RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 GTF2H1P32780 548 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 SYTL3Q4VX76 610 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 PRAMEF19Q5SWL8 479 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 TRIM42Q8IWZ5 723 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 TTC8Q8TAM2 541 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 GMCL1Q96IK5 515 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 PCDHB8Q9UN66 801 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 MBL2P11226 248 aaPredicted RBP5.66□□□□□ -1.5
LRP6-203ENST00000538239 ZFXP17010 805 aaPredicted RBP5.66□□□□□ -1.5
LRP6-203ENST00000538239 RAP1GAPP47736 663 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 NOP14P78316 857 aaKnown RBP5.66□□□□□ -1.5
LRP6-203ENST00000538239 DPYDQ12882 1025 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 PGM5Q15124 567 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 GRIK4Q16099 956 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 RDM1Q8NG50 284 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 TRPM4Q8TD43 1214 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 CLCA2Q9UQC9 943 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 PCDHAC2Q9Y5I4 1007 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 MYO5BQ9ULV0 1848 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 H0Y626 953 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 CASQ2O14958 399 aaPredicted RBP5.66□□□□□ -1.5
LRP6-203ENST00000538239 NKRFO15226 690 aaKnown RBP eCLIP5.66□□□□□ -1.5
LRP6-203ENST00000538239 HSPA4LO95757 839 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 FAM200BP0CF97 657 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 ARL4DP49703 201 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 FXR2P51116 673 aaKnown RBP eCLIP5.66□□□□□ -1.5
LRP6-203ENST00000538239 EIF3EP60228 445 aaKnown RBP5.66□□□□□ -1.5
LRP6-203ENST00000538239 CHADLQ6NUI6 762 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 MAML1Q92585 1016 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 KAZALD1Q96I82 304 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 SLITRK1Q96PX8 696 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 METTL5Q9NRN9 209 aaKnown RBP5.66□□□□□ -1.5
LRP6-203ENST00000538239 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.66□□□□□ -1.5
LRP6-203ENST00000538239 GTSE1Q9NYZ3 720 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 SLC13A4Q9UKG4 626 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 NFU1Q9UMS0 254 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 REREQ9P2R6 1566 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 GOLGA8QA0A0J9YX86 632 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 GOLGA8OA6NCC3 632 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 SYNDIG1LA6NDD5 238 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 TTLL13PA6NNM8 815 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 MIF4GDA9UHW6 222 aaKnown RBP5.66□□□□□ -1.5
LRP6-203ENST00000538239 RSPH10B2B2RC85 870 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 GOLGA8NF8WBI6 632 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 KPNA6O60684 536 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 TTC4O95801 387 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 KRT14P02533 472 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 SERPIND1P05546 499 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 RSPH10BP0C881 870 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 AKR1A1P14550 325 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 AKT1P31749 480 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 CYP2C19P33261 490 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 ALDH5A1P51649 535 aaPredicted RBP5.66□□□□□ -1.5
LRP6-203ENST00000538239 PPATQ06203 517 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 CTXN3Q4LDR2 81 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 SDCCAG3Q96C92 435 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 POLR3CQ9BUI4 534 aaPredicted RBP5.66□□□□□ -1.5
LRP6-203ENST00000538239 A0A087WZ62 844 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 TTC26A0AVF1 554 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 CYB561D2O14569 222 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 RASGRF2O14827 1237 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 HOXA2O43364 376 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 MED24O75448 989 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 ADCYAP1R1P41586 468 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 SESN3P58005 492 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 ACVR2BQ13705 512 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 ARHGEF7Q14155 803 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 STILQ15468 1287 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 EPC2Q52LR7 807 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 SLC25A41Q8N5S1 370 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 EFHBQ8N7U6 833 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 CFAP61Q8NHU2 1237 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 SYTL5Q8TDW5 730 aaPredicted RBP5.66□□□□□ -1.5
LRP6-203ENST00000538239 ULK4Q96C45 1275 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 FDXACB1Q9BRP7 624 aaPredicted RBP5.66□□□□□ -1.5
LRP6-203ENST00000538239 KIAA1683Q9H0B3 1180 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 WNT8AQ9H1J5 351 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 IL25Q9H293 177 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 EIF3DO15371 548 aaKnown RBP eCLIP5.66□□□□□ -1.55e-6■□□□□ 8.8
LRP6-203ENST00000538239 OCRLQ01968 901 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 TWF1Q12792 350 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 GPAT2Q6NUI2 795 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 CHSY1Q86X52 802 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 PPHLN1Q8NEY8 458 aaKnown RBP5.66□□□□□ -1.5
LRP6-203ENST00000538239 SCG3Q8WXD2 468 aaKnown RBP5.66□□□□□ -1.5
LRP6-203ENST00000538239 TTC17Q96AE7 1141 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 MTMR12Q9C0I1 747 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 TSPYL2Q9H2G4 693 aaPredicted RBP5.66□□□□□ -1.5
LRP6-203ENST00000538239 TMEM8AQ9HCN3 771 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 RNF14Q9UBS8 474 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 UBQLN1Q9UMX0 589 aaKnown RBP5.66□□□□□ -1.5
LRP6-203ENST00000538239 HPS5Q9UPZ3 1129 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 FAN1Q9Y2M0 1017 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 ADCY3O60266 1144 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 AMHP03971 560 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 GHRP10912 638 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 KCNA1Q09470 495 aa5.65□□□□□ -1.5
LRP6-203ENST00000538239 LBRQ14739 615 aaKnown RBP5.65□□□□□ -1.5
LRP6-203ENST00000538239 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.65□□□□□ -1.5
LRP6-203ENST00000538239 GJB7Q6PEY0 223 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms