RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 ICA1Q05084 483 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 CACNB2Q08289 660 aaPredicted RBP4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 SCRN1Q12765 414 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 KCNAB2Q13303 367 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 LRRC32Q14392 662 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 PSMD6Q15008 389 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 DDB1Q16531 1140 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 CCNG2Q16589 344 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 KIAA0753Q2KHM9 967 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 KIZQ2M2Z5 673 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 CCDC38Q502W7 563 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 LMBRD2Q68DH5 695 aaPredicted RBP4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 DARS2Q6PI48 645 aaKnown RBP4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 DSTYKQ6XUX3 929 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 NEK10Q6ZWH5 1172 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 THEMISQ8N1K5 641 aaPredicted RBP4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 ARL6IP6Q8N6S5 226 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 C7orf31Q8N865 590 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 PCYOX1LQ8NBM8 494 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 CHST14Q8NCH0 376 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 CLRN3Q8NCR9 226 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 APPL2Q8NEU8 664 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 CENPIQ92674 756 aaPredicted RBP4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 HPS3Q969F9 1004 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 CCDC34Q96HJ3 373 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 CHAMP1Q96JM3 812 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 TEKT5Q96M29 485 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 XPO4Q9C0E2 1151 aaKnown RBP4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 WDR26Q9H7D7 661 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 CHST7Q9NS84 486 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 GFOD1Q9NXC2 390 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 NSMCE4AQ9NXX6 385 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 NTMQ9P121 344 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 SNX5Q9Y5X3 404 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 CHD6Q8TD26 2715 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 NRAPQ86VF7 1730 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 SYNDIG1LA6NDD5 238 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 C19orf81C9J6K1 198 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 FAM47E-STBD1D6RA91 191 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 MEIS1O00470 390 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 FRS3O43559 492 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 NOBOXO60393 691 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 TIPRLO75663 272 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 TUSC2O75896 110 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 GLRX3O76003 335 aaKnown RBP4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 TBC1D8O95759 1140 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 CD3EP07766 207 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 DHRS4L1P0CG22 281 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 MYBP10242 640 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 IDEP14735 1019 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 ACVRL1P37023 503 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 DCTN1Q14203 1278 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 LLGL1Q15334 1064 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 SF1Q15637 639 aaKnown RBP4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 CRY1Q16526 586 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 CCDC158Q5M9N0 1113 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 SLC35F1Q5T1Q4 408 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 E4F1Q66K89 784 aaPredicted RBP4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 PLBD1Q6P4A8 553 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 BORAQ6PGQ7 559 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 ZPBP2Q6X784 338 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 RFX8Q6ZV50 586 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 SPRED1Q7Z699 444 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 BRSK2Q8IWQ3 736 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 AFAP1Q8N556 730 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 OTUD6BQ8N6M0 293 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 ZNF513Q8N8E2 541 aaPredicted RBP4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 NAT16Q8N8M0 369 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 ADAMTS18Q8TE60 1221 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 TRAPPC12Q8WVT3 735 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 SLC5A5Q92911 643 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 FBXW5Q969U6 566 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 KIAA1191Q96A73 305 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 VMP1Q96GC9 406 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 BARD1Q99728 777 aaKnown RBP4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 TREX2Q9BQ50 279 aaPredicted RBP4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 CHCHD6Q9BRQ6 235 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 FAM167BQ9BTA0 163 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 TMEM120AQ9BXJ8 343 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 MRPL9Q9BYD2 267 aaKnown RBP4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 PRDM14Q9GZV8 571 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 PCIF1Q9H4Z3 704 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 CERS4Q9HA82 394 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 UBN1Q9NPG3 1134 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 DMRT3Q9NQL9 472 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 GPR27Q9NS67 375 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 CATSPERZQ9NTU4 200 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 SPTLC3Q9NUV7 552 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 IMPACTQ9P2X3 320 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 B4GALT6Q9UBX8 382 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 CDC23Q9UJX2 597 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 NOC2LQ9Y3T9 749 aaKnown RBP4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 BACE2Q9Y5Z0 518 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 SYNRGQ9UMZ2 1314 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 IRS2Q9Y4H2 1338 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 NRXN3Q9Y4C0 1643 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 NWD2Q9ULI1 1742 aa4.34□□□□□ -1.71
AC055720.1-201ENST00000539552 ATRXP46100 2492 aa4.34□□□□□ -1.72
AC055720.1-201ENST00000539552 CEP290O15078 2479 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 PTPDC1A2A3K4 754 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms