RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 HHIPQ96QV1 700 aa11.92□□□□□ -0.5
VAMP1-204ENST00000535180 CSRNP2Q9H175 543 aa11.92□□□□□ -0.5
VAMP1-204ENST00000535180 GLT8D2Q9H1C3 349 aa11.92□□□□□ -0.5
VAMP1-204ENST00000535180 NXF3Q9H4D5 531 aaKnown RBP11.92□□□□□ -0.5
VAMP1-204ENST00000535180 DKK4Q9UBT3 224 aa11.92□□□□□ -0.5
VAMP1-204ENST00000535180 BACE2Q9Y5Z0 518 aa11.92□□□□□ -0.5
VAMP1-204ENST00000535180 U3KPZ7 1027 aaPredicted RBP11.92□□□□□ -0.5
VAMP1-204ENST00000535180 PTPN13Q12923 2485 aa11.92□□□□□ -0.5
VAMP1-204ENST00000535180 CASTOR2A6NHX0 329 aa11.91□□□□□ -0.5
VAMP1-204ENST00000535180 PRRG1O14668 218 aa11.91□□□□□ -0.5
VAMP1-204ENST00000535180 ARHGAP6O43182 974 aa11.91□□□□□ -0.5
VAMP1-204ENST00000535180 TSPAN1O60635 241 aa11.91□□□□□ -0.5
VAMP1-204ENST00000535180 ABLIM3O94929 683 aa11.91□□□□□ -0.5
VAMP1-204ENST00000535180 CYP21A2P08686 494 aa11.91□□□□□ -0.5
VAMP1-204ENST00000535180 CALM1P0DP23 149 aa11.91□□□□□ -0.5
VAMP1-204ENST00000535180 CALM2P0DP24 149 aa11.91□□□□□ -0.5
VAMP1-204ENST00000535180 CALM3P0DP25 149 aa11.91□□□□□ -0.5
VAMP1-204ENST00000535180 RXRAP19793 462 aa11.91□□□□□ -0.5
VAMP1-204ENST00000535180 ELF1P32519 619 aa11.91□□□□□ -0.5
VAMP1-204ENST00000535180 MAPK8P45983 427 aa11.91□□□□□ -0.5
VAMP1-204ENST00000535180 HNRNPDQ14103 355 aaKnown RBP11.91□□□□□ -0.5
VAMP1-204ENST00000535180 ARHGAP29Q52LW3 1261 aa11.91□□□□□ -0.5
VAMP1-204ENST00000535180 TRIM61Q5EBN2 209 aa11.91□□□□□ -0.5
VAMP1-204ENST00000535180 TCEAL8Q8IYN2 117 aa11.91□□□□□ -0.5
VAMP1-204ENST00000535180 ZNF843Q8N446 348 aa11.91□□□□□ -0.5
VAMP1-204ENST00000535180 ADAMTS14Q8WXS8 1223 aa11.91□□□□□ -0.5
VAMP1-204ENST00000535180 TMEM209Q96SK2 561 aa11.91□□□□□ -0.5
VAMP1-204ENST00000535180 NUSAP1Q9BXS6 441 aaKnown RBP11.91□□□□□ -0.5
VAMP1-204ENST00000535180 TRIM6Q9C030 488 aaPredicted RBP11.91□□□□□ -0.5
VAMP1-204ENST00000535180 POLR3BQ9NW08 1133 aaPredicted RBP11.91□□□□□ -0.5
VAMP1-204ENST00000535180 SNTG2Q9NY99 539 aa11.91□□□□□ -0.5
VAMP1-204ENST00000535180 KLK14Q9P0G3 267 aa11.91□□□□□ -0.5
VAMP1-204ENST00000535180 PLXND1Q9Y4D7 1925 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 A0A087WV48 116 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 E7EWF7 191 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 HIP1O00291 1037 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 CHMP2AO43633 222 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 ATF2P15336 505 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 GJA1P17302 382 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 EPHA5P54756 1037 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 NCBP1Q09161 790 aaKnown RBP11.9□□□□□ -0.5
VAMP1-204ENST00000535180 LAMTOR4Q0VGL1 99 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 TEAD2Q15562 447 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 TMEM196Q5HYL7 178 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 JAKMIP3Q5VZ66 844 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 IQCEQ6IPM2 695 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 TMTC3Q6ZXV5 915 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 HAUS6Q7Z4H7 955 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 HS6ST3Q8IZP7 471 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 LEMD2Q8NC56 503 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 PIGKQ92643 395 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 LENG9Q96B70 501 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 CPB2Q96IY4 423 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 ZFYVE19Q96K21 471 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 RIT2Q99578 217 aa11.9□□□□□ -0.5
VAMP1-204ENST00000535180 PCDH15Q96QU1 1955 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 DDX11L8A8MPP1 907 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 hCG_1984214I3L0E3 225 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 APBB3O95704 486 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 MYL4P12829 197 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 ENGP17813 658 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 CIITAP33076 1130 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 ROR1Q01973 937 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 GRSF1Q12849 480 aaKnown RBP eCLIP11.89□□□□□ -0.51
VAMP1-204ENST00000535180 SLC8B1Q6J4K2 584 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 FSTL4Q6MZW2 842 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 ANKS3Q6ZW76 656 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 ANO5Q75V66 913 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 SCUBE3Q8IX30 993 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 MB21D2Q8IYB1 491 aaPredicted RBP11.89□□□□□ -0.51
VAMP1-204ENST00000535180 ELMOD1Q8N336 334 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 TMTC2Q8N394 836 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 ZNF713Q8N859 430 aaPredicted RBP11.89□□□□□ -0.51
VAMP1-204ENST00000535180 FANCBQ8NB91 859 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 RNF149Q8NC42 400 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 RDM1Q8NG50 284 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 PSPC1Q8WXF1 523 aaKnown RBP11.89□□□□□ -0.51
VAMP1-204ENST00000535180 ZNF512Q96ME7 567 aaPredicted RBP11.89□□□□□ -0.51
VAMP1-204ENST00000535180 MTA3Q9BTC8 594 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 UNC45AQ9H3U1 944 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 SLITRK6Q9H5Y7 841 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 CYP4F11Q9HBI6 524 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 PARP2Q9UGN5 583 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 INVSQ9Y283 1065 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 INSL5Q9Y5Q6 135 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 DENND4CQ5VZ89 1909 aa11.89□□□□□ -0.51
VAMP1-204ENST00000535180 PTPRQQ9UMZ3 2332 aa11.88□□□□□ -0.51
VAMP1-204ENST00000535180 CCDC69A6NI79 296 aa11.88□□□□□ -0.51
VAMP1-204ENST00000535180 TRDMT1O14717 391 aaKnown RBP11.88□□□□□ -0.51
VAMP1-204ENST00000535180 MSH4O15457 936 aa11.88□□□□□ -0.51
VAMP1-204ENST00000535180 ASAP2O43150 1006 aa11.88□□□□□ -0.51
VAMP1-204ENST00000535180 GAS7O60861 476 aa11.88□□□□□ -0.51
VAMP1-204ENST00000535180 RNF40O75150 1001 aa11.88□□□□□ -0.51
VAMP1-204ENST00000535180 SEC24AO95486 1093 aa11.88□□□□□ -0.51
VAMP1-204ENST00000535180 DHPSP49366 369 aaPredicted RBP11.88□□□□□ -0.51
VAMP1-204ENST00000535180 HNRNPUQ00839 825 aaKnown RBP eCLIP11.88□□□□□ -0.51
VAMP1-204ENST00000535180 TNK2Q07912 1038 aa11.88□□□□□ -0.51
VAMP1-204ENST00000535180 PTPAQ15257 358 aa11.88□□□□□ -0.51
VAMP1-204ENST00000535180 ITPRIPL2Q3MIP1 535 aa11.88□□□□□ -0.51
VAMP1-204ENST00000535180 USP39Q53GS9 565 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms