RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 VARS2Q5ST30 1063 aaKnown RBP13.7□□□□□ -0.22
VAMP1-206ENST00000538970 SLC8B1Q6J4K2 584 aa13.7□□□□□ -0.22
VAMP1-206ENST00000538970 MTSS1LQ765P7 747 aa13.7□□□□□ -0.22
VAMP1-206ENST00000538970 NPAS3Q8IXF0 933 aa13.7□□□□□ -0.22
VAMP1-206ENST00000538970 KCNG4Q8TDN1 519 aa13.7□□□□□ -0.22
VAMP1-206ENST00000538970 SPIRE2Q8WWL2 714 aa13.7□□□□□ -0.22
VAMP1-206ENST00000538970 ACAP3Q96P50 834 aa13.7□□□□□ -0.22
VAMP1-206ENST00000538970 PNMA5Q96PV4 448 aa13.7□□□□□ -0.22
VAMP1-206ENST00000538970 NTPCRQ9BSD7 190 aaKnown RBP13.7□□□□□ -0.22
VAMP1-206ENST00000538970 DLGAP2Q9P1A6 1054 aa13.7□□□□□ -0.22
VAMP1-206ENST00000538970 DNMT3BQ9UBC3 853 aaKnown RBP13.7□□□□□ -0.22
VAMP1-206ENST00000538970 KCNH3Q9ULD8 1083 aa13.7□□□□□ -0.22
VAMP1-206ENST00000538970 KIF3AQ9Y496 699 aa13.7□□□□□ -0.22
VAMP1-206ENST00000538970 WDR27A2RRH5 827 aa13.69□□□□□ -0.22
VAMP1-206ENST00000538970 SFI1A8K8P3 1242 aa13.69□□□□□ -0.22
VAMP1-206ENST00000538970 TOM1L1O75674 476 aa13.69□□□□□ -0.22
VAMP1-206ENST00000538970 HARSP12081 509 aaKnown RBP13.69□□□□□ -0.22
VAMP1-206ENST00000538970 PLS3P13797 630 aa13.69□□□□□ -0.22
VAMP1-206ENST00000538970 GPC5P78333 572 aa13.69□□□□□ -0.22
VAMP1-206ENST00000538970 RAD51AP2Q09MP3 1159 aa13.69□□□□□ -0.22
VAMP1-206ENST00000538970 NOLC1Q14978 699 aaKnown RBP eCLIP13.69□□□□□ -0.22
VAMP1-206ENST00000538970 ZRSR1Q15695 479 aaKnown RBP13.69□□□□□ -0.22
VAMP1-206ENST00000538970 MCTP1Q6DN14 999 aa13.69□□□□□ -0.22
VAMP1-206ENST00000538970 KCTD17Q8N5Z5 321 aa13.69□□□□□ -0.22
VAMP1-206ENST00000538970 TMEM161BQ8NDZ6 487 aa13.69□□□□□ -0.22
VAMP1-206ENST00000538970 ZNF461Q8TAF7 563 aa13.69□□□□□ -0.22
VAMP1-206ENST00000538970 C18orf25Q96B23 403 aaPredicted RBP13.69□□□□□ -0.22
VAMP1-206ENST00000538970 TCHPQ9BT92 498 aa13.69□□□□□ -0.22
VAMP1-206ENST00000538970 ANKFY1Q9P2R3 1169 aa13.69□□□□□ -0.22
VAMP1-206ENST00000538970 R4GN57 208 aa13.69□□□□□ -0.22
VAMP1-206ENST00000538970 ARHGEF37A1IGU5 675 aa13.68□□□□□ -0.22
VAMP1-206ENST00000538970 SYN3O14994 580 aa13.68□□□□□ -0.22
VAMP1-206ENST00000538970 TBC1D4O60343 1298 aa13.68□□□□□ -0.22
VAMP1-206ENST00000538970 ABLIM3O94929 683 aa13.68□□□□□ -0.22
VAMP1-206ENST00000538970 DCNP07585 359 aaKnown RBP13.68□□□□□ -0.22
VAMP1-206ENST00000538970 MAPTP10636 758 aaKnown RBP13.68□□□□□ -0.22
VAMP1-206ENST00000538970 RPL9P32969 192 aaKnown RBP13.68□□□□□ -0.22
VAMP1-206ENST00000538970 SLC12A3P55017 1021 aa13.68□□□□□ -0.22
VAMP1-206ENST00000538970 STARD6P59095 220 aa13.68□□□□□ -0.22
VAMP1-206ENST00000538970 STRN3Q13033 797 aa13.68□□□□□ -0.22
VAMP1-206ENST00000538970 PUM1Q14671 1186 aaKnown RBP eCLIP13.68□□□□□ -0.22
VAMP1-206ENST00000538970 SLC5A9Q2M3M2 681 aa13.68□□□□□ -0.22
VAMP1-206ENST00000538970 SPECC1Q5M775 1068 aa13.68□□□□□ -0.22
VAMP1-206ENST00000538970 SYT2Q8N9I0 419 aaPredicted RBP13.68□□□□□ -0.22
VAMP1-206ENST00000538970 PJA1Q8NG27 643 aa13.68□□□□□ -0.22
VAMP1-206ENST00000538970 ING5Q8WYH8 240 aa13.68□□□□□ -0.22
VAMP1-206ENST00000538970 ZBTB45Q96K62 511 aaPredicted RBP13.68□□□□□ -0.22
VAMP1-206ENST00000538970 FOXQ1Q9C009 403 aa13.68□□□□□ -0.22
VAMP1-206ENST00000538970 KCND2Q9NZV8 630 aa13.68□□□□□ -0.22
VAMP1-206ENST00000538970 SIT1Q9Y3P8 196 aa13.68□□□□□ -0.22
VAMP1-206ENST00000538970 NUB1Q9Y5A7 615 aa13.68□□□□□ -0.22
VAMP1-206ENST00000538970 COL4A3Q01955 1670 aa13.68□□□□□ -0.22
VAMP1-206ENST00000538970 CFAP47Q6ZTR5 3102 aa13.68□□□□□ -0.22
VAMP1-206ENST00000538970 VWA3AA6NCI4 1184 aa13.67□□□□□ -0.22
VAMP1-206ENST00000538970 LMNAP02545 664 aaKnown RBP13.67□□□□□ -0.22
VAMP1-206ENST00000538970 RHOP08100 348 aa13.67□□□□□ -0.22
VAMP1-206ENST00000538970 PLA2G4BP0C869 781 aa13.67□□□□□ -0.22
VAMP1-206ENST00000538970 ATF2P15336 505 aa13.67□□□□□ -0.22
VAMP1-206ENST00000538970 GJB2P29033 226 aa13.67□□□□□ -0.22
VAMP1-206ENST00000538970 SMTNP53814 917 aa13.67□□□□□ -0.22
VAMP1-206ENST00000538970 MCL1Q07820 350 aa13.67□□□□□ -0.22
VAMP1-206ENST00000538970 MRPL58Q14197 206 aaKnown RBP13.67□□□□□ -0.22
VAMP1-206ENST00000538970 SLC10A6Q3KNW5 377 aa13.67□□□□□ -0.22
VAMP1-206ENST00000538970 TMEM119Q4V9L6 283 aa13.67□□□□□ -0.22
VAMP1-206ENST00000538970 SEZ6Q53EL9 994 aa13.67□□□□□ -0.22
VAMP1-206ENST00000538970 ARL6IP4Q66PJ3 421 aaKnown RBP13.67□□□□□ -0.22
VAMP1-206ENST00000538970 ZPBP2Q6X784 338 aa13.67□□□□□ -0.22
VAMP1-206ENST00000538970 DCLK2Q8N568 766 aa13.67□□□□□ -0.22
VAMP1-206ENST00000538970 TMX3Q96JJ7 454 aa13.67□□□□□ -0.22
VAMP1-206ENST00000538970 PLIN2Q99541 437 aa13.67□□□□□ -0.22
VAMP1-206ENST00000538970 KXD1Q9BQD3 176 aa13.67□□□□□ -0.22
VAMP1-206ENST00000538970 DDX23Q9BUQ8 820 aaKnown RBP13.67□□□□□ -0.22
VAMP1-206ENST00000538970 AVENQ9NQS1 362 aaPredicted RBP13.67□□□□□ -0.22
VAMP1-206ENST00000538970 DLL3Q9NYJ7 618 aa13.67□□□□□ -0.22
VAMP1-206ENST00000538970 TUBGCP4Q9UGJ1 667 aa13.67□□□□□ -0.22
VAMP1-206ENST00000538970 KCNG1Q9UIX4 513 aa13.67□□□□□ -0.22
VAMP1-206ENST00000538970 FBXL5Q9UKA1 691 aa13.67□□□□□ -0.22
VAMP1-206ENST00000538970 MRPS23Q9Y3D9 190 aaKnown RBP13.67□□□□□ -0.22
VAMP1-206ENST00000538970 MYH15Q9Y2K3 1946 aa13.66□□□□□ -0.22
VAMP1-206ENST00000538970 H7C4K7 107 aa13.66□□□□□ -0.22
VAMP1-206ENST00000538970 PRRG1O14668 218 aa13.66□□□□□ -0.22
VAMP1-206ENST00000538970 LRRN2O75325 713 aa13.66□□□□□ -0.22
VAMP1-206ENST00000538970 CD2BP2O95400 341 aaKnown RBP13.66□□□□□ -0.22
VAMP1-206ENST00000538970 LRG1P02750 347 aa13.66□□□□□ -0.22
VAMP1-206ENST00000538970 GLULP15104 373 aa13.66□□□□□ -0.22
VAMP1-206ENST00000538970 MCM4P33991 863 aa13.66□□□□□ -0.22
VAMP1-206ENST00000538970 NCKAP1LP55160 1127 aa13.66□□□□□ -0.22
VAMP1-206ENST00000538970 ARPP19P56211 112 aa13.66□□□□□ -0.22
VAMP1-206ENST00000538970 CACNB1Q02641 598 aaPredicted RBP13.66□□□□□ -0.22
VAMP1-206ENST00000538970 SNW1Q13573 536 aaKnown RBP13.66□□□□□ -0.22
VAMP1-206ENST00000538970 MLF2Q15773 248 aaPredicted RBP13.66□□□□□ -0.22
VAMP1-206ENST00000538970 POTEHQ6S545 545 aa13.66□□□□□ -0.22
VAMP1-206ENST00000538970 TCEAL8Q8IYN2 117 aa13.66□□□□□ -0.22
VAMP1-206ENST00000538970 KCNN1Q92952 543 aa13.66□□□□□ -0.22
VAMP1-206ENST00000538970 SHDQ96IW2 340 aa13.66□□□□□ -0.22
VAMP1-206ENST00000538970 SUSD3Q96L08 255 aa13.66□□□□□ -0.22
VAMP1-206ENST00000538970 HAPLN2Q9GZV7 340 aa13.66□□□□□ -0.22
VAMP1-206ENST00000538970 GDE1Q9NZC3 331 aa13.66□□□□□ -0.22
VAMP1-206ENST00000538970 INSL5Q9Y5Q6 135 aa13.66□□□□□ -0.22
VAMP1-206ENST00000538970 EP300Q09472 2414 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms