RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 HKR1P10072 659 aa5.29□□□□□ -1.56
PRKDC-210ENST00000541488 AVPR1BP47901 424 aa5.29□□□□□ -1.56
PRKDC-210ENST00000541488 NOMO3P69849 1222 aa5.29□□□□□ -1.56
PRKDC-210ENST00000541488 CREMQ03060 361 aa5.29□□□□□ -1.56
PRKDC-210ENST00000541488 MTM1Q13496 603 aa5.29□□□□□ -1.56
PRKDC-210ENST00000541488 NOMO2Q5JPE7 1267 aa5.29□□□□□ -1.56
PRKDC-210ENST00000541488 ZKSCAN2Q63HK3 967 aa5.29□□□□□ -1.56
PRKDC-210ENST00000541488 OTUD7BQ6GQQ9 843 aa5.29□□□□□ -1.56
PRKDC-210ENST00000541488 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.29□□□□□ -1.56
PRKDC-210ENST00000541488 TBC1D15Q8TC07 691 aa5.29□□□□□ -1.56
PRKDC-210ENST00000541488 JADE3Q92613 823 aa5.29□□□□□ -1.56
PRKDC-210ENST00000541488 TMX3Q96JJ7 454 aa5.29□□□□□ -1.56
PRKDC-210ENST00000541488 Q96MF0 132 aa5.29□□□□□ -1.56
PRKDC-210ENST00000541488 RNPEPQ9H4A4 650 aa5.29□□□□□ -1.56
PRKDC-210ENST00000541488 SYBUQ9NX95 663 aa5.29□□□□□ -1.56
PRKDC-210ENST00000541488 TUBD1Q9UJT1 453 aa5.29□□□□□ -1.56
PRKDC-210ENST00000541488 ATP8A1Q9Y2Q0 1164 aa5.29□□□□□ -1.56
PRKDC-210ENST00000541488 SALL3Q9BXA9 1300 aa5.28□□□□□ -1.56
PRKDC-210ENST00000541488 FAM171A2A8MVW0 826 aa5.28□□□□□ -1.56
PRKDC-210ENST00000541488 NDUFS2O75306 463 aa5.28□□□□□ -1.56
PRKDC-210ENST00000541488 EGR2P11161 476 aaPredicted RBP5.28□□□□□ -1.56
PRKDC-210ENST00000541488 ADRA1BP35368 520 aa5.28□□□□□ -1.56
PRKDC-210ENST00000541488 SEC24CP53992 1094 aa5.28□□□□□ -1.56
PRKDC-210ENST00000541488 CXADRP78310 365 aa5.28□□□□□ -1.56
PRKDC-210ENST00000541488 ITKQ08881 620 aa5.28□□□□□ -1.56
PRKDC-210ENST00000541488 FOXR2Q6PJQ5 311 aa5.28□□□□□ -1.56
PRKDC-210ENST00000541488 SEM1Q6ZVN7 128 aa5.28□□□□□ -1.56
PRKDC-210ENST00000541488 RSPH3Q86UC2 560 aa5.28□□□□□ -1.56
PRKDC-210ENST00000541488 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.28□□□□□ -1.56
PRKDC-210ENST00000541488 C1orf162Q8NEQ5 155 aaPredicted RBP5.28□□□□□ -1.56
PRKDC-210ENST00000541488 CASKIN2Q8WXE0 1202 aa5.28□□□□□ -1.56
PRKDC-210ENST00000541488 MTMR8Q96EF0 704 aa5.28□□□□□ -1.56
PRKDC-210ENST00000541488 MANSC1Q9H8J5 431 aa5.28□□□□□ -1.56
PRKDC-210ENST00000541488 SYNPO2LQ9H987 977 aa5.28□□□□□ -1.56
PRKDC-210ENST00000541488 ZNF277Q9NRM2 450 aaPredicted RBP5.28□□□□□ -1.56
PRKDC-210ENST00000541488 TRHDEQ9UKU6 1024 aa5.28□□□□□ -1.56
PRKDC-210ENST00000541488 ZAR1LA6NP61 321 aa5.27□□□□□ -1.57
PRKDC-210ENST00000541488 TEX33O43247 280 aa5.27□□□□□ -1.57
PRKDC-210ENST00000541488 KATNA1O75449 491 aa5.27□□□□□ -1.57
PRKDC-210ENST00000541488 SBK3P0C264 359 aa5.27□□□□□ -1.57
PRKDC-210ENST00000541488 CKBP12277 381 aa5.27□□□□□ -1.57
PRKDC-210ENST00000541488 C5AR1P21730 350 aa5.27□□□□□ -1.57
PRKDC-210ENST00000541488 GCSHP23434 173 aa5.27□□□□□ -1.57
PRKDC-210ENST00000541488 CDKN1CP49918 316 aaPredicted RBP5.27□□□□□ -1.57
PRKDC-210ENST00000541488 SCAPQ12770 1279 aa5.27□□□□□ -1.57
PRKDC-210ENST00000541488 IL10RAQ13651 578 aa5.27□□□□□ -1.57
PRKDC-210ENST00000541488 GJC2Q5T442 439 aaPredicted RBP5.27□□□□□ -1.57
PRKDC-210ENST00000541488 STRIP1Q5VSL9 837 aa5.27□□□□□ -1.57
PRKDC-210ENST00000541488 ABHD17BQ5VST6 288 aa5.27□□□□□ -1.57
PRKDC-210ENST00000541488 CBARPQ8N350 705 aaPredicted RBP5.27□□□□□ -1.57
PRKDC-210ENST00000541488 FITM2Q8N6M3 262 aa5.27□□□□□ -1.57
PRKDC-210ENST00000541488 DCBLD1Q8N8Z6 715 aa5.27□□□□□ -1.57
PRKDC-210ENST00000541488 LINC00476Q8WZB0 136 aa5.27□□□□□ -1.57
PRKDC-210ENST00000541488 NACC2Q96BF6 587 aa5.27□□□□□ -1.57
PRKDC-210ENST00000541488 RSAD1Q9HA92 442 aa5.27□□□□□ -1.57
PRKDC-210ENST00000541488 CASS4Q9NQ75 786 aa5.27□□□□□ -1.57
PRKDC-210ENST00000541488 HSFX1Q9UBD0 423 aa5.27□□□□□ -1.57
PRKDC-210ENST00000541488 PCDHGA12O60330 932 aa5.26□□□□□ -1.57
PRKDC-210ENST00000541488 ZFPL1O95159 310 aa5.26□□□□□ -1.57
PRKDC-210ENST00000541488 CXCR5P32302 372 aa5.26□□□□□ -1.57
PRKDC-210ENST00000541488 CLK3P49761 638 aaKnown RBP5.26□□□□□ -1.57
PRKDC-210ENST00000541488 GUCY2FP51841 1108 aa5.26□□□□□ -1.57
PRKDC-210ENST00000541488 ATP8B2P98198 1209 aa5.26□□□□□ -1.57
PRKDC-210ENST00000541488 TAP1Q03518 808 aa5.26□□□□□ -1.57
PRKDC-210ENST00000541488 TARDBPQ13148 414 aaKnown RBP eCLIP5.26□□□□□ -1.57
PRKDC-210ENST00000541488 MTMR1Q13613 665 aa5.26□□□□□ -1.57
PRKDC-210ENST00000541488 PCBP2Q15366 365 aaKnown RBP eCLIP5.26□□□□□ -1.57
PRKDC-210ENST00000541488 GEN1Q17RS7 908 aa5.26□□□□□ -1.57
PRKDC-210ENST00000541488 MIGA2Q7L4E1 593 aa5.26□□□□□ -1.57
PRKDC-210ENST00000541488 KAT5Q92993 513 aa5.26□□□□□ -1.57
PRKDC-210ENST00000541488 CYFIP2Q96F07 1278 aa5.26□□□□□ -1.57
PRKDC-210ENST00000541488 FAXDC2Q96IV6 333 aa5.26□□□□□ -1.57
PRKDC-210ENST00000541488 PUS7LQ9H0K6 701 aaKnown RBP5.26□□□□□ -1.57
PRKDC-210ENST00000541488 C11orf54Q9H0W9 315 aaPredicted RBP5.26□□□□□ -1.57
PRKDC-210ENST00000541488 TDP1Q9NUW8 608 aa5.26□□□□□ -1.57
PRKDC-210ENST00000541488 PCDHGA9Q9Y5G4 932 aaKnown RBP5.26□□□□□ -1.57
PRKDC-210ENST00000541488 PCDHGA8Q9Y5G5 932 aa5.26□□□□□ -1.57
PRKDC-210ENST00000541488 PCDHGA7Q9Y5G6 932 aa5.26□□□□□ -1.57
PRKDC-210ENST00000541488 PCDHGA6Q9Y5G7 932 aa5.26□□□□□ -1.57
PRKDC-210ENST00000541488 PCDHGA3Q9Y5H0 932 aa5.26□□□□□ -1.57
PRKDC-210ENST00000541488 SBNO2Q9Y2G9 1366 aa5.26□□□□□ -1.57
PRKDC-210ENST00000541488 K7ESF4 209 aa5.25□□□□□ -1.57
PRKDC-210ENST00000541488 FCER1AP12319 257 aa5.25□□□□□ -1.57
PRKDC-210ENST00000541488 ALAS1P13196 640 aa5.25□□□□□ -1.57
PRKDC-210ENST00000541488 FDXRP22570 491 aa5.25□□□□□ -1.57
PRKDC-210ENST00000541488 ZNF280AP59817 542 aaPredicted RBP5.25□□□□□ -1.57
PRKDC-210ENST00000541488 KIF23Q02241 960 aaPredicted RBP5.25□□□□□ -1.57
PRKDC-210ENST00000541488 MPP3Q13368 585 aa5.25□□□□□ -1.57
PRKDC-210ENST00000541488 CYP2A13Q16696 494 aa5.25□□□□□ -1.57
PRKDC-210ENST00000541488 C3orf36Q3SXR2 165 aa5.25□□□□□ -1.57
PRKDC-210ENST00000541488 RNF187Q5TA31 235 aaPredicted RBP5.25□□□□□ -1.57
PRKDC-210ENST00000541488 PTCD3Q96EY7 689 aaKnown RBP5.25□□□□□ -1.57
PRKDC-210ENST00000541488 SMAD5Q99717 465 aaKnown RBP5.25□□□□□ -1.57
PRKDC-210ENST00000541488 TLR10Q9BXR5 811 aa5.25□□□□□ -1.57
PRKDC-210ENST00000541488 SAP30BPQ9UHR5 308 aaKnown RBP5.25□□□□□ -1.57
PRKDC-210ENST00000541488 LIMCH1Q9UPQ0 1083 aa5.25□□□□□ -1.57
PRKDC-210ENST00000541488 CDYLQ9Y232 598 aa5.25□□□□□ -1.57
PRKDC-210ENST00000541488 TRIM75PA6NK02 468 aa5.24□□□□□ -1.57
PRKDC-210ENST00000541488 GRM6O15303 877 aa5.24□□□□□ -1.57
PRKDC-210ENST00000541488 AGFG2O95081 481 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms