RNA–Protein interactions for RNA: ENST00000544179.1

TM7SF3-216, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 2

Gene TM7SF3, Length 412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-216ENST00000544179 AEBP2Q6ZN18 517 aaPredicted RBP27.5■■□□□ 1.99
TM7SF3-216ENST00000544179 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
TM7SF3-216ENST00000544179 SENP3Q9H4L4 574 aaPredicted RBP23.39■■□□□ 1.33
TM7SF3-216ENST00000544179 PHF23Q9BUL5 403 aaPredicted RBP23.36■■□□□ 1.33
TM7SF3-216ENST00000544179 FOXD1Q16676 465 aa21.75■■□□□ 1.07
TM7SF3-216ENST00000544179 PLPPR3Q6T4P5 718 aa21.48■■□□□ 1.03
TM7SF3-216ENST00000544179 PPP6R1Q9UPN7 881 aa20.72■□□□□ 0.91
TM7SF3-216ENST00000544179 ADRA2BP18089 450 aa20.69■□□□□ 0.9
TM7SF3-216ENST00000544179 PIAS4Q8N2W9 510 aaPredicted RBP20.44■□□□□ 0.86
TM7SF3-216ENST00000544179 MSH5O43196 834 aa20.16■□□□□ 0.82
TM7SF3-216ENST00000544179 SCAF1Q9H7N4 1312 aaKnown RBP18.95■□□□□ 0.62
TM7SF3-216ENST00000544179 PPP4R3CPQ6ZMV5 832 aa18.9■□□□□ 0.62
TM7SF3-216ENST00000544179 MAPK8IP2Q13387 824 aaPredicted RBP18.86■□□□□ 0.61
TM7SF3-216ENST00000544179 POTEDQ86YR6 584 aa18.85■□□□□ 0.61
TM7SF3-216ENST00000544179 DMRT2Q9Y5R5 561 aa18.63■□□□□ 0.57
TM7SF3-216ENST00000544179 CNKSR2Q8WXI2 1034 aa18.43■□□□□ 0.54
TM7SF3-216ENST00000544179 NCBP3Q53F19 620 aaKnown RBP18.33■□□□□ 0.52
TM7SF3-216ENST00000544179 KCNA4P22459 653 aa18.13■□□□□ 0.49
TM7SF3-216ENST00000544179 RNF216Q9NWF9 866 aaPredicted RBP18.13■□□□□ 0.49
TM7SF3-216ENST00000544179 HOXD11P31277 338 aaPredicted RBP18.12■□□□□ 0.49
TM7SF3-216ENST00000544179 NPM3O75607 178 aaKnown RBP18.05■□□□□ 0.48
TM7SF3-216ENST00000544179 DCAF8L1A6NGE4 600 aa17.86■□□□□ 0.45
TM7SF3-216ENST00000544179 DNAJC5BQ9UF47 199 aa17.54■□□□□ 0.4
TM7SF3-216ENST00000544179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.31■□□□□ 0.36
TM7SF3-216ENST00000544179 RNF39Q9H2S5 420 aa17.24■□□□□ 0.35
TM7SF3-216ENST00000544179 SLC4A1APQ9BWU0 796 aaKnown RBP17.22■□□□□ 0.35
TM7SF3-216ENST00000544179 SLC4A2P04920 1241 aa17.1■□□□□ 0.33
TM7SF3-216ENST00000544179 C1QBPQ07021 282 aaKnown RBP17.04■□□□□ 0.32
TM7SF3-216ENST00000544179 CACNB1Q02641 598 aaPredicted RBP17.02■□□□□ 0.32
TM7SF3-216ENST00000544179 U3KPZ7 1027 aaPredicted RBP16.96■□□□□ 0.31
TM7SF3-216ENST00000544179 FOXD4L1Q9NU39 408 aa16.76■□□□□ 0.27
TM7SF3-216ENST00000544179 MYCNP04198 464 aaPredicted RBP16.68■□□□□ 0.26
TM7SF3-216ENST00000544179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.67■□□□□ 0.26
TM7SF3-216ENST00000544179 HNRNPUL2Q1KMD3 747 aaKnown RBP16.67■□□□□ 0.26
TM7SF3-216ENST00000544179 ZBTB22O15209 634 aa16.66■□□□□ 0.26
TM7SF3-216ENST00000544179 SAMD1Q6SPF0 538 aaPredicted RBP16.6■□□□□ 0.25
TM7SF3-216ENST00000544179 SPINK5Q9NQ38 1064 aaPredicted RBP16.58■□□□□ 0.24
TM7SF3-216ENST00000544179 APLP2Q06481 763 aa16.56■□□□□ 0.24
TM7SF3-216ENST00000544179 CAPN15O75808 1086 aa16.54■□□□□ 0.24
TM7SF3-216ENST00000544179 TRHP20396 242 aaPredicted RBP16.4■□□□□ 0.22
TM7SF3-216ENST00000544179 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
TM7SF3-216ENST00000544179 CSRNP3Q8WYN3 585 aa16.36■□□□□ 0.21
TM7SF3-216ENST00000544179 ZNF219Q9P2Y4 722 aaPredicted RBP16.36■□□□□ 0.21
TM7SF3-216ENST00000544179 DSG3P32926 999 aa16.32■□□□□ 0.2
TM7SF3-216ENST00000544179 ATF5Q9Y2D1 282 aaPredicted RBP16.26■□□□□ 0.19
TM7SF3-216ENST00000544179 ATXN8OSP0DMR3 200 aa16.21■□□□□ 0.19
TM7SF3-216ENST00000544179 ABCB7O75027 752 aa16.2■□□□□ 0.18
TM7SF3-216ENST00000544179 POLA2Q14181 598 aa16.09■□□□□ 0.17
TM7SF3-216ENST00000544179 ZBTB12Q9Y330 459 aaPredicted RBP15.77■□□□□ 0.12
TM7SF3-216ENST00000544179 FBLN2P98095 1184 aa15.61■□□□□ 0.09
TM7SF3-216ENST00000544179 RBM42Q9BTD8 480 aaKnown RBP15.56■□□□□ 0.08
TM7SF3-216ENST00000544179 MKRN4PQ13434 485 aaPredicted RBP15.53■□□□□ 0.08
TM7SF3-216ENST00000544179 OSCARQ8IYS5 282 aa15.5■□□□□ 0.07
TM7SF3-216ENST00000544179 SPDYE2BA6NHP3 402 aa15.32■□□□□ 0.04
TM7SF3-216ENST00000544179 SPDYE6P0CI01 402 aa15.32■□□□□ 0.04
TM7SF3-216ENST00000544179 SPDYE2Q495Y8 402 aa15.32■□□□□ 0.04
TM7SF3-216ENST00000544179 AKT1S1Q96B36 256 aa15.31■□□□□ 0.04
TM7SF3-216ENST00000544179 ZNF692Q9BU19 519 aaPredicted RBP15.24■□□□□ 0.03
TM7SF3-216ENST00000544179 REM2Q8IYK8 340 aaPredicted RBP15.18■□□□□ 0.02
TM7SF3-216ENST00000544179 SSUH2Q9Y2M2 353 aa15.15■□□□□ 0.02
TM7SF3-216ENST00000544179 SPDYE4A6NLX3 237 aa15.07■□□□□ 0
TM7SF3-216ENST00000544179 PABPN1Q86U42 306 aaKnown RBP eCLIP15.03■□□□□ -0
TM7SF3-216ENST00000544179 CHRDL2Q6WN34 429 aa15.02■□□□□ -0
TM7SF3-216ENST00000544179 PITPNM1O00562 1244 aa14.98□□□□□ -0.01
TM7SF3-216ENST00000544179 SPDYE1Q8NFV5 336 aaPredicted RBP14.95□□□□□ -0.02
TM7SF3-216ENST00000544179 CLEC11AQ9Y240 323 aa14.91□□□□□ -0.02
TM7SF3-216ENST00000544179 POTEHQ6S545 545 aa14.88□□□□□ -0.03
TM7SF3-216ENST00000544179 FKBP8Q14318 412 aa14.81□□□□□ -0.04
TM7SF3-216ENST00000544179 PIP4P2Q8N4L2 257 aa14.78□□□□□ -0.04
TM7SF3-216ENST00000544179 FXR2P51116 673 aaKnown RBP eCLIP14.77□□□□□ -0.05
TM7SF3-216ENST00000544179 PRR29P0C7W0 189 aa14.74□□□□□ -0.05
TM7SF3-216ENST00000544179 PROM2Q8N271 834 aa14.74□□□□□ -0.05
TM7SF3-216ENST00000544179 STAG3Q9UJ98 1225 aa14.72□□□□□ -0.05
TM7SF3-216ENST00000544179 PRKAR2AP13861 404 aaKnown RBP14.63□□□□□ -0.07
TM7SF3-216ENST00000544179 CHADLQ6NUI6 762 aa14.55□□□□□ -0.08
TM7SF3-216ENST00000544179 CREBZFQ9NS37 354 aa14.46□□□□□ -0.09
TM7SF3-216ENST00000544179 HAX1O00165 279 aa14.4□□□□□ -0.1
TM7SF3-216ENST00000544179 FARP1Q9Y4F1 1045 aaPredicted RBP14.4□□□□□ -0.1
TM7SF3-216ENST00000544179 FBXO3Q9UK99 471 aa14.38□□□□□ -0.11
TM7SF3-216ENST00000544179 MIER1Q8N108 512 aa14.35□□□□□ -0.11
TM7SF3-216ENST00000544179 PLEKHG5O94827 1062 aa14.29□□□□□ -0.12
TM7SF3-216ENST00000544179 PLCD3Q8N3E9 789 aa14.28□□□□□ -0.12
TM7SF3-216ENST00000544179 C19orf67A6NJJ6 358 aa14.27□□□□□ -0.13
TM7SF3-216ENST00000544179 MNX1P50219 401 aaPredicted RBP14.26□□□□□ -0.13
TM7SF3-216ENST00000544179 EVX2Q03828 476 aa14.24□□□□□ -0.13
TM7SF3-216ENST00000544179 NPM1P06748 294 aaKnown RBP eCLIP14.23□□□□□ -0.13
TM7SF3-216ENST00000544179 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
TM7SF3-216ENST00000544179 SP7Q8TDD2 431 aaPredicted RBP14.17□□□□□ -0.14
TM7SF3-216ENST00000544179 VASPP50552 380 aaPredicted RBP14.16□□□□□ -0.14
TM7SF3-216ENST00000544179 ZBTB47Q9UFB7 747 aaPredicted RBP14.12□□□□□ -0.15
TM7SF3-216ENST00000544179 ZRANB1Q9UGI0 708 aa14.07□□□□□ -0.16
TM7SF3-216ENST00000544179 PAK3O75914 559 aaPredicted RBP14.06□□□□□ -0.16
TM7SF3-216ENST00000544179 KLHL34Q8N239 644 aa14.03□□□□□ -0.16
TM7SF3-216ENST00000544179 TSPYL2Q9H2G4 693 aaPredicted RBP13.99□□□□□ -0.17
TM7SF3-216ENST00000544179 NUBP1P53384 320 aa13.97□□□□□ -0.17
TM7SF3-216ENST00000544179 RASEFQ8IZ41 740 aa13.97□□□□□ -0.17
TM7SF3-216ENST00000544179 IFNLR1Q8IU57 520 aaPredicted RBP13.96□□□□□ -0.17
TM7SF3-216ENST00000544179 ZNF579Q8NAF0 562 aaKnown RBP13.96□□□□□ -0.17
TM7SF3-216ENST00000544179 GABBR2O75899 941 aa13.95□□□□□ -0.18
TM7SF3-216ENST00000544179 CLCN6P51797 869 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms