RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 PRMT2P55345 433 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 BACE1P56817 501 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 ABCB5Q2M3G0 1257 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 SLC4A8Q2Y0W8 1093 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 PLEKHG6Q3KR16 790 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 TIGD5Q53EQ6 642 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 BRDTQ58F21 947 aaPredicted RBP6.33□□□□□ -1.4
CPSF7-220ENST00000541963 ADGRF1Q5T601 910 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 BTBD8Q5XKL5 378 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 KCTD1Q719H9 257 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 NBPF11Q86T75 865 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 CHD1LQ86WJ1 897 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 SMC5Q8IY18 1101 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 SMCR8Q8TEV9 937 aaPredicted RBP6.33□□□□□ -1.4
CPSF7-220ENST00000541963 SDR42E1Q8WUS8 393 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 CCDC17Q96LX7 622 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 STRBPQ96SI9 672 aaKnown RBP6.33□□□□□ -1.4
CPSF7-220ENST00000541963 RNF32Q9H0A6 362 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 IRF2BPLQ9H1B7 796 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 R3HDMLQ9H3Y0 253 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 SP110Q9HB58 689 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 TOMM22Q9NS69 142 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 ARPP21Q9UBL0 812 aaPredicted RBP6.33□□□□□ -1.4
CPSF7-220ENST00000541963 STAP2Q9UGK3 403 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 ZBTB21Q9ULJ3 1066 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 AGTPBP1Q9UPW5 1226 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 LAMB1P07942 1786 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 FOCADQ5VW36 1801 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 OR14I1A6ND48 311 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 NUDT19A8MXV4 375 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 MPHOSPH10O00566 681 aaKnown RBP6.32□□□□□ -1.4
CPSF7-220ENST00000541963 MAN2B1O00754 1011 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 PRKAB2O43741 272 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 ADAMTS4O75173 837 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 GH2P01242 217 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 IGHDP01880 384 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 CYP17A1P05093 508 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 ID4P47928 161 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 GCLCP48506 637 aaPredicted RBP6.32□□□□□ -1.4
CPSF7-220ENST00000541963 GALK1P51570 392 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 KIF11P52732 1056 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 PDE1AP54750 535 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 SESN3P58005 492 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 ERVFRD-1P60508 538 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 NUCB1Q02818 461 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 TUSC3Q13454 348 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 TMEM132BQ14DG7 1078 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 C12orf60Q5U649 245 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 TSHZ3Q63HK5 1081 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 C17orf99Q6UX52 265 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.32□□□□□ -1.4
CPSF7-220ENST00000541963 ATG4DQ86TL0 474 aaPredicted RBP6.32□□□□□ -1.4
CPSF7-220ENST00000541963 ABI1Q8IZP0 508 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 KIAA1958Q8N8K9 716 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 CD99L2Q8TCZ2 262 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 MTMR8Q96EF0 704 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 CD244Q9BZW8 370 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 SH2D4AQ9H788 454 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 TNFRSF12AQ9NP84 129 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 EMC7Q9NPA0 242 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 KCNH7Q9NS40 1196 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 SPTLC3Q9NUV7 552 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 RIC8BQ9NVN3 520 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 ASH2LQ9UBL3 628 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 FBLN5Q9UBX5 448 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 CPA4Q9UI42 421 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 PTPN22Q9Y2R2 807 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 SPO11Q9Y5K1 396 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 DOCK1Q14185 1865 aa6.32□□□□□ -1.4
CPSF7-220ENST00000541963 MYH7P12883 1935 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 CDK5RAP2Q96SN8 1893 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 HIP1O00291 1037 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 GPAA1O43292 621 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 KATNA1O75449 491 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 HOXA7P31268 230 aaPredicted RBP6.31□□□□□ -1.4
CPSF7-220ENST00000541963 LSP1P33241 339 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 SHMT1P34896 483 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 PSMC4P43686 418 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 TDO2P48775 406 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 HMGCS2P54868 508 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 IRX3P78415 501 aaPredicted RBP6.31□□□□□ -1.4
CPSF7-220ENST00000541963 GABPAQ06546 454 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 MOGSQ13724 837 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 RRP1BQ14684 758 aaKnown RBP6.31□□□□□ -1.4
CPSF7-220ENST00000541963 KCNMB1Q16558 191 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 SBK1Q52WX2 424 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 ODR4Q5SWX8 454 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 ARTNQ5T4W7 220 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 CTR9Q6PD62 1173 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 TMEM179Q6ZVK1 233 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 CCAR1Q8IX12 1150 aaKnown RBP6.31□□□□□ -1.4
CPSF7-220ENST00000541963 ZZZ3Q8IYH5 903 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 ZNF444Q8N0Y2 327 aaPredicted RBP6.31□□□□□ -1.4
CPSF7-220ENST00000541963 OTUD7AQ8TE49 926 aaPredicted RBP6.31□□□□□ -1.4
CPSF7-220ENST00000541963 STAG1Q8WVM7 1258 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 SLC5A5Q92911 643 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 RILPL2Q969X0 211 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 SHISA4Q96DD7 197 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 DDX11Q96FC9 970 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 INTS4Q96HW7 963 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms