RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 ATF2P15336 505 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 KRT15P19012 456 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 VCAM1P19320 739 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 CIITAP33076 1130 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 MAGEA10P43363 369 aaPredicted RBP6.19□□□□□ -1.42
CHD4-206ENST00000536999 GYG1P46976 350 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 TNNI2P48788 182 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 CDK8P49336 464 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 CLK2P49760 499 aaKnown RBP6.19□□□□□ -1.42
CHD4-206ENST00000536999 DNA2P51530 1060 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 ALDH5A1P51649 535 aaPredicted RBP6.19□□□□□ -1.42
CHD4-206ENST00000536999 SLC12A3P55017 1021 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 RAB15P59190 212 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 NCALDP61601 193 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 DYNLL1P63167 89 aaKnown RBP6.19□□□□□ -1.42
CHD4-206ENST00000536999 DEUP1Q05D60 604 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 CUL3Q13618 768 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 PTK6Q13882 451 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 KRT72Q14CN4 511 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 CCNG2Q16589 344 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 DBN1Q16643 649 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 QPCTQ16769 361 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 DOK7Q18PE1 504 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 DNAL1Q4LDG9 190 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 FAM133BQ5BKY9 247 aaKnown RBP6.19□□□□□ -1.42
CHD4-206ENST00000536999 DCAF17Q5H9S7 520 aaPredicted RBP6.19□□□□□ -1.42
CHD4-206ENST00000536999 LIN9Q5TKA1 542 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 DRICH1Q6PGQ1 229 aaPredicted RBP6.19□□□□□ -1.42
CHD4-206ENST00000536999 C3orf67Q6ZVT6 689 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 ANKS1BQ7Z6G8 1248 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 ALYREFQ86V81 257 aaKnown RBP6.19□□□□□ -1.42
CHD4-206ENST00000536999 EXOC3L1Q86VI1 746 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 FAM228AQ86W67 206 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 NELFCDQ8IXH7 590 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 NME8Q8N427 588 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 SAMD3Q8N6K7 520 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.19□□□□□ -1.42
CHD4-206ENST00000536999 FBXO25Q8TCJ0 367 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 DNAJC9Q8WXX5 260 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 SLC35C1Q96A29 364 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 WNK4Q96J92 1243 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 CDX2Q99626 313 aaPredicted RBP6.19□□□□□ -1.42
CHD4-206ENST00000536999 OSBPL1AQ9BXW6 950 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 VPS11Q9H270 941 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 DPH5Q9H2P9 285 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 AZI2Q9H6S1 392 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 SYNCQ9H7C4 482 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 ZFYVE28Q9HCC9 887 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 KCNMB3Q9NPA1 279 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 MYOZ2Q9NPC6 264 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 DMAP1Q9NPF5 467 aaPredicted RBP6.19□□□□□ -1.42
CHD4-206ENST00000536999 KCNQ5Q9NR82 932 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 RGL1Q9NZL6 768 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 ANAPC5Q9UJX4 755 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 DNAJC12Q9UKB3 198 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 GTF3C4Q9UKN8 822 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 ITGB1BP2Q9UKP3 347 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 ARIH1Q9Y4X5 557 aaPredicted RBP6.19□□□□□ -1.42
CHD4-206ENST00000536999 ECM29Q5VYK3 1845 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 MUC6Q6W4X9 2439 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 ANKRD36CQ5JPF3 1778 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 EYSQ5T1H1 3165 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 LAMA2P24043 3122 aaKnown RBP6.18□□□□□ -1.42
CHD4-206ENST00000536999 ZSCAN5CA6NGD5 496 aaPredicted RBP6.18□□□□□ -1.42
CHD4-206ENST00000536999 C6orf229H3BNL8 230 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 MPHOSPH10O00566 681 aaKnown RBP6.18□□□□□ -1.42
CHD4-206ENST00000536999 C2CD2LO14523 706 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 PSTPIP1O43586 416 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 DKC1O60832 514 aaKnown RBP eCLIP6.18□□□□□ -1.42
CHD4-206ENST00000536999 ATP2C2O75185 946 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 CIB2O75838 187 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 RTN3O95197 1032 aaPredicted RBP6.18□□□□□ -1.42
CHD4-206ENST00000536999 GCNT3O95395 438 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 GNRH1P01148 92 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 IL1BP01584 269 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 FTLP02792 175 aaPredicted RBP6.18□□□□□ -1.42
CHD4-206ENST00000536999 CYP3A4P08684 503 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 VIL1P09327 827 aaKnown RBP6.18□□□□□ -1.42
CHD4-206ENST00000536999 SYN1P17600 705 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 ATP4AP20648 1035 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 ATP2B4P23634 1241 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 PAX7P23759 505 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 ADCY8P40145 1251 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 PTGIRP43119 386 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 SERPINB4P48594 390 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 FMO5P49326 533 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 PEX5P50542 639 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 PRMT2P55345 433 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 ZNF280AP59817 542 aaPredicted RBP6.18□□□□□ -1.42
CHD4-206ENST00000536999 MCCD1P59942 119 aaPredicted RBP6.18□□□□□ -1.42
CHD4-206ENST00000536999 RNASE9P60153 205 aaKnown RBP6.18□□□□□ -1.42
CHD4-206ENST00000536999 UBXN2AP68543 259 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 MYL7Q01449 175 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 CDR2Q01850 454 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 TAP1Q03518 808 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 ZNF543Q08ER8 600 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 GIT2Q14161 759 aa6.18□□□□□ -1.42
CHD4-206ENST00000536999 DRAP1Q14919 205 aaPredicted RBP6.18□□□□□ -1.42
CHD4-206ENST00000536999 TAF1CQ15572 869 aaPredicted RBP6.18□□□□□ -1.42
CHD4-206ENST00000536999 ADRM1Q16186 407 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms