RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 FAM86B2P0C5J1 330 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 GJA1P17302 382 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 CSRP1P21291 193 aaKnown RBP5.33□□□□□ -1.56
LIMS1-214ENST00000542845 AKAP5P24588 427 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 MAPK8P45983 427 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 PDE1AP54750 535 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 NAPAP54920 295 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 ARPP19P56211 112 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 CDC42EP1Q00587 391 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 PRKCEQ02156 737 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 SCAPQ12770 1279 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 ELOAQ14241 798 aaKnown RBP5.33□□□□□ -1.56
LIMS1-214ENST00000542845 SART3Q15020 963 aaKnown RBP5.33□□□□□ -1.56
LIMS1-214ENST00000542845 PLK5Q496M5 336 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 DGKKQ5KSL6 1271 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 UBXN11Q5T124 520 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 JAKMIP3Q5VZ66 844 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 ZNF746Q6NUN9 644 aaPredicted RBP5.33□□□□□ -1.56
LIMS1-214ENST00000542845 VITQ6UXI7 678 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 RALYLQ86SE5 291 aaKnown RBP5.33□□□□□ -1.56
LIMS1-214ENST00000542845 MAP4K3Q8IVH8 894 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 RNF168Q8IYW5 571 aaPredicted RBP5.33□□□□□ -1.56
LIMS1-214ENST00000542845 PLPP7Q8NBV4 271 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 SMG8Q8ND04 991 aaKnown RBP5.33□□□□□ -1.56
LIMS1-214ENST00000542845 FAM174AQ8TBP5 190 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 MDM1Q8TC05 714 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 CPB2Q96IY4 423 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 ZSWIM3Q96MP5 696 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 MBOAT7Q96N66 472 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 ARHGAP9Q9BRR9 750 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 TTPALQ9BTX7 342 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 EIF2AQ9BY44 585 aaKnown RBP5.33□□□□□ -1.56
LIMS1-214ENST00000542845 ANO3Q9BYT9 981 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 DUSP15Q9H1R2 295 aaPredicted RBP5.33□□□□□ -1.56
LIMS1-214ENST00000542845 SLITRK6Q9H5Y7 841 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 CCDC86Q9H6F5 360 aaKnown RBP5.33□□□□□ -1.56
LIMS1-214ENST00000542845 UBN1Q9NPG3 1134 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 TBC1D22BQ9NU19 505 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 PARP2Q9UGN5 583 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 KCNH3Q9ULD8 1083 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 RAXQ9Y2V3 346 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 IPPQ9Y573 584 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 NUP205Q92621 2012 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 THADAQ6YHU6 1953 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 ADAMTS9Q9P2N4 1935 aa5.33□□□□□ -1.56
LIMS1-214ENST00000542845 COL4A2P08572 1712 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 IGF2RP11717 2491 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 SF3B1O75533 1304 aaKnown RBP eCLIP5.32□□□□□ -1.56
LIMS1-214ENST00000542845 BCLAF3A2AJT9 711 aaKnown RBP5.32□□□□□ -1.56
LIMS1-214ENST00000542845 SMCO2A6NFE2 343 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 CASTOR2A6NHX0 329 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 CCDC69A6NI79 296 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 SPECC1L-ADORA2AF8WAN1 911 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 CDX4O14627 284 aaPredicted RBP5.32□□□□□ -1.56
LIMS1-214ENST00000542845 PRRG1O14668 218 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 EFEMP2O95967 443 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 C1RP00736 705 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 FOSP01100 380 aaPredicted RBP5.32□□□□□ -1.56
LIMS1-214ENST00000542845 MYL4P12829 197 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 FCARP24071 287 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 HOXA9P31269 272 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 ELF1P32519 619 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 ADCY7P51828 1080 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 DGKEP52429 567 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 COPS2P61201 443 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 IRX4P78413 519 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 DSC1Q08554 894 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 HSP90AA2PQ14568 343 aaPredicted RBP5.32□□□□□ -1.56
LIMS1-214ENST00000542845 AGERQ15109 404 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 UGCGQ16739 394 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 UVSSAQ2YD98 709 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 CRTC2Q53ET0 693 aaPredicted RBP5.32□□□□□ -1.56
LIMS1-214ENST00000542845 OXLD1Q5BKU9 147 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 WDR44Q5JSH3 913 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 CYP4A22Q5TCH4 519 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 PKN3Q6P5Z2 889 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 TXNDC11Q6PKC3 985 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 BRICD5Q6PL45 260 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 PDZD4Q76G19 769 aaPredicted RBP5.32□□□□□ -1.56
LIMS1-214ENST00000542845 ZNF410Q86VK4 478 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 CDR2LQ86X02 465 aaPredicted RBP5.32□□□□□ -1.56
LIMS1-214ENST00000542845 MFSD6LQ8IWD5 586 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 SCUBE3Q8IX30 993 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 SMAP1Q8IYB5 467 aaPredicted RBP5.32□□□□□ -1.56
LIMS1-214ENST00000542845 ZNF654Q8IZM8 581 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 PNPLA1Q8N8W4 532 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 LNX1Q8TBB1 728 aaPredicted RBP5.32□□□□□ -1.56
LIMS1-214ENST00000542845 PIGKQ92643 395 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 CRELD1Q96HD1 420 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 ZFYVE19Q96K21 471 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 ZC3H10Q96K80 434 aaKnown RBP5.32□□□□□ -1.56
LIMS1-214ENST00000542845 ASB16Q96NS5 453 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 HHIPQ96QV1 700 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 LZTS2Q9BRK4 669 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 PAAF1Q9BRP4 392 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 DSCC1Q9BVC3 393 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 TRIM6Q9C030 488 aaPredicted RBP5.32□□□□□ -1.56
LIMS1-214ENST00000542845 MINDY3Q9H8M7 445 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 DISC1Q9NRI5 854 aa5.32□□□□□ -1.56
LIMS1-214ENST00000542845 AGPAT5Q9NUQ2 364 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms