RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 APOL1O14791 398 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 TAC1P20366 129 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 LHX1P48742 406 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 RGS7P49802 495 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 DEUP1Q05D60 604 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 LAMB3Q13751 1172 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 UHMK1Q8TAS1 419 aaKnown RBP15.04■□□□□ -0
COLCA1-204ENST00000540738 DNAJB3Q8WWF6 145 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 RFFLQ8WZ73 363 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 FDXACB1Q9BRP7 624 aaPredicted RBP15.04■□□□□ -0
COLCA1-204ENST00000540738 FAM49BQ9NUQ9 324 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 ADCYAP1R1P41586 468 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 ZFPM1Q8IX07 1006 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 BAG5Q9UL15 447 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 PSMD3O43242 534 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 IRF1P10914 325 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 ROR1Q01973 937 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 FAM110CQ1W6H9 321 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 PDXDC1Q6P996 788 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 ATP6V0D2Q8N8Y2 350 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 LRRC8CQ8TDW0 803 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 RASSF2P50749 326 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 PRAMEP78395 509 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 RNF25Q96BH1 459 aaPredicted RBP15.03■□□□□ -0
COLCA1-204ENST00000540738 DCUN1D1Q96GG9 259 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 UVRAGQ9P2Y5 699 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 DOLKQ9UPQ8 538 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 HMGCRP04035 888 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 FDPSP14324 419 aaKnown RBP15.03■□□□□ -0
COLCA1-204ENST00000540738 CHSY1Q86X52 802 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 TRIM54Q9BYV2 358 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 PDE11AQ9HCR9 933 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 FMN2Q9NZ56 1722 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 GHRP10912 638 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 PRKAR2AP13861 404 aaKnown RBP15.03■□□□□ -0
COLCA1-204ENST00000540738 CAV1Q03135 178 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 LAMTOR4Q0VGL1 99 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 PTPN21Q16825 1174 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.03■□□□□ -0
COLCA1-204ENST00000540738 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.03■□□□□ -0
COLCA1-204ENST00000540738 IQANK1A0A1B0GTG1 560 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 MCF2P10911 925 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 NPTX2P47972 431 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 CNTN2Q02246 1040 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 TRAPPC11Q7Z392 1133 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 METTL16Q86W50 562 aaKnown RBP15.03■□□□□ -0
COLCA1-204ENST00000540738 EPHB4P54760 987 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 IL9RQ01113 521 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 NECAB2Q7Z6G3 386 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 EPB41L5Q9HCM4 733 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 KLHL14Q9P2G3 628 aa15.03■□□□□ -0
COLCA1-204ENST00000540738 CYB561D2O14569 222 aa15.02■□□□□ -0
COLCA1-204ENST00000540738 XYLBO75191 536 aa15.02■□□□□ -0
COLCA1-204ENST00000540738 KRT37O76014 449 aa15.02■□□□□ -0
COLCA1-204ENST00000540738 TRIP13Q15645 432 aaPredicted RBP15.02■□□□□ -0
COLCA1-204ENST00000540738 GLRA4Q5JXX5 417 aa15.02■□□□□ -0
COLCA1-204ENST00000540738 IL31Q6EBC2 164 aa15.02■□□□□ -0
COLCA1-204ENST00000540738 JADE1Q6IE81 842 aa15.02■□□□□ -0
COLCA1-204ENST00000540738 CNPY4Q8N129 248 aa15.02■□□□□ -0
COLCA1-204ENST00000540738 TSSK1BQ9BXA7 367 aa15.02■□□□□ -0
COLCA1-204ENST00000540738 HEMGNQ9BXL5 484 aa15.02■□□□□ -0
COLCA1-204ENST00000540738 ABCF3Q9NUQ8 709 aa15.02■□□□□ -0
COLCA1-204ENST00000540738 E5RI56 91 aa15.02■□□□□ -0
COLCA1-204ENST00000540738 ZWINTO95229 277 aa15.02■□□□□ -0
COLCA1-204ENST00000540738 CKMP06732 381 aa15.02■□□□□ -0
COLCA1-204ENST00000540738 KCNA4P22459 653 aa15.02■□□□□ -0
COLCA1-204ENST00000540738 STK4Q13043 487 aa15.02■□□□□ -0
COLCA1-204ENST00000540738 GOLGA7BQ2TAP0 167 aa15.02■□□□□ -0
COLCA1-204ENST00000540738 ELOA2Q8IYF1 753 aaPredicted RBP15.02■□□□□ -0
COLCA1-204ENST00000540738 FAM71BQ8TC56 605 aa15.02■□□□□ -0
COLCA1-204ENST00000540738 PALMO75781 387 aa15.02□□□□□ -0.01
COLCA1-204ENST00000540738 GTF2H1P32780 548 aa15.02□□□□□ -0.01
COLCA1-204ENST00000540738 MAP3K21Q5TCX8 1036 aa15.02□□□□□ -0.01
COLCA1-204ENST00000540738 DCLK2Q8N568 766 aa15.02□□□□□ -0.01
COLCA1-204ENST00000540738 ATPAF2Q8N5M1 289 aa15.02□□□□□ -0.01
COLCA1-204ENST00000540738 RABGGTAQ92696 567 aa15.02□□□□□ -0.01
COLCA1-204ENST00000540738 IL17RBQ9NRM6 502 aa15.02□□□□□ -0.01
COLCA1-204ENST00000540738 AGPAT3Q9NRZ7 376 aa15.02□□□□□ -0.01
COLCA1-204ENST00000540738 FZD1Q9UP38 647 aa15.02□□□□□ -0.01
COLCA1-204ENST00000540738 NRCAMQ92823 1304 aa15.02□□□□□ -0.01
COLCA1-204ENST00000540738 ZNF541Q9H0D2 1346 aa15.02□□□□□ -0.01
COLCA1-204ENST00000540738 ARHGEF7Q14155 803 aa15.02□□□□□ -0.01
COLCA1-204ENST00000540738 PIGHQ14442 188 aaPredicted RBP15.02□□□□□ -0.01
COLCA1-204ENST00000540738 SLC27A1Q6PCB7 646 aa15.02□□□□□ -0.01
COLCA1-204ENST00000540738 CABS1Q96KC9 395 aa15.02□□□□□ -0.01
COLCA1-204ENST00000540738 GDAP1L1Q96MZ0 367 aa15.02□□□□□ -0.01
COLCA1-204ENST00000540738 VCXQ9H320 206 aa15.02□□□□□ -0.01
COLCA1-204ENST00000540738 EVI5O60447 810 aa15.01□□□□□ -0.01
COLCA1-204ENST00000540738 GUCY2CP25092 1073 aa15.01□□□□□ -0.01
COLCA1-204ENST00000540738 AVPR1AP37288 418 aa15.01□□□□□ -0.01
COLCA1-204ENST00000540738 CDR2LQ86X02 465 aaPredicted RBP15.01□□□□□ -0.01
COLCA1-204ENST00000540738 HPS3Q969F9 1004 aa15.01□□□□□ -0.01
COLCA1-204ENST00000540738 ALKBH8Q96BT7 664 aaKnown RBP15.01□□□□□ -0.01
COLCA1-204ENST00000540738 RUSC1Q9BVN2 902 aa15.01□□□□□ -0.01
COLCA1-204ENST00000540738 LIMA1Q9UHB6 759 aaKnown RBP15.01□□□□□ -0.01
COLCA1-204ENST00000540738 NRBP1Q9UHY1 535 aa15.01□□□□□ -0.01
COLCA1-204ENST00000540738 SNX2O60749 519 aa15.01□□□□□ -0.01
COLCA1-204ENST00000540738 ATICP31939 592 aa15.01□□□□□ -0.01
COLCA1-204ENST00000540738 FBXO32Q969P5 355 aa15.01□□□□□ -0.01
COLCA1-204ENST00000540738 KIFC3Q9BVG8 833 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms