RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 PIH1D3Q9NQM4 214 aaKnown RBP11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 DIS3Q9Y2L1 958 aaKnown RBP11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 KCPQ6ZWJ8 1503 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 USP54Q70EL1 1684 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 MAGEB3O15480 346 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 ENTPD3O75355 529 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 HAUS5O94927 633 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 PDGFRBP09619 1106 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 GSTT2P0CG29 244 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 GSTT2BP0CG30 244 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 CDK4P11802 303 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 CACNB3P54284 484 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 FKBP1AP62942 108 aaKnown RBP11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 SLC18A3Q16572 532 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 TAF1BQ53T94 588 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 FBXO33Q7Z6M2 555 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 FAM151AQ8WW52 585 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 STK33Q9BYT3 514 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 TLE6Q9H808 572 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 TBC1D23Q9NUY8 699 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 DMTF1Q9Y222 760 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 MYPNQ86TC9 1320 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 PRDX5P30044 214 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 NEK3P51956 506 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 ABCB5Q2M3G0 1257 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 ACSBG2Q5FVE4 666 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 KLHL35Q6PF15 583 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 MIER3Q7Z3K6 550 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 VPS36Q86VN1 386 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 SYN2Q92777 582 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 SLC7A6OSQ96CW6 309 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 ZFRQ96KR1 1074 aaKnown RBP11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 ARPP21Q9UBL0 812 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 ARMCX3Q9UH62 379 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 SERPINB13Q9UIV8 391 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 RABL2BQ9UNT1 228 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 CHKBQ9Y259 395 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 GPC6Q9Y625 555 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 UTYO14607 1347 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 MGEA5O60502 916 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 UBA7P41226 1012 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 MAP3K10Q02779 954 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 CALCOCO2Q13137 446 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 RAPGEF1Q13905 1077 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 NTRK3Q16288 839 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 RFWD3Q6PCD5 774 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 HEATR3Q7Z4Q2 680 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 ALDH16A1Q8IZ83 802 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 METTL13Q8N6R0 699 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 GAB3Q8WWW8 586 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 PUS7LQ9H0K6 701 aaKnown RBP11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 AMFRQ9UKV5 643 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 ZHX2Q9Y6X8 837 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 MYH13Q9UKX3 1938 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 BHMG1C9JSJ3 638 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 EIF3FO00303 357 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 ZBED4O75132 1171 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 FGFR4P22455 802 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 VPS41P49754 854 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 GTF2A2P52657 109 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 PMS1P54277 932 aaKnown RBP11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 MGAT5Q09328 741 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 TRMT10CQ7L0Y3 403 aaKnown RBP11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 CGREF1Q99674 301 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 LBHD1Q9BQE6 289 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 PHTF1Q9UMS5 762 aa11.51□□□□□ -0.57
CLSTN3-207ENST00000537408 PKD1L3Q7Z443 1732 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 CCL15-CCL14A0A0B4J2E2 113 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 EXOC3O60645 756 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 CLPTM1O96005 669 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 FGGP02679 453 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 TXKP42681 527 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 TRPC1P48995 793 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 MECOMQ03112 1051 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 CCL15Q16663 113 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 SLC45A4Q5BKX6 768 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 HSPBAP1Q96EW2 488 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 LRRC4CQ9HCJ2 640 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 CEP72Q9P209 647 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 KANSL1LA0AUZ9 987 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 SPDYE2BA6NHP3 402 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 ADM5C9JUS6 153 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 RIPK2O43353 540 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 SPDYE6P0CI01 402 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 CETN2P41208 172 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 CHN2P52757 468 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 PDE4DQ08499 809 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 DACT2Q5SW24 774 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 PRAMEF18Q5VWM3 479 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 C3orf62Q6ZUJ4 267 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 CYB5R4Q7L1T6 521 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 KRT82Q9NSB4 513 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 HERC5Q9UII4 1024 aaKnown RBP11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 FAM32AQ9Y421 112 aaKnown RBP11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 LAMA4Q16363 1823 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 E9PBE3 544 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 PODXLO00592 558 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 EIF2S1P05198 315 aaKnown RBP11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 ITGA4P13612 1032 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms