RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 DOCK6Q96HP0 2047 aa18.27■□□□□ 0.51
PSMD3-204ENST00000540504 CACNA1HO95180 2353 aa18.26■□□□□ 0.51
PSMD3-204ENST00000540504 I3L4J1 428 aa18.26■□□□□ 0.51
PSMD3-204ENST00000540504 GFRA3O60609 400 aa18.26■□□□□ 0.51
PSMD3-204ENST00000540504 HARSP12081 509 aaKnown RBP18.26■□□□□ 0.51
PSMD3-204ENST00000540504 UBA7P41226 1012 aa18.26■□□□□ 0.51
PSMD3-204ENST00000540504 NBL1P41271 181 aa18.26■□□□□ 0.51
PSMD3-204ENST00000540504 NCKAP1LP55160 1127 aa18.26■□□□□ 0.51
PSMD3-204ENST00000540504 KYAT1Q16773 422 aa18.26■□□□□ 0.51
PSMD3-204ENST00000540504 SLC10A6Q3KNW5 377 aa18.26■□□□□ 0.51
PSMD3-204ENST00000540504 VARS2Q5ST30 1063 aaKnown RBP18.26■□□□□ 0.51
PSMD3-204ENST00000540504 CCDC105Q8IYK2 499 aa18.26■□□□□ 0.51
PSMD3-204ENST00000540504 FGF13Q92913 245 aa18.26■□□□□ 0.51
PSMD3-204ENST00000540504 TBC1D32Q96NH3 1257 aa18.26■□□□□ 0.51
PSMD3-204ENST00000540504 PLEKHA5Q9HAU0 1116 aa18.26■□□□□ 0.51
PSMD3-204ENST00000540504 ANKFY1Q9P2R3 1169 aa18.26■□□□□ 0.51
PSMD3-204ENST00000540504 KRBA1A5PL33 1030 aa18.25■□□□□ 0.51
PSMD3-204ENST00000540504 STK25O00506 426 aa18.25■□□□□ 0.51
PSMD3-204ENST00000540504 PI15O43692 258 aa18.25■□□□□ 0.51
PSMD3-204ENST00000540504 TBC1D4O60343 1298 aa18.25■□□□□ 0.51
PSMD3-204ENST00000540504 ABLIM3O94929 683 aa18.25■□□□□ 0.51
PSMD3-204ENST00000540504 RFX1P22670 979 aa18.25■□□□□ 0.51
PSMD3-204ENST00000540504 ELF1P32519 619 aa18.25■□□□□ 0.51
PSMD3-204ENST00000540504 LONP1P36776 959 aaKnown RBP18.25■□□□□ 0.51
PSMD3-204ENST00000540504 NTHL1P78549 312 aa18.25■□□□□ 0.51
PSMD3-204ENST00000540504 ROR1Q01973 937 aa18.25■□□□□ 0.51
PSMD3-204ENST00000540504 MRPL58Q14197 206 aaKnown RBP18.25■□□□□ 0.51
PSMD3-204ENST00000540504 PABPC1LQ4VXU2 614 aaKnown RBP18.25■□□□□ 0.51
PSMD3-204ENST00000540504 ARSHQ5FYA8 562 aa18.25■□□□□ 0.51
PSMD3-204ENST00000540504 PHLDB3Q6NSJ2 640 aa18.25■□□□□ 0.51
PSMD3-204ENST00000540504 HAUS6Q7Z4H7 955 aa18.25■□□□□ 0.51
PSMD3-204ENST00000540504 GPR152Q8TDT2 470 aa18.25■□□□□ 0.51
PSMD3-204ENST00000540504 SUSD3Q96L08 255 aa18.25■□□□□ 0.51
PSMD3-204ENST00000540504 DNMT3BQ9UBC3 853 aaKnown RBP18.25■□□□□ 0.51
PSMD3-204ENST00000540504 ARHGEF37A1IGU5 675 aa18.24■□□□□ 0.51
PSMD3-204ENST00000540504 CLTAP09496 248 aa18.24■□□□□ 0.51
PSMD3-204ENST00000540504 ATF2P15336 505 aa18.24■□□□□ 0.51
PSMD3-204ENST00000540504 ABCD1P33897 745 aa18.24■□□□□ 0.51
PSMD3-204ENST00000540504 MATR3P43243 847 aaKnown RBP eCLIP18.24■□□□□ 0.51
PSMD3-204ENST00000540504 TPGS2Q68CL5 300 aa18.24■□□□□ 0.51
PSMD3-204ENST00000540504 DTWD2Q8NBA8 298 aa18.24■□□□□ 0.51
PSMD3-204ENST00000540504 APPL2Q8NEU8 664 aa18.24■□□□□ 0.51
PSMD3-204ENST00000540504 FGF14Q92915 247 aa18.24■□□□□ 0.51
PSMD3-204ENST00000540504 C18orf25Q96B23 403 aaPredicted RBP18.24■□□□□ 0.51
PSMD3-204ENST00000540504 BICD1Q96G01 975 aa18.24■□□□□ 0.51
PSMD3-204ENST00000540504 AVENQ9NQS1 362 aaPredicted RBP18.24■□□□□ 0.51
PSMD3-204ENST00000540504 ARHGEF3Q9NR81 526 aa18.24■□□□□ 0.51
PSMD3-204ENST00000540504 CA14Q9ULX7 337 aa18.24■□□□□ 0.51
PSMD3-204ENST00000540504 MYH15Q9Y2K3 1946 aa18.23■□□□□ 0.51
PSMD3-204ENST00000540504 NOTCH4Q99466 2003 aa18.23■□□□□ 0.51
PSMD3-204ENST00000540504 NPHP3-ACAD11A0A0J9YXS1 232 aa18.23■□□□□ 0.51
PSMD3-204ENST00000540504 MEFVO15553 781 aaPredicted RBP18.23■□□□□ 0.51
PSMD3-204ENST00000540504 LRG1P02750 347 aa18.23■□□□□ 0.51
PSMD3-204ENST00000540504 MCM4P33991 863 aa18.23■□□□□ 0.51
PSMD3-204ENST00000540504 PARM1Q6UWI2 310 aa18.23■□□□□ 0.51
PSMD3-204ENST00000540504 GPBP1Q86WP2 473 aa18.23■□□□□ 0.51
PSMD3-204ENST00000540504 TCEAL8Q8IYN2 117 aa18.23■□□□□ 0.51
PSMD3-204ENST00000540504 ITFG1Q8TB96 612 aa18.23■□□□□ 0.51
PSMD3-204ENST00000540504 TSPAN18Q96SJ8 248 aa18.23■□□□□ 0.51
PSMD3-204ENST00000540504 REEP2Q9BRK0 252 aa18.23■□□□□ 0.51
PSMD3-204ENST00000540504 TBC1D17Q9HA65 648 aa18.23■□□□□ 0.51
PSMD3-204ENST00000540504 HCFC1R1Q9NWW0 138 aa18.23■□□□□ 0.51
PSMD3-204ENST00000540504 MAFFQ9ULX9 164 aa18.23■□□□□ 0.51
PSMD3-204ENST00000540504 TTC26A0AVF1 554 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 WDR27A2RRH5 827 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 PRRG1O14668 218 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 XPOTO43592 962 aaKnown RBP18.22■□□□□ 0.51
PSMD3-204ENST00000540504 FAM13AO94988 1023 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 PIGRP01833 764 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 CXCL8P10145 99 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 PTPN2P17706 415 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 CYP3A5P20815 502 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 LRPAP1P30533 357 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 LIG4P49917 911 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 ZNF131P52739 623 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 CACNB1Q02641 598 aaPredicted RBP18.22■□□□□ 0.51
PSMD3-204ENST00000540504 CTXN3Q4LDR2 81 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 SEZ6Q53EL9 994 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 ZNF280DQ6N043 979 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 NPAS3Q8IXF0 933 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 SHDQ96IW2 340 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 OXCT2Q9BYC2 517 aaPredicted RBP18.22■□□□□ 0.51
PSMD3-204ENST00000540504 PARVGQ9HBI0 331 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 BLOC1S4Q9NUP1 217 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 GDE1Q9NZC3 331 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 FBXL5Q9UKA1 691 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 TBX20Q9UMR3 447 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 UBQLN1Q9UMX0 589 aaKnown RBP18.22■□□□□ 0.51
PSMD3-204ENST00000540504 PCDHB8Q9UN66 801 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 MRPS23Q9Y3D9 190 aaKnown RBP18.22■□□□□ 0.51
PSMD3-204ENST00000540504 USP34Q70CQ2 3546 aa18.22■□□□□ 0.51
PSMD3-204ENST00000540504 HNRNPDLO14979 420 aaKnown RBP18.21■□□□□ 0.51
PSMD3-204ENST00000540504 TRAK2O60296 914 aa18.21■□□□□ 0.51
PSMD3-204ENST00000540504 RHOP08100 348 aa18.21■□□□□ 0.51
PSMD3-204ENST00000540504 PDCP20941 246 aa18.21■□□□□ 0.51
PSMD3-204ENST00000540504 MARCKSP29966 332 aaPredicted RBP18.21■□□□□ 0.51
PSMD3-204ENST00000540504 STARD6P59095 220 aa18.21■□□□□ 0.51
PSMD3-204ENST00000540504 GPC5P78333 572 aa18.21■□□□□ 0.51
PSMD3-204ENST00000540504 PFKPQ01813 784 aa18.21■□□□□ 0.51
PSMD3-204ENST00000540504 PPP2R3AQ06190 1150 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms