RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 SPATA24Q86W54 205 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 MPP4Q96JB8 637 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 RBM15Q96T37 977 aaKnown RBP eCLIP13.44□□□□□ -0.26
SMG8-202ENST00000543872 NUP85Q9BW27 656 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 KIAA1586Q9HCI6 787 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 SAR1AQ9NR31 198 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 TYW1Q9NV66 732 aaKnown RBP13.44□□□□□ -0.26
SMG8-202ENST00000543872 ZNF804BA4D1E1 1349 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 OR6B1O95007 311 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 GJC1P36383 396 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 MAGEA4P43358 317 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 DDB1Q16531 1140 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 P3H1Q32P28 736 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 CCDC62Q6P9F0 684 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 ST13P4Q8IZP2 240 aaPredicted RBP13.43□□□□□ -0.26
SMG8-202ENST00000543872 CLPTM1LQ96KA5 538 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 SLC4A9Q96Q91 983 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 TLE6Q9H808 572 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 LGALS13Q9UHV8 139 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 C2CD2LO14523 706 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 TXNDC9O14530 226 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 TBCAO75347 108 aaKnown RBP13.43□□□□□ -0.26
SMG8-202ENST00000543872 CAPN15O75808 1086 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 HOXA7P31268 230 aaPredicted RBP13.43□□□□□ -0.26
SMG8-202ENST00000543872 LSAMPQ13449 338 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 MAP7Q14244 749 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 IZUMO3Q5VZ72 239 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 TTC7BQ86TV6 843 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 ZC3H3Q8IXZ2 948 aaKnown RBP13.43□□□□□ -0.26
SMG8-202ENST00000543872 LRRC47Q8N1G4 583 aaKnown RBP13.43□□□□□ -0.26
SMG8-202ENST00000543872 ZNF564Q8TBZ8 553 aaPredicted RBP13.43□□□□□ -0.26
SMG8-202ENST00000543872 TRAIPQ9BWF2 469 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 RPL26L1Q9UNX3 145 aaKnown RBP13.43□□□□□ -0.26
SMG8-202ENST00000543872 ASTN1O14525 1302 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 MAGEB2O15479 319 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 RNASEH1O60930 286 aaKnown RBP13.43□□□□□ -0.26
SMG8-202ENST00000543872 ADRA1DP25100 572 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 NMT1P30419 496 aaKnown RBP13.43□□□□□ -0.26
SMG8-202ENST00000543872 PSMC2P35998 433 aaKnown RBP13.43□□□□□ -0.26
SMG8-202ENST00000543872 CYP1B1Q16678 543 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 C11orf63Q6NUN7 778 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 DPY19L2Q6NUT2 758 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 TSHZ1Q6ZSZ6 1077 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 AZIN2Q96A70 460 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 KCNQ5Q9NR82 932 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 ZNF212Q9UDV6 495 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 ANGPTL2Q9UKU9 493 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 TMCO1Q9UM00 188 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 DNM3Q9UQ16 869 aa13.43□□□□□ -0.26
SMG8-202ENST00000543872 B2RBV5 119 aa13.42□□□□□ -0.26
SMG8-202ENST00000543872 YY1P25490 414 aa13.42□□□□□ -0.26
SMG8-202ENST00000543872 IVDP26440 423 aa13.42□□□□□ -0.26
SMG8-202ENST00000543872 ARFIP2P53365 341 aa13.42□□□□□ -0.26
SMG8-202ENST00000543872 DSG1Q02413 1049 aa13.42□□□□□ -0.26
SMG8-202ENST00000543872 ORC2Q13416 577 aaPredicted RBP13.42□□□□□ -0.26
SMG8-202ENST00000543872 CTC1Q2NKJ3 1217 aa13.42□□□□□ -0.26
SMG8-202ENST00000543872 MARK2Q7KZI7 788 aaKnown RBP13.42□□□□□ -0.26
SMG8-202ENST00000543872 DENND1AQ8TEH3 1009 aa13.42□□□□□ -0.26
SMG8-202ENST00000543872 CEP95Q96GE4 821 aa13.42□□□□□ -0.26
SMG8-202ENST00000543872 LRRC19Q9H756 370 aa13.42□□□□□ -0.26
SMG8-202ENST00000543872 ANKFY1Q9P2R3 1169 aa13.42□□□□□ -0.26
SMG8-202ENST00000543872 APEX2Q9UBZ4 518 aa13.42□□□□□ -0.26
SMG8-202ENST00000543872 R3HDM2Q9Y2K5 976 aaKnown RBP13.42□□□□□ -0.26
SMG8-202ENST00000543872 CICQ96RK0 1608 aaPredicted RBP13.42□□□□□ -0.26
SMG8-202ENST00000543872 DOCK2Q92608 1830 aa13.42□□□□□ -0.26
SMG8-202ENST00000543872 UBAP1LF5GYI3 381 aa13.42□□□□□ -0.26
SMG8-202ENST00000543872 SLC12A3P55017 1021 aa13.42□□□□□ -0.26
SMG8-202ENST00000543872 TMED1Q13445 227 aa13.42□□□□□ -0.26
SMG8-202ENST00000543872 LRRC6Q86X45 466 aa13.42□□□□□ -0.26
SMG8-202ENST00000543872 RPGRQ92834 1020 aaKnown RBP13.42□□□□□ -0.26
SMG8-202ENST00000543872 ZNF653Q96CK0 615 aa13.42□□□□□ -0.26
SMG8-202ENST00000543872 NR1H4Q96RI1 486 aaPredicted RBP13.42□□□□□ -0.26
SMG8-202ENST00000543872 GPR88Q9GZN0 384 aa13.42□□□□□ -0.26
SMG8-202ENST00000543872 COMMD3-BMI1R4GMX3 469 aa13.42□□□□□ -0.26
SMG8-202ENST00000543872 USP17L15C9J2P7 530 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 USP17L13C9JLJ4 530 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 USP17L11C9JVI0 530 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 USP17L18D6R9N7 530 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 USP17L22D6RA61 530 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 USP17L17D6RBQ6 530 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 USP17L19D6RCP7 530 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 USP17L20D6RJB6 530 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 VAV1P15498 845 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 KRT4P19013 534 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 CDK7P50613 346 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 MYL7Q01449 175 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 USP17L24Q0WX57 530 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 NR1H3Q13133 447 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 USP17L6PQ6QN14 398 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 CLEC10AQ8IUN9 316 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 TSPAN18Q96SJ8 248 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 ECSITQ9BQ95 431 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 BHMT2Q9H2M3 363 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 DDX18Q9NVP1 670 aaKnown RBP13.41□□□□□ -0.26
SMG8-202ENST00000543872 NDE1Q9NXR1 346 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 KANSL3Q9P2N6 904 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 STK10O94804 968 aaKnown RBP13.41□□□□□ -0.26
SMG8-202ENST00000543872 ANPEPP15144 967 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 SLC16A2P36021 539 aa13.41□□□□□ -0.26
SMG8-202ENST00000543872 MTM1Q13496 603 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms