RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 SPECC1Q5M775 1068 aa21.75■■□□□ 1.07
DDX11-220ENST00000542244 NPAS3Q8IXF0 933 aa21.75■■□□□ 1.07
DDX11-220ENST00000542244 SPIRE2Q8WWL2 714 aa21.75■■□□□ 1.07
DDX11-220ENST00000542244 KXD1Q9BQD3 176 aa21.75■■□□□ 1.07
DDX11-220ENST00000542244 PLA2G2FQ9BZM2 168 aa21.75■■□□□ 1.07
DDX11-220ENST00000542244 RBM19Q9Y4C8 960 aaKnown RBP21.75■■□□□ 1.07
DDX11-220ENST00000542244 ST18O60284 1047 aa21.74■■□□□ 1.07
DDX11-220ENST00000542244 TNFSF9P41273 254 aa21.74■■□□□ 1.07
DDX11-220ENST00000542244 GUCY2FP51841 1108 aa21.74■■□□□ 1.07
DDX11-220ENST00000542244 MRPL58Q14197 206 aaKnown RBP21.74■■□□□ 1.07
DDX11-220ENST00000542244 NXPE3Q969Y0 559 aa21.74■■□□□ 1.07
DDX11-220ENST00000542244 RTP3Q9BQQ7 232 aa21.74■■□□□ 1.07
DDX11-220ENST00000542244 IRF2BPLQ9H1B7 796 aa21.74■■□□□ 1.07
DDX11-220ENST00000542244 ARHGEF3Q9NR81 526 aa21.74■■□□□ 1.07
DDX11-220ENST00000542244 TOPORSQ9NS56 1045 aaPredicted RBP21.74■■□□□ 1.07
DDX11-220ENST00000542244 DLGAP2Q9P1A6 1054 aa21.74■■□□□ 1.07
DDX11-220ENST00000542244 ABLIM3O94929 683 aa21.73■■□□□ 1.07
DDX11-220ENST00000542244 CXCL8P10145 99 aa21.73■■□□□ 1.07
DDX11-220ENST00000542244 DHX8Q14562 1220 aaKnown RBP21.73■■□□□ 1.07
DDX11-220ENST00000542244 PABPC1LQ4VXU2 614 aaKnown RBP21.73■■□□□ 1.07
DDX11-220ENST00000542244 SLC8B1Q6J4K2 584 aa21.73■■□□□ 1.07
DDX11-220ENST00000542244 PDXDC1Q6P996 788 aa21.73■■□□□ 1.07
DDX11-220ENST00000542244 ANKS3Q6ZW76 656 aa21.73■■□□□ 1.07
DDX11-220ENST00000542244 TCEAL4Q96EI5 215 aa21.73■■□□□ 1.07
DDX11-220ENST00000542244 MCRS1Q96EZ8 462 aa21.73■■□□□ 1.07
DDX11-220ENST00000542244 SLC2A4RGQ9NR83 387 aa21.73■■□□□ 1.07
DDX11-220ENST00000542244 BLOC1S4Q9NUP1 217 aa21.73■■□□□ 1.07
DDX11-220ENST00000542244 FBXL5Q9UKA1 691 aa21.73■■□□□ 1.07
DDX11-220ENST00000542244 MTF2Q9Y483 593 aaPredicted RBP21.73■■□□□ 1.07
DDX11-220ENST00000542244 VPS13AQ96RL7 3174 aa21.73■■□□□ 1.07
DDX11-220ENST00000542244 MYH15Q9Y2K3 1946 aa21.72■■□□□ 1.07
DDX11-220ENST00000542244 CFAP54Q96N23 3096 aa21.72■■□□□ 1.07
DDX11-220ENST00000542244 H3BQV1 296 aa21.72■■□□□ 1.07
DDX11-220ENST00000542244 XYLBO75191 536 aa21.72■■□□□ 1.07
DDX11-220ENST00000542244 TOM1L1O75674 476 aa21.72■■□□□ 1.07
DDX11-220ENST00000542244 RHOP08100 348 aa21.72■■□□□ 1.07
DDX11-220ENST00000542244 CEBPBP17676 345 aa21.72■■□□□ 1.07
DDX11-220ENST00000542244 SNW1Q13573 536 aaKnown RBP21.72■■□□□ 1.07
DDX11-220ENST00000542244 NOLC1Q14978 699 aaKnown RBP eCLIP21.72■■□□□ 1.07
DDX11-220ENST00000542244 UVSSAQ2YD98 709 aa21.72■■□□□ 1.07
DDX11-220ENST00000542244 APBB1IPQ7Z5R6 666 aaPredicted RBP21.72■■□□□ 1.07
DDX11-220ENST00000542244 REEP2Q9BRK0 252 aa21.72■■□□□ 1.07
DDX11-220ENST00000542244 C17orf75Q9HAS0 396 aa21.72■■□□□ 1.07
DDX11-220ENST00000542244 PPEF2O14830 753 aa21.71■■□□□ 1.07
DDX11-220ENST00000542244 TRAPPC3O43617 180 aa21.71■■□□□ 1.07
DDX11-220ENST00000542244 CCR2P41597 374 aa21.71■■□□□ 1.07
DDX11-220ENST00000542244 NCKAP1LP55160 1127 aa21.71■■□□□ 1.07
DDX11-220ENST00000542244 MCL1Q07820 350 aa21.71■■□□□ 1.07
DDX11-220ENST00000542244 SUSD3Q96L08 255 aa21.71■■□□□ 1.07
DDX11-220ENST00000542244 TBC1D32Q96NH3 1257 aa21.71■■□□□ 1.07
DDX11-220ENST00000542244 IKZF4Q9H2S9 585 aa21.71■■□□□ 1.07
DDX11-220ENST00000542244 SLC38A7Q9NVC3 462 aa21.71■■□□□ 1.07
DDX11-220ENST00000542244 TIMM13Q9Y5L4 95 aaPredicted RBP21.71■■□□□ 1.07
DDX11-220ENST00000542244 ARHGEF37A1IGU5 675 aa21.7■■□□□ 1.06
DDX11-220ENST00000542244 FAM189A1O60320 539 aa21.7■■□□□ 1.06
DDX11-220ENST00000542244 VNN2O95498 520 aa21.7■■□□□ 1.06
DDX11-220ENST00000542244 POU2F2P09086 479 aa21.7■■□□□ 1.06
DDX11-220ENST00000542244 CD72P21854 359 aa21.7■■□□□ 1.06
DDX11-220ENST00000542244 STRN3Q13033 797 aa21.7■■□□□ 1.06
DDX11-220ENST00000542244 MCM6Q14566 821 aa21.7■■□□□ 1.06
DDX11-220ENST00000542244 SLC39A4Q6P5W5 647 aa21.7■■□□□ 1.06
DDX11-220ENST00000542244 USP49Q70CQ1 688 aa21.7■■□□□ 1.06
DDX11-220ENST00000542244 HAUS6Q7Z4H7 955 aa21.7■■□□□ 1.06
DDX11-220ENST00000542244 GPBP1Q86WP2 473 aa21.7■■□□□ 1.06
DDX11-220ENST00000542244 HS6ST3Q8IZP7 471 aa21.7■■□□□ 1.06
DDX11-220ENST00000542244 ZNF461Q8TAF7 563 aa21.7■■□□□ 1.06
DDX11-220ENST00000542244 TIPINQ9BVW5 301 aa21.7■■□□□ 1.06
DDX11-220ENST00000542244 NUB1Q9Y5A7 615 aa21.7■■□□□ 1.06
DDX11-220ENST00000542244 R4GN57 208 aa21.7■■□□□ 1.06
DDX11-220ENST00000542244 PDCD11Q14690 1871 aaKnown RBP21.69■■□□□ 1.06
DDX11-220ENST00000542244 TISP43B9A030 160 aa21.69■■□□□ 1.06
DDX11-220ENST00000542244 OR4Q2P0C623 313 aa21.69■■□□□ 1.06
DDX11-220ENST00000542244 RPL9P32969 192 aaKnown RBP21.69■■□□□ 1.06
DDX11-220ENST00000542244 MCM4P33991 863 aa21.69■■□□□ 1.06
DDX11-220ENST00000542244 KARSQ15046 597 aaKnown RBP21.69■■□□□ 1.06
DDX11-220ENST00000542244 ZBTB6Q15916 424 aa21.69■■□□□ 1.06
DDX11-220ENST00000542244 CTXN3Q4LDR2 81 aa21.69■■□□□ 1.06
DDX11-220ENST00000542244 PRSS36Q5K4E3 855 aa21.69■■□□□ 1.06
DDX11-220ENST00000542244 ARL6IP4Q66PJ3 421 aaKnown RBP21.69■■□□□ 1.06
DDX11-220ENST00000542244 TANGO2Q6ICL3 276 aa21.69■■□□□ 1.06
DDX11-220ENST00000542244 PHLDB3Q6NSJ2 640 aa21.69■■□□□ 1.06
DDX11-220ENST00000542244 ZPBP2Q6X784 338 aa21.69■■□□□ 1.06
DDX11-220ENST00000542244 DDX12PQ92771 950 aa21.69■■□□□ 1.06
DDX11-220ENST00000542244 FIZ1Q96SL8 496 aa21.69■■□□□ 1.06
DDX11-220ENST00000542244 CORO1BQ9BR76 489 aa21.69■■□□□ 1.06
DDX11-220ENST00000542244 CYP4F11Q9HBI6 524 aa21.69■■□□□ 1.06
DDX11-220ENST00000542244 SMC3Q9UQE7 1217 aa21.69■■□□□ 1.06
DDX11-220ENST00000542244 MRPS23Q9Y3D9 190 aaKnown RBP21.69■■□□□ 1.06
DDX11-220ENST00000542244 SIT1Q9Y3P8 196 aa21.69■■□□□ 1.06
DDX11-220ENST00000542244 ZFP37Q9Y6Q3 630 aaPredicted RBP21.69■■□□□ 1.06
DDX11-220ENST00000542244 CITO14578 2027 aa21.68■■□□□ 1.06
DDX11-220ENST00000542244 TTC26A0AVF1 554 aa21.68■■□□□ 1.06
DDX11-220ENST00000542244 SHISA7A6NL88 538 aa21.68■■□□□ 1.06
DDX11-220ENST00000542244 LACTBL1A8MY62 500 aa21.68■■□□□ 1.06
DDX11-220ENST00000542244 SYN3O14994 580 aa21.68■■□□□ 1.06
DDX11-220ENST00000542244 CLDN3O15551 220 aa21.68■■□□□ 1.06
DDX11-220ENST00000542244 MOSPD3O75425 235 aa21.68■■□□□ 1.06
DDX11-220ENST00000542244 ATF2P15336 505 aa21.68■■□□□ 1.06
DDX11-220ENST00000542244 PLCG1P19174 1290 aa21.68■■□□□ 1.06
DDX11-220ENST00000542244 FCARP24071 287 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms