RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 CYTH3O43739 400 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 SMARCA1P28370 1054 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 PBX3P40426 434 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 BCAR1P56945 870 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 LMNB2Q03252 620 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 NAA30Q147X3 362 aaPredicted RBP9.01□□□□□ -0.97
CLPB-211ENST00000542555 ST3GAL2Q16842 350 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 NFXL1Q6ZNB6 911 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 C15orf39Q6ZRI6 1047 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 ZNF438Q7Z4V0 828 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 FAM228AQ86W67 206 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 ECHDC2Q86YB7 292 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 C1orf210Q8IVY1 113 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 KIAA0319LQ8IZA0 1049 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 NCOA7Q8NI08 942 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 ATRIPQ8WXE1 791 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 TBC1D32Q96NH3 1257 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 MXRA8Q9BRK3 442 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 MKNK1Q9BUB5 465 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 YIPF2Q9BWQ6 316 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 SPZ1Q9BXG8 430 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 TBC1D17Q9HA65 648 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 PIDD1Q9HB75 910 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 ZNF302Q9NR11 478 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 KCNH7Q9NS40 1196 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 PCDHA6Q9UN73 950 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 AKT3Q9Y243 479 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 SSX2IPQ9Y2D8 614 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 PCDHA8Q9Y5H6 950 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 FAM186AA6NE01 2351 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 SALL3Q9BXA9 1300 aa9.01□□□□□ -0.97
CLPB-211ENST00000542555 NT5C1B-RDH14C9J2C7 533 aa9□□□□□ -0.97
CLPB-211ENST00000542555 PDE2AO00408 941 aaPredicted RBP9□□□□□ -0.97
CLPB-211ENST00000542555 TNFRSF10BO14763 440 aa9□□□□□ -0.97
CLPB-211ENST00000542555 LAMTOR5O43504 91 aa9□□□□□ -0.97
CLPB-211ENST00000542555 ZC3H11AO75152 810 aaKnown RBP eCLIP9□□□□□ -0.97
CLPB-211ENST00000542555 SP9P0CG40 484 aa9□□□□□ -0.97
CLPB-211ENST00000542555 CTSAP10619 480 aa9□□□□□ -0.97
CLPB-211ENST00000542555 EPCAMP16422 314 aa9□□□□□ -0.97
CLPB-211ENST00000542555 LETM2Q2VYF4 491 aa9□□□□□ -0.97
CLPB-211ENST00000542555 CASC1Q6TDU7 716 aa9□□□□□ -0.97
CLPB-211ENST00000542555 GLB1LQ6UWU2 654 aa9□□□□□ -0.97
CLPB-211ENST00000542555 CYP26C1Q6V0L0 522 aa9□□□□□ -0.97
CLPB-211ENST00000542555 CYB5R4Q7L1T6 521 aa9□□□□□ -0.97
CLPB-211ENST00000542555 DDX53Q86TM3 631 aaKnown RBP9□□□□□ -0.97
CLPB-211ENST00000542555 TMTC2Q8N394 836 aa9□□□□□ -0.97
CLPB-211ENST00000542555 SMG8Q8ND04 991 aaKnown RBP9□□□□□ -0.97
CLPB-211ENST00000542555 HELQQ8TDG4 1101 aa9□□□□□ -0.97
CLPB-211ENST00000542555 FAM193BQ96PV7 902 aaPredicted RBP9□□□□□ -0.97
CLPB-211ENST00000542555 PCYT2Q99447 389 aa9□□□□□ -0.97
CLPB-211ENST00000542555 MAP3K14Q99558 947 aa9□□□□□ -0.97
CLPB-211ENST00000542555 STIM2Q9P246 746 aa9□□□□□ -0.97
CLPB-211ENST00000542555 IRAK3Q9Y616 596 aa9□□□□□ -0.97
CLPB-211ENST00000542555 SPTBN4Q9H254 2564 aa9□□□□□ -0.97
CLPB-211ENST00000542555 DOCK5Q9H7D0 1870 aa9□□□□□ -0.97
CLPB-211ENST00000542555 CCDC69A6NI79 296 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 DDX39AO00148 427 aaKnown RBP8.99□□□□□ -0.97
CLPB-211ENST00000542555 DDAH1O94760 285 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 FOSP01100 380 aaPredicted RBP8.99□□□□□ -0.97
CLPB-211ENST00000542555 VTNP04004 478 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 DCNP07585 359 aaKnown RBP8.99□□□□□ -0.97
CLPB-211ENST00000542555 CALM1P0DP23 149 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 CALM2P0DP24 149 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 CALM3P0DP25 149 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 SRFP11831 508 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 CES1P23141 567 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 EIF4BP23588 611 aaKnown RBP8.99□□□□□ -0.97
CLPB-211ENST00000542555 NLRP11P59045 1033 aaKnown RBP8.99□□□□□ -0.97
CLPB-211ENST00000542555 CDC42EP1Q00587 391 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 TROAPQ12815 778 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 DSC3Q14574 896 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 PTPN14Q15678 1187 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 PHLDB3Q6NSJ2 640 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 DCLRE1AQ6PJP8 1040 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 LRRC55Q6ZSA7 311 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 TRMT1LQ7Z2T5 733 aaKnown RBP8.99□□□□□ -0.97
CLPB-211ENST00000542555 DCLK2Q8N568 766 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 URGCPQ8TCY9 931 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 SLC22A17Q8WUG5 538 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 FBLIM1Q8WUP2 373 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 TMEM40Q8WWA1 233 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 RUFY2Q8WXA3 655 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 RTKNQ9BST9 563 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 BCO2Q9BYV7 579 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 LNPKQ9C0E8 428 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 ZBP1Q9H171 429 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 MRPL17Q9NRX2 175 aaKnown RBP8.99□□□□□ -0.97
CLPB-211ENST00000542555 TMEM63CQ9P1W3 806 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 GMEB2Q9UKD1 530 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 RAB23Q9ULC3 237 aa8.99□□□□□ -0.97
CLPB-211ENST00000542555 RIF1Q5UIP0 2472 aaKnown RBP8.99□□□□□ -0.97
CLPB-211ENST00000542555 FNDC1Q4ZHG4 1894 aaPredicted RBP8.98□□□□□ -0.97
CLPB-211ENST00000542555 A0A0U1RQF3 1178 aa8.98□□□□□ -0.97
CLPB-211ENST00000542555 ATG7O95352 703 aa8.98□□□□□ -0.97
CLPB-211ENST00000542555 ALDH2P05091 517 aa8.98□□□□□ -0.97
CLPB-211ENST00000542555 URODP06132 367 aa8.98□□□□□ -0.97
CLPB-211ENST00000542555 UBE2SQ16763 222 aa8.98□□□□□ -0.97
CLPB-211ENST00000542555 SWSAP1Q6NVH7 229 aa8.98□□□□□ -0.97
CLPB-211ENST00000542555 EFCAB12Q6NXP0 572 aa8.98□□□□□ -0.97
CLPB-211ENST00000542555 SYNE3Q6ZMZ3 975 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms