RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 TLR3O15455 904 aaKnown RBP9.29□□□□□ -0.92
UBE3B-208ENST00000538070 EXTL3O43909 919 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 PHF2O75151 1096 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 PIAS1O75925 651 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 EDN1P05305 212 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 VIMP08670 466 aaKnown RBP9.29□□□□□ -0.92
UBE3B-208ENST00000538070 RPS12P25398 132 aaKnown RBP9.29□□□□□ -0.92
UBE3B-208ENST00000538070 CTNNA2P26232 953 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 MYL6P60660 151 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 SMTNL2Q2TAL5 461 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 ZNF365Q70YC5 407 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 APOBEC3FQ8IUX4 373 aaKnown RBP9.29□□□□□ -0.92
UBE3B-208ENST00000538070 SH3GL2Q99962 352 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 HAPLN2Q9GZV7 340 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 ZWILCHQ9H900 591 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 APOBEC3GQ9HC16 384 aaKnown RBP9.29□□□□□ -0.92
UBE3B-208ENST00000538070 TMBIM4Q9HC24 238 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 FEZ2Q9UHY8 353 aaPredicted RBP9.29□□□□□ -0.92
UBE3B-208ENST00000538070 GREB1LQ9C091 1923 aaPredicted RBP9.29□□□□□ -0.92
UBE3B-208ENST00000538070 DNAH12Q6ZR08 3092 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 MIF4GDA9UHW6 222 aaKnown RBP9.28□□□□□ -0.92
UBE3B-208ENST00000538070 B4GALT5O43286 388 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 TMEM191BP0C7N4 346 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 GTF2H1P32780 548 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 COILP38432 576 aaPredicted RBP9.28□□□□□ -0.92
UBE3B-208ENST00000538070 MDH1P40925 334 aaKnown RBP9.28□□□□□ -0.92
UBE3B-208ENST00000538070 CDH8P55286 799 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 NFIL3Q16649 462 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 LIN9Q5TKA1 542 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 RASGEF1CQ8N431 466 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 C1orf131Q8NDD1 294 aaKnown RBP9.28□□□□□ -0.92
UBE3B-208ENST00000538070 SLC16A10Q8TF71 515 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 THOC1Q96FV9 657 aaKnown RBP9.28□□□□□ -0.92
UBE3B-208ENST00000538070 C9orf72Q96LT7 481 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 CCT8L2Q96SF2 557 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 RNF181Q9P0P0 153 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 GTF3C4Q9UKN8 822 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 CLEC11AQ9Y240 323 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 R3HDM2Q9Y2K5 976 aaKnown RBP9.28□□□□□ -0.92
UBE3B-208ENST00000538070 AFG3L2Q9Y4W6 797 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 HMGB1P1B2RPK0 211 aaPredicted RBP9.28□□□□□ -0.92
UBE3B-208ENST00000538070 C19orf81C9J6K1 198 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 LYPLA2O95372 231 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 ANXA13P27216 316 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 RPL7AP62424 266 aaKnown RBP9.28□□□□□ -0.92
UBE3B-208ENST00000538070 TMEM62Q0P6H9 643 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 MTMR3Q13615 1198 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 CLEC16AQ2KHT3 1053 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 SPATA33Q96N06 139 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 SYT11Q9BT88 431 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 WNT8AQ9H1J5 351 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 GPRC5DQ9NZD1 345 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 PCSK1NQ9UHG2 260 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 ZNF148Q9UQR1 794 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 PASKQ96RG2 1323 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 GOLGA6L7A0A1B0GV03 622 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 SPATA31C2B4DYI2 1134 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 P4HA2O15460 535 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 TCF4P15884 667 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 RFX1P22670 979 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 ALDH5A1P51649 535 aaPredicted RBP9.28□□□□□ -0.92
UBE3B-208ENST00000538070 GPC3P51654 580 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 CUL2Q13617 745 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 CAPSQ13938 189 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 KYNUQ16719 465 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 KCNT1Q5JUK3 1230 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 NLRP14Q86W24 1093 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 MCOLN2Q8IZK6 566 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 MCEEQ96PE7 176 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 HERPUD2Q9BSE4 406 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 PLVAPQ9BX97 442 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 MTFR1LQ9H019 292 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 PDGFCQ9NRA1 345 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 SAE1Q9UBE0 346 aaPredicted RBP9.28□□□□□ -0.92
UBE3B-208ENST00000538070 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.28□□□□□ -0.92
UBE3B-208ENST00000538070 QSER1Q2KHR3 1735 aa9.28□□□□□ -0.92
UBE3B-208ENST00000538070 KIAA0391O15091 583 aaKnown RBP9.27□□□□□ -0.92
UBE3B-208ENST00000538070 USP2O75604 605 aaPredicted RBP9.27□□□□□ -0.92
UBE3B-208ENST00000538070 CHRNA3P32297 505 aa9.27□□□□□ -0.92
UBE3B-208ENST00000538070 MYBPC2Q14324 1141 aa9.27□□□□□ -0.92
UBE3B-208ENST00000538070 GDAP1Q8TB36 358 aa9.27□□□□□ -0.92
UBE3B-208ENST00000538070 MFSD14AQ96MC6 490 aa9.27□□□□□ -0.92
UBE3B-208ENST00000538070 NENFQ9UMX5 172 aa9.27□□□□□ -0.92
UBE3B-208ENST00000538070 PCDHB2Q9Y5E7 798 aa9.27□□□□□ -0.92
UBE3B-208ENST00000538070 CAPN7Q9Y6W3 813 aa9.27□□□□□ -0.92
UBE3B-208ENST00000538070 LRRD1A4D1F6 860 aa9.27□□□□□ -0.93
UBE3B-208ENST00000538070 ZSCAN5DPP0CG00 497 aa9.27□□□□□ -0.93
UBE3B-208ENST00000538070 CYP2C8P10632 490 aa9.27□□□□□ -0.93
UBE3B-208ENST00000538070 TAS2R40P59535 323 aa9.27□□□□□ -0.93
UBE3B-208ENST00000538070 MAP3K10Q02779 954 aa9.27□□□□□ -0.93
UBE3B-208ENST00000538070 ZKSCAN8Q15776 578 aaPredicted RBP9.27□□□□□ -0.93
UBE3B-208ENST00000538070 ZNF568Q3ZCX4 644 aa9.27□□□□□ -0.93
UBE3B-208ENST00000538070 MSL3Q8N5Y2 521 aaKnown RBP9.27□□□□□ -0.93
UBE3B-208ENST00000538070 ARFGAP2Q8N6H7 521 aa9.27□□□□□ -0.93
UBE3B-208ENST00000538070 SPATC1LQ9H0A9 340 aa9.27□□□□□ -0.93
UBE3B-208ENST00000538070 CTNNAL1Q9UBT7 734 aa9.27□□□□□ -0.93
UBE3B-208ENST00000538070 GRIN2DO15399 1336 aa9.27□□□□□ -0.93
UBE3B-208ENST00000538070 ARIH2O95376 493 aa9.27□□□□□ -0.93
UBE3B-208ENST00000538070 MAP3K6O95382 1288 aa9.27□□□□□ -0.93
UBE3B-208ENST00000538070 VNN1O95497 513 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms