RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 FAM213AQ9BRX8 229 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 MKNK1Q9BUB5 465 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 HTATIP2Q9BUP3 242 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 NDST4Q9H3R1 872 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 MMRN2Q9H8L6 949 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 ENAMQ9NRM1 1142 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 DMAC2Q9NW81 257 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 TNFSF13BQ9Y275 285 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 ATP11BQ9Y2G3 1177 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 TRPV2Q9Y5S1 764 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 CDY2AQ9Y6F7 541 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 CEP290O15078 2479 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 MROH7Q68CQ1 1323 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 SCN10AQ9Y5Y9 1956 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 A0A0B4J269 797 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 LGALS16A8MUM7 142 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 MAPK13O15264 365 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 TEX33O43247 280 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 EXTL3O43909 919 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 STX10O60499 249 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 B4GALT4O60513 344 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 TSPAN1O60635 241 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 AFPP02771 609 aaKnown RBP7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 ARF4P18085 180 aaPredicted RBP7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 ACOT2P49753 483 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 VAMP7P51809 220 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 OSTNP61366 133 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 SEZ6Q53EL9 994 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 ZNF385CQ66K41 422 aaPredicted RBP7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 NOTUMQ6P988 496 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 APTXQ7Z2E3 356 aaKnown RBP7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 ANKRD33Q7Z3H0 272 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 TMC6Q7Z403 805 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 RPAINQ86UA6 219 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 PPFIBP1Q86W92 1011 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 CBWD2Q8IUF1 395 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 THNSL1Q8IYQ7 743 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 KDF1Q8NAX2 398 aaPredicted RBP7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 ZSWIM2Q8NEG5 633 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 SCARF2Q96GP6 870 aaPredicted RBP7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 CPB2Q96IY4 423 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 TOX2Q96NM4 488 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 FNBP1Q96RU3 617 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 TRIM6Q9C030 488 aaPredicted RBP7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 CYLDQ9NQC7 956 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 ST3GAL5Q9UNP4 418 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 PIN4Q9Y237 131 aaKnown RBP7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 STYXL1Q9Y6J8 313 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 CNTNAP2Q9UHC6 1331 aa7.21□□□□□ -1.26
CLTCL1-206ENST00000540896 A0A1B0GUA9 196 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 GPR182O15218 404 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 OGTO15294 1046 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 CAND2O75155 1236 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 CLSTN1O94985 981 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 NPTXRO95502 500 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 CD4P01730 458 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 CHRNA1P02708 482 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 EDN1P05305 212 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 ADRB2P07550 413 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 TPM1P09493 284 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 IQCF3P0C7M6 154 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 TRIM49P0CI25 452 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 TRIM49CP0CI26 452 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 DLATP10515 647 aaKnown RBP7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 MCF2P10911 925 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 ZSCAN20P17040 1043 aaPredicted RBP7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 TNNI1P19237 187 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 AXLP30530 894 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 RGS19P49795 217 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 MCL1Q07820 350 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 CYP24A1Q07973 514 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 FAAP100Q0VG06 881 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 CETN1Q12798 172 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 BFSP1Q12934 665 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 PAK2Q13177 524 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 BFSP2Q13515 415 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 NOLC1Q14978 699 aaKnown RBP eCLIP7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 SYCP1Q15431 976 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 SURF1Q15526 300 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 KYAT1Q16773 422 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 PTPN21Q16825 1174 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 ZNF618Q5T7W0 954 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 EEF1DP3Q658K8 133 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 SPECC1LQ69YQ0 1117 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 SLC27A1Q6PCB7 646 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 VSTM4Q8IW00 320 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 FAM126BQ8IXS8 530 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 TMEM174Q8WUU8 243 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 CPLX3Q8WVH0 158 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 TMEM40Q8WWA1 233 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 WNT8BQ93098 351 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 TRIM44Q96DX7 344 aaPredicted RBP7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 MFSD14AQ96MC6 490 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 CDT1Q9H211 546 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 PDZD7Q9H5P4 517 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 RPF1Q9H9Y2 349 aaKnown RBP7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 RBAKQ9NYW8 714 aaPredicted RBP7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 NOC2LQ9Y3T9 749 aaKnown RBP7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms