RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 RIN2Q8WYP3 895 aaPredicted RBP3.54□□□□□ -1.84
SKA3-207ENST00000536239 TFAP2BQ92481 460 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 MARS2Q96GW9 593 aaKnown RBP3.54□□□□□ -1.84
SKA3-207ENST00000536239 GPR101Q96P66 508 aaPredicted RBP3.54□□□□□ -1.84
SKA3-207ENST00000536239 PCGF6Q9BYE7 350 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 SPTLC3Q9NUV7 552 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 FBXO34Q9NWN3 711 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 HSFX1Q9UBD0 423 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 ADAM21Q9UKJ8 722 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 LINC01548A6NM66 108 aa3.53□□□□□ -1.84
SKA3-207ENST00000536239 PROM1O43490 865 aa3.53□□□□□ -1.84
SKA3-207ENST00000536239 KDM1AO60341 852 aa3.53□□□□□ -1.84
SKA3-207ENST00000536239 IL2RBP14784 551 aa3.53□□□□□ -1.84
SKA3-207ENST00000536239 POU3F2P20265 443 aaPredicted RBP3.53□□□□□ -1.84
SKA3-207ENST00000536239 CCT4P50991 539 aaKnown RBP3.53□□□□□ -1.84
SKA3-207ENST00000536239 OCRLQ01968 901 aa3.53□□□□□ -1.84
SKA3-207ENST00000536239 TFF2Q03403 129 aa3.53□□□□□ -1.84
SKA3-207ENST00000536239 CT83Q5H943 113 aa3.53□□□□□ -1.84
SKA3-207ENST00000536239 OTUD7BQ6GQQ9 843 aa3.53□□□□□ -1.84
SKA3-207ENST00000536239 GPR156Q8NFN8 814 aa3.53□□□□□ -1.84
SKA3-207ENST00000536239 FBXL20Q96IG2 436 aa3.53□□□□□ -1.84
SKA3-207ENST00000536239 MED15Q96RN5 788 aa3.53□□□□□ -1.84
SKA3-207ENST00000536239 PNKPQ96T60 521 aa3.53□□□□□ -1.84
SKA3-207ENST00000536239 BHMT2Q9H2M3 363 aa3.53□□□□□ -1.84
SKA3-207ENST00000536239 IGSF5Q9NSI5 407 aa3.53□□□□□ -1.84
SKA3-207ENST00000536239 MOCS1Q9NZB8 636 aa3.53□□□□□ -1.84
SKA3-207ENST00000536239 ZNF580Q9UK33 172 aa3.53□□□□□ -1.84
SKA3-207ENST00000536239 FAM83GA6ND36 823 aa3.52□□□□□ -1.85
SKA3-207ENST00000536239 RAB11FIP3O75154 756 aa3.52□□□□□ -1.85
SKA3-207ENST00000536239 PTPRRQ15256 657 aa3.52□□□□□ -1.85
SKA3-207ENST00000536239 SOGA3Q5TF21 947 aa3.52□□□□□ -1.85
SKA3-207ENST00000536239 ZNF529Q6P280 563 aa3.52□□□□□ -1.85
SKA3-207ENST00000536239 ZNF782Q6ZMW2 699 aaPredicted RBP3.52□□□□□ -1.85
SKA3-207ENST00000536239 NUP133Q8WUM0 1156 aa3.52□□□□□ -1.85
SKA3-207ENST00000536239 STON2Q8WXE9 905 aa3.52□□□□□ -1.85
SKA3-207ENST00000536239 SEMA4CQ9C0C4 833 aa3.52□□□□□ -1.85
SKA3-207ENST00000536239 SLC23A1Q9UHI7 598 aa3.52□□□□□ -1.85
SKA3-207ENST00000536239 CLSPNQ9HAW4 1339 aa3.51□□□□□ -1.85
SKA3-207ENST00000536239 GSG1L2A8MUP6 293 aa3.51□□□□□ -1.85
SKA3-207ENST00000536239 LATS1O95835 1130 aa3.51□□□□□ -1.85
SKA3-207ENST00000536239 TKTP29401 623 aaKnown RBP3.51□□□□□ -1.85
SKA3-207ENST00000536239 ECHS1P30084 290 aa3.51□□□□□ -1.85
SKA3-207ENST00000536239 GUCY1A2P33402 732 aa3.51□□□□□ -1.85
SKA3-207ENST00000536239 NOMO3P69849 1222 aa3.51□□□□□ -1.85
SKA3-207ENST00000536239 SART3Q15020 963 aaKnown RBP3.51□□□□□ -1.85
SKA3-207ENST00000536239 NOMO1Q15155 1222 aa3.51□□□□□ -1.85
SKA3-207ENST00000536239 NOMO2Q5JPE7 1267 aa3.51□□□□□ -1.85
SKA3-207ENST00000536239 BROXQ5VW32 411 aa3.51□□□□□ -1.85
SKA3-207ENST00000536239 MORN5Q5VZ52 161 aa3.51□□□□□ -1.85
SKA3-207ENST00000536239 SLC9A4Q6AI14 798 aa3.51□□□□□ -1.85
SKA3-207ENST00000536239 TECPR1Q7Z6L1 1165 aa3.51□□□□□ -1.85
SKA3-207ENST00000536239 PQLC1Q8N2U9 271 aa3.51□□□□□ -1.85
SKA3-207ENST00000536239 EAF2Q96CJ1 260 aaPredicted RBP3.51□□□□□ -1.85
SKA3-207ENST00000536239 HAPLN3Q96S86 360 aa3.51□□□□□ -1.85
SKA3-207ENST00000536239 UHRF1Q96T88 793 aaPredicted RBP3.51□□□□□ -1.85
SKA3-207ENST00000536239 NRIP3Q9NQ35 241 aa3.51□□□□□ -1.85
SKA3-207ENST00000536239 EDARQ9UNE0 448 aa3.51□□□□□ -1.85
SKA3-207ENST00000536239 TBC1D30Q9Y2I9 924 aa3.51□□□□□ -1.85
SKA3-207ENST00000536239 LINC00473A8K010 186 aa3.5□□□□□ -1.85
SKA3-207ENST00000536239 ADM5C9JUS6 153 aa3.5□□□□□ -1.85
SKA3-207ENST00000536239 ASMTLO95671 621 aa3.5□□□□□ -1.85
SKA3-207ENST00000536239 ALDH1A3P47895 512 aa3.5□□□□□ -1.85
SKA3-207ENST00000536239 LSSP48449 732 aa3.5□□□□□ -1.85
SKA3-207ENST00000536239 PER3P56645 1201 aa3.5□□□□□ -1.85
SKA3-207ENST00000536239 AWAT2Q6E213 333 aa3.5□□□□□ -1.85
SKA3-207ENST00000536239 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.5□□□□□ -1.85
SKA3-207ENST00000536239 TSHZ1Q6ZSZ6 1077 aa3.5□□□□□ -1.85
SKA3-207ENST00000536239 SEM1Q6ZVN7 128 aa3.5□□□□□ -1.85
SKA3-207ENST00000536239 UBE3BQ7Z3V4 1068 aa3.5□□□□□ -1.85
SKA3-207ENST00000536239 NEK8Q86SG6 692 aa3.5□□□□□ -1.85
SKA3-207ENST00000536239 RASSF3Q86WH2 238 aa3.5□□□□□ -1.85
SKA3-207ENST00000536239 FITM2Q8N6M3 262 aa3.5□□□□□ -1.85
SKA3-207ENST00000536239 SLC30A5Q8TAD4 765 aa3.5□□□□□ -1.85
SKA3-207ENST00000536239 DENND1AQ8TEH3 1009 aa3.5□□□□□ -1.85
SKA3-207ENST00000536239 PGBD1Q96JS3 809 aa3.5□□□□□ -1.85
SKA3-207ENST00000536239 MYOCQ99972 504 aa3.5□□□□□ -1.85
SKA3-207ENST00000536239 INTS13Q9NVM9 706 aa3.5□□□□□ -1.85
SKA3-207ENST00000536239 ST3GAL5Q9UNP4 418 aa3.5□□□□□ -1.85
SKA3-207ENST00000536239 NOC2LQ9Y3T9 749 aaKnown RBP3.5□□□□□ -1.85
SKA3-207ENST00000536239 CCDC180Q9P1Z9 1646 aa3.5□□□□□ -1.85
SKA3-207ENST00000536239 A0A1W2PS29 197 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 H3BNC9 293 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 GATA3P23771 443 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 CDK17Q00537 523 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 SLFN5Q08AF3 891 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 PCBP1Q15365 356 aaKnown RBP eCLIP3.49□□□□□ -1.85
SKA3-207ENST00000536239 UGT8Q16880 541 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 TXNRD1Q16881 649 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 FAM153CQ494X1 144 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 TMEM119Q4V9L6 283 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 SLC44A4Q53GD3 710 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 GJC2Q5T442 439 aaPredicted RBP3.49□□□□□ -1.85
SKA3-207ENST00000536239 SUMO4Q6EEV6 95 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 FAM180AQ6UWF9 173 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 C11orf74Q86VG3 221 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 LRRTM3Q86VH5 581 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 RASAL3Q86YV0 1011 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 TOR1AIP2Q8NFQ8 470 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 LPIN2Q92539 896 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 PKNOX2Q96KN3 472 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms