RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 VPS37CA5D8V6 355 aaPredicted RBP17.06■□□□□ 0.32
VPS33A-206ENST00000542310 H7C4K7 107 aa17.06■□□□□ 0.32
VPS33A-206ENST00000542310 MEFVO15553 781 aaPredicted RBP17.06■□□□□ 0.32
VPS33A-206ENST00000542310 FAM13AO94988 1023 aa17.06■□□□□ 0.32
VPS33A-206ENST00000542310 CLTAP09496 248 aa17.06■□□□□ 0.32
VPS33A-206ENST00000542310 SLC10A6Q3KNW5 377 aa17.06■□□□□ 0.32
VPS33A-206ENST00000542310 VARS2Q5ST30 1063 aaKnown RBP17.06■□□□□ 0.32
VPS33A-206ENST00000542310 HAUS6Q7Z4H7 955 aa17.06■□□□□ 0.32
VPS33A-206ENST00000542310 GRASPQ7Z6J2 395 aaPredicted RBP17.06■□□□□ 0.32
VPS33A-206ENST00000542310 RASSF8Q8NHQ8 419 aa17.06■□□□□ 0.32
VPS33A-206ENST00000542310 LARP4BQ92615 738 aaKnown RBP17.06■□□□□ 0.32
VPS33A-206ENST00000542310 BICD1Q96G01 975 aa17.06■□□□□ 0.32
VPS33A-206ENST00000542310 SUSD3Q96L08 255 aa17.06■□□□□ 0.32
VPS33A-206ENST00000542310 TSPAN18Q96SJ8 248 aa17.06■□□□□ 0.32
VPS33A-206ENST00000542310 FBXL21Q9UKT6 434 aa17.06■□□□□ 0.32
VPS33A-206ENST00000542310 CDH7Q9ULB5 785 aa17.06■□□□□ 0.32
VPS33A-206ENST00000542310 KCNH3Q9ULD8 1083 aa17.06■□□□□ 0.32
VPS33A-206ENST00000542310 NUB1Q9Y5A7 615 aa17.06■□□□□ 0.32
VPS33A-206ENST00000542310 MORC2Q9Y6X9 1032 aaPredicted RBP17.06■□□□□ 0.32
VPS33A-206ENST00000542310 NPHP3-ACAD11A0A0J9YXS1 232 aa17.05■□□□□ 0.32
VPS33A-206ENST00000542310 I3L4J1 428 aa17.05■□□□□ 0.32
VPS33A-206ENST00000542310 K7ENM7 598 aa17.05■□□□□ 0.32
VPS33A-206ENST00000542310 HNRNPDLO14979 420 aaKnown RBP17.05■□□□□ 0.32
VPS33A-206ENST00000542310 CCL16O15467 120 aa17.05■□□□□ 0.32
VPS33A-206ENST00000542310 TBC1D4O60343 1298 aa17.05■□□□□ 0.32
VPS33A-206ENST00000542310 CXCL8P10145 99 aa17.05■□□□□ 0.32
VPS33A-206ENST00000542310 AOC1P19801 751 aa17.05■□□□□ 0.32
VPS33A-206ENST00000542310 IGFBP6P24592 240 aaPredicted RBP17.05■□□□□ 0.32
VPS33A-206ENST00000542310 LRPAP1P30533 357 aa17.05■□□□□ 0.32
VPS33A-206ENST00000542310 LIG4P49917 911 aa17.05■□□□□ 0.32
VPS33A-206ENST00000542310 ROR1Q01973 937 aa17.05■□□□□ 0.32
VPS33A-206ENST00000542310 CACNB1Q02641 598 aaPredicted RBP17.05■□□□□ 0.32
VPS33A-206ENST00000542310 MRPL58Q14197 206 aaKnown RBP17.05■□□□□ 0.32
VPS33A-206ENST00000542310 KARSQ15046 597 aaKnown RBP17.05■□□□□ 0.32
VPS33A-206ENST00000542310 RSPO2Q6UXX9 243 aaPredicted RBP17.05■□□□□ 0.32
VPS33A-206ENST00000542310 MTSS1LQ765P7 747 aa17.05■□□□□ 0.32
VPS33A-206ENST00000542310 SLC44A3Q8N4M1 653 aa17.05■□□□□ 0.32
VPS33A-206ENST00000542310 LRRC15Q8TF66 581 aa17.05■□□□□ 0.32
VPS33A-206ENST00000542310 C18orf25Q96B23 403 aaPredicted RBP17.05■□□□□ 0.32
VPS33A-206ENST00000542310 RTP3Q9BQQ7 232 aa17.05■□□□□ 0.32
VPS33A-206ENST00000542310 AVENQ9NQS1 362 aaPredicted RBP17.05■□□□□ 0.32
VPS33A-206ENST00000542310 SLC2A4RGQ9NR83 387 aa17.05■□□□□ 0.32
VPS33A-206ENST00000542310 TBX20Q9UMR3 447 aa17.05■□□□□ 0.32
VPS33A-206ENST00000542310 TTC26A0AVF1 554 aa17.04■□□□□ 0.32
VPS33A-206ENST00000542310 ARHGEF37A1IGU5 675 aa17.04■□□□□ 0.32
VPS33A-206ENST00000542310 XPOTO43592 962 aaKnown RBP17.04■□□□□ 0.32
VPS33A-206ENST00000542310 NARSO43776 548 aaKnown RBP17.04■□□□□ 0.32
VPS33A-206ENST00000542310 TBCAO75347 108 aaKnown RBP17.04■□□□□ 0.32
VPS33A-206ENST00000542310 NPR3P17342 541 aa17.04■□□□□ 0.32
VPS33A-206ENST00000542310 CYP3A5P20815 502 aa17.04■□□□□ 0.32
VPS33A-206ENST00000542310 MCM4P33991 863 aa17.04■□□□□ 0.32
VPS33A-206ENST00000542310 MATR3P43243 847 aaKnown RBP eCLIP17.04■□□□□ 0.32
VPS33A-206ENST00000542310 GRIN1Q05586 938 aa17.04■□□□□ 0.32
VPS33A-206ENST00000542310 PPP2R3AQ06190 1150 aa17.04■□□□□ 0.32
VPS33A-206ENST00000542310 ZNF280DQ6N043 979 aa17.04■□□□□ 0.32
VPS33A-206ENST00000542310 SIX5Q8N196 739 aa17.04■□□□□ 0.32
VPS33A-206ENST00000542310 MYCT1Q8N699 235 aa17.04■□□□□ 0.32
VPS33A-206ENST00000542310 APPL2Q8NEU8 664 aa17.04■□□□□ 0.32
VPS33A-206ENST00000542310 ZNF461Q8TAF7 563 aa17.04■□□□□ 0.32
VPS33A-206ENST00000542310 RSAD2Q8WXG1 361 aa17.04■□□□□ 0.32
VPS33A-206ENST00000542310 INTS4Q96HW7 963 aaKnown RBP17.04■□□□□ 0.32
VPS33A-206ENST00000542310 HAPLN2Q9GZV7 340 aa17.04■□□□□ 0.32
VPS33A-206ENST00000542310 STK17AQ9UEE5 414 aa17.04■□□□□ 0.32
VPS33A-206ENST00000542310 MAFFQ9ULX9 164 aa17.04■□□□□ 0.32
VPS33A-206ENST00000542310 UBQLN1Q9UMX0 589 aaKnown RBP17.04■□□□□ 0.32
VPS33A-206ENST00000542310 NUMBLQ9Y6R0 609 aa17.04■□□□□ 0.32
VPS33A-206ENST00000542310 MIA3Q5JRA6 1907 aa17.04■□□□□ 0.32
VPS33A-206ENST00000542310 WDR27A2RRH5 827 aa17.03■□□□□ 0.32
VPS33A-206ENST00000542310 OGTO15294 1046 aa17.03■□□□□ 0.32
VPS33A-206ENST00000542310 TRAK2O60296 914 aa17.03■□□□□ 0.32
VPS33A-206ENST00000542310 FAM189A1O60320 539 aa17.03■□□□□ 0.32
VPS33A-206ENST00000542310 ABLIM3O94929 683 aa17.03■□□□□ 0.32
VPS33A-206ENST00000542310 KRT18P05783 430 aaKnown RBP17.03■□□□□ 0.32
VPS33A-206ENST00000542310 ADRB2P07550 413 aa17.03■□□□□ 0.32
VPS33A-206ENST00000542310 ATF2P15336 505 aa17.03■□□□□ 0.32
VPS33A-206ENST00000542310 MCM6Q14566 821 aa17.03■□□□□ 0.32
VPS33A-206ENST00000542310 PTPAQ15257 358 aa17.03■□□□□ 0.32
VPS33A-206ENST00000542310 PABPC1LQ4VXU2 614 aaKnown RBP17.03■□□□□ 0.32
VPS33A-206ENST00000542310 TPGS2Q68CL5 300 aa17.03■□□□□ 0.32
VPS33A-206ENST00000542310 MAP4K3Q8IVH8 894 aa17.03■□□□□ 0.32
VPS33A-206ENST00000542310 FLCNQ8NFG4 579 aa17.03■□□□□ 0.32
VPS33A-206ENST00000542310 FGF13Q92913 245 aa17.03■□□□□ 0.32
VPS33A-206ENST00000542310 FIZ1Q96SL8 496 aa17.03■□□□□ 0.32
VPS33A-206ENST00000542310 OXCT2Q9BYC2 517 aaPredicted RBP17.03■□□□□ 0.32
VPS33A-206ENST00000542310 ST6GALNAC4Q9H4F1 302 aa17.03■□□□□ 0.32
VPS33A-206ENST00000542310 TUBGCP4Q9UGJ1 667 aa17.03■□□□□ 0.32
VPS33A-206ENST00000542310 PCDHB8Q9UN66 801 aa17.03■□□□□ 0.32
VPS33A-206ENST00000542310 POLIQ9UNA4 740 aa17.03■□□□□ 0.32
VPS33A-206ENST00000542310 USP34Q70CQ2 3546 aa17.03■□□□□ 0.32
VPS33A-206ENST00000542310 CFHP08603 1231 aa17.02■□□□□ 0.32
VPS33A-206ENST00000542310 AARSP49588 968 aaKnown RBP eCLIP17.02■□□□□ 0.32
VPS33A-206ENST00000542310 NTHL1P78549 312 aa17.02■□□□□ 0.32
VPS33A-206ENST00000542310 GTF2BQ00403 316 aa17.02■□□□□ 0.32
VPS33A-206ENST00000542310 RESTQ13127 1097 aa17.02■□□□□ 0.32
VPS33A-206ENST00000542310 ZBTB6Q15916 424 aa17.02■□□□□ 0.32
VPS33A-206ENST00000542310 SEZ6Q53EL9 994 aa17.02■□□□□ 0.32
VPS33A-206ENST00000542310 CD302Q8IX05 232 aa17.02■□□□□ 0.32
VPS33A-206ENST00000542310 CCDC105Q8IYK2 499 aa17.02■□□□□ 0.32
VPS33A-206ENST00000542310 TCEAL8Q8IYN2 117 aa17.02■□□□□ 0.32
VPS33A-206ENST00000542310 DDX12PQ92771 950 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms