770 1279 aa5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 FOXI1Q12951 378 aa5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 ATP2B3Q16720 1220 aa5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 DACT2Q5SW24 774 aa5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 RSPH3Q86UC2 560 aa5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 ZNF575Q86XF7 245 aa5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 NLGN4YQ8NFZ3 816 aaPredicted RBP5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 HDAC10Q969S8 669 aa5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 BRINP2Q9C0B6 783 aa5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 CCDC8Q9H0W5 538 aaPredicted RBP5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 C11orf54Q9H0W9 315 aaPredicted RBP5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 SYNPO2LQ9H987 977 aa5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 GALNT9Q9HCQ5 603 aa5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 TMEM74BQ9NUR3 256 aa5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 TDP1Q9NUW8 608 aa5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 USP25Q9UHP3 1055 aa5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 KCNE5Q9UJ90 142 aa5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 TRHDEQ9UKU6 1024 aa5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 MTO1Q9Y2Z2 717 aaKnown RBP5.88□□□□□ -1.47
TM7SF3-216ENST00000544179 KIAA0355O15063 1070 aa5.87□□□□□ -1.47
TM7SF3-216ENST00000544179 PCDHGA12O60330 932 aa5.87□□□□□ -1.47
TM7SF3-216ENST00000544179 ESRRBO95718 433 aa5.87□□□□□ -1.47
TM7SF3-216ENST00000544179 SLC16A1P53985 500 aa5.87□□□□□ -1.47
TM7SF3-216ENST00000544179 CTXN1P60606 82 aa5.87□□□□□ -1.47
TM7SF3-216ENST00000544179 NOMO3P69849 1222 aa5.87□□□□□ -1.47
TM7SF3-216ENST00000544179 MTMR1Q13613 665 aa5.87□□□□□ -1.47
TM7SF3-216ENST00000544179 NOMO2Q5JPE7 1267 aa5.87□□□□□ -1.47
TM7SF3-216ENST00000544179 MIGA2Q7L4E1 593 aa5.87□□□□□ -1.47
TM7SF3-216ENST00000544179 TBC1D15Q8TC07 691 aa5.87□□□□□ -1.47
TM7SF3-216ENST00000544179 NUP133Q8WUM0 1156 aa5.87□□□□□ -1.47
TM7SF3-216ENST00000544179 NACC2Q96BF6 587 aa5.87□□□□□ -1.47
TM7SF3-216ENST00000544179 Q96MF0 132 aa5.87□□□□□ -1.47
TM7SF3-216ENST00000544179 PNKPQ96T60 521 aa5.87□□□□□ -1.47
TM7SF3-216ENST00000544179 PCDHGA9Q9Y5G4 932 aaKnown RBP5.87□□□□□ -1.47
TM7SF3-216ENST00000544179 PCDHGA8Q9Y5G5 932 aa5.87□□□□□ -1.47
TM7SF3-216ENST00000544179 PCDHGA7Q9Y5G6 932 aa5.87□□□□□ -1.47
TM7SF3-216ENST00000544179 PCDHGA6Q9Y5G7 932 aa5.87□□□□□ -1.47
TM7SF3-216ENST00000544179 PCDHGA3Q9Y5H0 932 aa5.87□□□□□ -1.47
TM7SF3-216ENST00000544179 MRFAP1Q9Y605 127 aa5.87□□□□□ -1.47
TM7SF3-216ENST00000544179 MAST3O60307 1309 aa5.86□□□□□ -1.47
TM7SF3-216ENST00000544179 XPOTO43592 962 aaKnown RBP5.86□□□□□ -1.47
TM7SF3-216ENST00000544179 ERN1O75460 977 aaKnown RBP5.86□□□□□ -1.47
TM7SF3-216ENST00000544179 NCLP19338 710 aaKnown RBP5.86□□□□□ -1.47
TM7SF3-216ENST00000544179 MPLP40238 635 aa5.86□□□□□ -1.47
TM7SF3-216ENST00000544179 CDKN1CP49918 316 aaPredicted RBP5.86□□□□□ -1.47
TM7SF3-216ENST00000544179 CDC42EP1Q00587 391 aa5.86□□□□□ -1.47
TM7SF3-216ENST00000544179 TARDBPQ13148 414 aaKnown RBP eCLIP5.86□□□□□ -1.47
TM7SF3-216ENST00000544179 MPP3Q13368 585 aa5.86□□□□□ -1.47
TM7SF3-216ENST00000544179 CYP2A13Q16696 494 aa5.86□□□□□ -1.47
TM7SF3-216ENST00000544179 ABCB5Q2M3G0 1257 aa5.86□□□□□ -1.47
TM7SF3-216ENST00000544179 STRIP1Q5VSL9 837 aa5.86□□□□□ -1.47
TM7SF3-216ENST00000544179 SLC44A3Q8N4M1 653 aa5.86□□□□□ -1.47
TM7SF3-216ENST00000544179 RAB24Q969Q5 203 aa5.86□□□□□ -1.47
TM7SF3-216ENST00000544179 FUBP1Q96AE4 644 aaKnown RBP5.86□□□□□ -1.47
TM7SF3-216ENST00000544179 TMX3Q96JJ7 454 aa5.86□□□□□ -1.47
TM7SF3-216ENST00000544179 TBCCD1Q9NVR7 557 aa5.86□□□□□ -1.47
TM7SF3-216ENST00000544179 HSFX1Q9UBD0 423 aa5.86□□□□□ -1.47
TM7SF3-216ENST00000544179 LIMCH1Q9UPQ0 1083 aa5.86□□□□□ -1.47
TM7SF3-216ENST00000544179 MYADML2A6NDP7 307 aa5.85□□□□□ -1.47
TM7SF3-216ENST00000544179 HTRA2O43464 458 aaPredicted RBP5.85□□□□□ -1.47
TM7SF3-216ENST00000544179 KATNA1O75449 491 aa5.85□□□□□ -1.47
TM7SF3-216ENST00000544179 MTHFD1P11586 935 aaKnown RBP5.85□□□□□ -1.47
TM7SF3-216ENST00000544179 FDXRP22570 491 aa5.85□□□□□ -1.47
TM7SF3-216ENST00000544179 PLA2G5P39877 138 aa5.85□□□□□ -1.47
TM7SF3-216ENST00000544179 PCBP2Q15366 365 aaKnown RBP eCLIP5.85□□□□□ -1.47
TM7SF3-216ENST00000544179 ERCC6LQ2NKX8 1250 aa5.85□□□□□ -1.47
TM7SF3-216ENST00000544179 DPY19L2P1Q6NXN4 242 aa5.85□□□□□ -1.47
TM7SF3-216ENST00000544179 DCBLD1Q8N8Z6 715 aa5.85□□□□□ -1.47
TM7SF3-216ENST00000544179 PRPF38AQ8NAV1 312 aaKnown RBP5.85□□□□□ -1.47
TM7SF3-216ENST00000544179 ZCRB1Q8TBF4 217 aaKnown RBP5.85□□□□□ -1.47
TM7SF3-216ENST00000544179 SLC9A6Q92581 669 aa5.85□□□□□ -1.47
TM7SF3-216ENST00000544179 MED15Q96RN5 788 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms