RNA–Protein interactions for RNA: ENST00000535993.1

CCND1-202, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-202ENST00000535993 SLC8B1Q6J4K2 584 aa13.32□□□□□ -0.28
CCND1-202ENST00000535993 PHLDB3Q6NSJ2 640 aa13.32□□□□□ -0.28
CCND1-202ENST00000535993 RSPO2Q6UXX9 243 aaPredicted RBP13.32□□□□□ -0.28
CCND1-202ENST00000535993 SYT2Q8N9I0 419 aaPredicted RBP13.32□□□□□ -0.28
CCND1-202ENST00000535993 C3orf58Q8NDZ4 430 aa13.32□□□□□ -0.28
CCND1-202ENST00000535993 TMEM161BQ8NDZ6 487 aa13.32□□□□□ -0.28
CCND1-202ENST00000535993 ZNF461Q8TAF7 563 aa13.32□□□□□ -0.28
CCND1-202ENST00000535993 FGF13Q92913 245 aa13.32□□□□□ -0.28
CCND1-202ENST00000535993 NKD2Q969F2 451 aaPredicted RBP13.32□□□□□ -0.28
CCND1-202ENST00000535993 SHDQ96IW2 340 aa13.32□□□□□ -0.28
CCND1-202ENST00000535993 ZMAT2Q96NC0 199 aaKnown RBP13.32□□□□□ -0.28
CCND1-202ENST00000535993 PNMA5Q96PV4 448 aa13.32□□□□□ -0.28
CCND1-202ENST00000535993 ANKFY1Q9P2R3 1169 aa13.32□□□□□ -0.28
CCND1-202ENST00000535993 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.32□□□□□ -0.28
CCND1-202ENST00000535993 USP34Q70CQ2 3546 aa13.31□□□□□ -0.28
CCND1-202ENST00000535993 ABLIM1O14639 778 aa13.31□□□□□ -0.28
CCND1-202ENST00000535993 CLDN3O15551 220 aa13.31□□□□□ -0.28
CCND1-202ENST00000535993 MAPTP10636 758 aaKnown RBP13.31□□□□□ -0.28
CCND1-202ENST00000535993 SYT1P21579 422 aa13.31□□□□□ -0.28
CCND1-202ENST00000535993 MATR3P43243 847 aaKnown RBP eCLIP13.31□□□□□ -0.28
CCND1-202ENST00000535993 SLC12A3P55017 1021 aa13.31□□□□□ -0.28
CCND1-202ENST00000535993 VARS2Q5ST30 1063 aaKnown RBP13.31□□□□□ -0.28
CCND1-202ENST00000535993 PARM1Q6UWI2 310 aa13.31□□□□□ -0.28
CCND1-202ENST00000535993 ZPBP2Q6X784 338 aa13.31□□□□□ -0.28
CCND1-202ENST00000535993 BRAPQ7Z569 592 aa13.31□□□□□ -0.28
CCND1-202ENST00000535993 FRMD5Q7Z6J6 570 aa13.31□□□□□ -0.28
CCND1-202ENST00000535993 HSCBQ8IWL3 235 aa13.31□□□□□ -0.28
CCND1-202ENST00000535993 APPL2Q8NEU8 664 aa13.31□□□□□ -0.28
CCND1-202ENST00000535993 ITFG1Q8TB96 612 aa13.31□□□□□ -0.28
CCND1-202ENST00000535993 FGF14Q92915 247 aa13.31□□□□□ -0.28
CCND1-202ENST00000535993 AK8Q96MA6 479 aa13.31□□□□□ -0.28
CCND1-202ENST00000535993 PLIN2Q99541 437 aa13.31□□□□□ -0.28
CCND1-202ENST00000535993 LARSQ9P2J5 1176 aaKnown RBP13.31□□□□□ -0.28
CCND1-202ENST00000535993 DNMT3BQ9UBC3 853 aaKnown RBP13.31□□□□□ -0.28
CCND1-202ENST00000535993 MRPS23Q9Y3D9 190 aaKnown RBP13.31□□□□□ -0.28
CCND1-202ENST00000535993 SIT1Q9Y3P8 196 aa13.31□□□□□ -0.28
CCND1-202ENST00000535993 MYH11P35749 1972 aa13.31□□□□□ -0.28
CCND1-202ENST00000535993 TRIP11Q15643 1979 aa13.31□□□□□ -0.28
CCND1-202ENST00000535993 ARHGEF37A1IGU5 675 aa13.3□□□□□ -0.28
CCND1-202ENST00000535993 PRR23AA6NEV1 266 aa13.3□□□□□ -0.28
CCND1-202ENST00000535993 PRRG1O14668 218 aa13.3□□□□□ -0.28
CCND1-202ENST00000535993 ABLIM3O94929 683 aa13.3□□□□□ -0.28
CCND1-202ENST00000535993 BMP15O95972 392 aa13.3□□□□□ -0.28
CCND1-202ENST00000535993 LRG1P02750 347 aa13.3□□□□□ -0.28
CCND1-202ENST00000535993 SCP2P22307 547 aa13.3□□□□□ -0.28
CCND1-202ENST00000535993 MCM4P33991 863 aa13.3□□□□□ -0.28
CCND1-202ENST00000535993 GPC5P78333 572 aa13.3□□□□□ -0.28
CCND1-202ENST00000535993 PFKPQ01813 784 aa13.3□□□□□ -0.28
CCND1-202ENST00000535993 ROR1Q01973 937 aa13.3□□□□□ -0.28
CCND1-202ENST00000535993 MCL1Q07820 350 aa13.3□□□□□ -0.28
CCND1-202ENST00000535993 KYAT1Q16773 422 aa13.3□□□□□ -0.28
CCND1-202ENST00000535993 TMEM119Q4V9L6 283 aa13.3□□□□□ -0.28
CCND1-202ENST00000535993 ST13P5Q8NFI4 369 aaPredicted RBP13.3□□□□□ -0.28
CCND1-202ENST00000535993 C18orf25Q96B23 403 aaPredicted RBP13.3□□□□□ -0.28
CCND1-202ENST00000535993 BICD1Q96G01 975 aa13.3□□□□□ -0.28
CCND1-202ENST00000535993 CALML4Q96GE6 196 aa13.3□□□□□ -0.28
CCND1-202ENST00000535993 ZBTB45Q96K62 511 aaPredicted RBP13.3□□□□□ -0.28
CCND1-202ENST00000535993 RPP25Q9BUL9 199 aaKnown RBP13.3□□□□□ -0.28
CCND1-202ENST00000535993 PLEKHA5Q9HAU0 1116 aa13.3□□□□□ -0.28
CCND1-202ENST00000535993 AVENQ9NQS1 362 aaPredicted RBP13.3□□□□□ -0.28
CCND1-202ENST00000535993 HCFC1R1Q9NWW0 138 aa13.3□□□□□ -0.28
CCND1-202ENST00000535993 GDE1Q9NZC3 331 aa13.3□□□□□ -0.28
CCND1-202ENST00000535993 DOCK6Q96HP0 2047 aa13.3□□□□□ -0.28
CCND1-202ENST00000535993 VWA8A3KMH1 1905 aa13.29□□□□□ -0.28
CCND1-202ENST00000535993 RHOP08100 348 aa13.29□□□□□ -0.28
CCND1-202ENST00000535993 CLTAP09496 248 aa13.29□□□□□ -0.28
CCND1-202ENST00000535993 ATF2P15336 505 aa13.29□□□□□ -0.28
CCND1-202ENST00000535993 PTPN2P17706 415 aa13.29□□□□□ -0.28
CCND1-202ENST00000535993 MARCKSP29966 332 aaPredicted RBP13.29□□□□□ -0.28
CCND1-202ENST00000535993 UBA7P41226 1012 aa13.29□□□□□ -0.28
CCND1-202ENST00000535993 ARPP19P56211 112 aa13.29□□□□□ -0.28
CCND1-202ENST00000535993 MRPL58Q14197 206 aaKnown RBP13.29□□□□□ -0.28
CCND1-202ENST00000535993 SLC10A6Q3KNW5 377 aa13.29□□□□□ -0.28
CCND1-202ENST00000535993 CTXN3Q4LDR2 81 aa13.29□□□□□ -0.28
CCND1-202ENST00000535993 TPGS2Q68CL5 300 aa13.29□□□□□ -0.28
CCND1-202ENST00000535993 ZNF280DQ6N043 979 aa13.29□□□□□ -0.28
CCND1-202ENST00000535993 ASCL5Q7RTU5 278 aa13.29□□□□□ -0.28
CCND1-202ENST00000535993 NPAS3Q8IXF0 933 aa13.29□□□□□ -0.28
CCND1-202ENST00000535993 TCEAL8Q8IYN2 117 aa13.29□□□□□ -0.28
CCND1-202ENST00000535993 KCNN1Q92952 543 aa13.29□□□□□ -0.28
CCND1-202ENST00000535993 SUSD3Q96L08 255 aa13.29□□□□□ -0.28
CCND1-202ENST00000535993 CYP4F11Q9HBI6 524 aa13.29□□□□□ -0.28
CCND1-202ENST00000535993 ODF2LQ9ULJ1 636 aa13.29□□□□□ -0.28
CCND1-202ENST00000535993 MAFFQ9ULX9 164 aa13.29□□□□□ -0.28
CCND1-202ENST00000535993 MTMR6Q9Y217 621 aa13.29□□□□□ -0.28
CCND1-202ENST00000535993 MYO15AQ9UKN7 3530 aa13.28□□□□□ -0.28
CCND1-202ENST00000535993 NPHP3-ACAD11A0A0J9YXS1 232 aa13.28□□□□□ -0.28
CCND1-202ENST00000535993 WDR27A2RRH5 827 aa13.28□□□□□ -0.28
CCND1-202ENST00000535993 ZNF197O14709 1029 aa13.28□□□□□ -0.28
CCND1-202ENST00000535993 TBC1D4O60343 1298 aa13.28□□□□□ -0.28
CCND1-202ENST00000535993 CXCL8P10145 99 aa13.28□□□□□ -0.28
CCND1-202ENST00000535993 NCKAP1LP55160 1127 aa13.28□□□□□ -0.28
CCND1-202ENST00000535993 STARD6P59095 220 aa13.28□□□□□ -0.28
CCND1-202ENST00000535993 CACNB1Q02641 598 aaPredicted RBP13.28□□□□□ -0.28
CCND1-202ENST00000535993 PRKCQQ04759 706 aa13.28□□□□□ -0.28
CCND1-202ENST00000535993 RESTQ13127 1097 aa13.28□□□□□ -0.28
CCND1-202ENST00000535993 SEZ6Q53EL9 994 aa13.28□□□□□ -0.28
CCND1-202ENST00000535993 ARSHQ5FYA8 562 aa13.28□□□□□ -0.28
CCND1-202ENST00000535993 SPECC1Q5M775 1068 aa13.28□□□□□ -0.28
CCND1-202ENST00000535993 HAUS6Q7Z4H7 955 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms