RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 GTF2H1P32780 548 aa13.28□□□□□ -0.28
SCARB1-204ENST00000535005 RGS19P49795 217 aa13.28□□□□□ -0.28
SCARB1-204ENST00000535005 WNT7BP56706 349 aa13.28□□□□□ -0.28
SCARB1-204ENST00000535005 SMC1AQ14683 1233 aaKnown RBP13.28□□□□□ -0.28
SCARB1-204ENST00000535005 NT5DC4Q86YG4 428 aa13.28□□□□□ -0.28
SCARB1-204ENST00000535005 GOLGA1Q92805 767 aa13.28□□□□□ -0.28
SCARB1-204ENST00000535005 PDE11AQ9HCR9 933 aa13.28□□□□□ -0.28
SCARB1-204ENST00000535005 CNTN3Q9P232 1028 aa13.28□□□□□ -0.28
SCARB1-204ENST00000535005 DERAQ9Y315 318 aa13.28□□□□□ -0.28
SCARB1-204ENST00000535005 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.28□□□□□ -0.28
SCARB1-204ENST00000535005 LTBP2Q14767 1821 aa13.28□□□□□ -0.28
SCARB1-204ENST00000535005 PMM2O15305 246 aa13.27□□□□□ -0.28
SCARB1-204ENST00000535005 FGBP02675 491 aa13.27□□□□□ -0.28
SCARB1-204ENST00000535005 ACRP10323 421 aa13.27□□□□□ -0.28
SCARB1-204ENST00000535005 KCNE1P15382 129 aa13.27□□□□□ -0.28
SCARB1-204ENST00000535005 SYN1P17600 705 aa13.27□□□□□ -0.28
SCARB1-204ENST00000535005 AKAP5P24588 427 aa13.27□□□□□ -0.28
SCARB1-204ENST00000535005 OAS2P29728 719 aaKnown RBP13.27□□□□□ -0.28
SCARB1-204ENST00000535005 COPB1P53618 953 aaKnown RBP13.27□□□□□ -0.28
SCARB1-204ENST00000535005 AP3M2P53677 418 aa13.27□□□□□ -0.28
SCARB1-204ENST00000535005 UBASH3AP57075 661 aa13.27□□□□□ -0.28
SCARB1-204ENST00000535005 MIIPQ5JXC2 388 aa13.27□□□□□ -0.28
SCARB1-204ENST00000535005 PSRC1Q6PGN9 363 aaPredicted RBP13.27□□□□□ -0.28
SCARB1-204ENST00000535005 RSPH1Q8WYR4 309 aa13.27□□□□□ -0.28
SCARB1-204ENST00000535005 CCDC127Q96BQ5 260 aa13.27□□□□□ -0.28
SCARB1-204ENST00000535005 FNBP1Q96RU3 617 aa13.27□□□□□ -0.28
SCARB1-204ENST00000535005 CGRRF1Q99675 332 aa13.27□□□□□ -0.28
SCARB1-204ENST00000535005 LBHD1Q9BQE6 289 aaPredicted RBP13.27□□□□□ -0.28
SCARB1-204ENST00000535005 RASSF4Q9H2L5 321 aa13.27□□□□□ -0.28
SCARB1-204ENST00000535005 PARP2Q9UGN5 583 aa13.27□□□□□ -0.28
SCARB1-204ENST00000535005 MRFAP1Q9Y605 127 aa13.27□□□□□ -0.28
SCARB1-204ENST00000535005 LRRIQ3A6PVS8 624 aaPredicted RBP13.27□□□□□ -0.29
SCARB1-204ENST00000535005 EPHB4P54760 987 aa13.27□□□□□ -0.29
SCARB1-204ENST00000535005 DLG4P78352 724 aa13.27□□□□□ -0.29
SCARB1-204ENST00000535005 ZBTB6Q15916 424 aa13.27□□□□□ -0.29
SCARB1-204ENST00000535005 VWA3BQ502W6 1294 aa13.27□□□□□ -0.29
SCARB1-204ENST00000535005 TMEM240Q5SV17 173 aa13.27□□□□□ -0.29
SCARB1-204ENST00000535005 NPAS4Q8IUM7 802 aa13.27□□□□□ -0.29
SCARB1-204ENST00000535005 WDR49Q8IV35 697 aa13.27□□□□□ -0.29
SCARB1-204ENST00000535005 APOL6Q9BWW8 343 aa13.27□□□□□ -0.29
SCARB1-204ENST00000535005 CARD6Q9BX69 1037 aa13.27□□□□□ -0.29
SCARB1-204ENST00000535005 NDST4Q9H3R1 872 aa13.27□□□□□ -0.29
SCARB1-204ENST00000535005 RSAD1Q9HA92 442 aa13.27□□□□□ -0.29
SCARB1-204ENST00000535005 TAB2Q9NYJ8 693 aa13.27□□□□□ -0.29
SCARB1-204ENST00000535005 PPP2R2CQ9Y2T4 447 aa13.27□□□□□ -0.29
SCARB1-204ENST00000535005 C2CD2Q9Y426 696 aa13.27□□□□□ -0.29
SCARB1-204ENST00000535005 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.27□□□□□ -0.29
SCARB1-204ENST00000535005 TTC3P53804 2025 aa13.26□□□□□ -0.29
SCARB1-204ENST00000535005 A0A1B0GTH6 734 aa13.26□□□□□ -0.29
SCARB1-204ENST00000535005 MEIS3P2A8K0S8 358 aa13.26□□□□□ -0.29
SCARB1-204ENST00000535005 AFPP02771 609 aaKnown RBP13.26□□□□□ -0.29
SCARB1-204ENST00000535005 PDE4CQ08493 712 aa13.26□□□□□ -0.29
SCARB1-204ENST00000535005 KCNH2Q12809 1159 aa13.26□□□□□ -0.29
SCARB1-204ENST00000535005 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.26□□□□□ -0.294e-11■■□□□ 14
SCARB1-204ENST00000535005 C15orf39Q6ZRI6 1047 aa13.26□□□□□ -0.29
SCARB1-204ENST00000535005 ZNF365Q70YC5 407 aa13.26□□□□□ -0.29
SCARB1-204ENST00000535005 LRRN4CLQ8ND94 238 aa13.26□□□□□ -0.29
SCARB1-204ENST00000535005 GSTCDQ8NEC7 633 aa13.26□□□□□ -0.29
SCARB1-204ENST00000535005 ZNF516Q92618 1163 aa13.26□□□□□ -0.29
SCARB1-204ENST00000535005 LPPQ93052 612 aa13.26□□□□□ -0.29
SCARB1-204ENST00000535005 RNF19AQ9NV58 838 aa13.26□□□□□ -0.29
SCARB1-204ENST00000535005 INTS13Q9NVM9 706 aa13.26□□□□□ -0.29
SCARB1-204ENST00000535005 PCDHB7Q9Y5E2 793 aa13.26□□□□□ -0.29
SCARB1-204ENST00000535005 MICAL3Q7RTP6 2002 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 SMIM28A0A1B0GU29 152 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 LGALS16A8MUM7 142 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 P4HA2O15460 535 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 HOXA2O43364 376 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 SERPINC1P01008 464 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 AMHP03971 560 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 TRIM49P0CI25 452 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 TRIM49CP0CI26 452 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 DLATP10515 647 aaKnown RBP13.25□□□□□ -0.29
SCARB1-204ENST00000535005 TNNI1P19237 187 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 WDR5P61964 334 aaKnown RBP13.25□□□□□ -0.29
SCARB1-204ENST00000535005 PPP3CAQ08209 521 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 TBX2Q13207 712 aaPredicted RBP13.25□□□□□ -0.29
SCARB1-204ENST00000535005 ZSCAN26Q16670 478 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 DUOXA2Q1HG44 320 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 FILIP1LQ4L180 1135 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 DCAF17Q5H9S7 520 aaPredicted RBP13.25□□□□□ -0.29
SCARB1-204ENST00000535005 TCERG1LQ5VWI1 586 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 EFCAB13Q8IY85 973 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 HERVK_113Q902F9 699 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 FAM212AQ96EL1 285 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 ZMAT2Q96NC0 199 aaKnown RBP13.25□□□□□ -0.29
SCARB1-204ENST00000535005 GAD1Q99259 594 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 POP1Q99575 1024 aaKnown RBP13.25□□□□□ -0.29
SCARB1-204ENST00000535005 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.25□□□□□ -0.293e-8■■■□□ 15.6
SCARB1-204ENST00000535005 VPS16Q9H269 839 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 CXCL16Q9H2A7 254 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 KLK14Q9P0G3 267 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 PTPRJQ12913 1337 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 ARL5CA6NH57 179 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 PTGESO14684 152 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 N4BP1O75113 896 aaKnown RBP13.25□□□□□ -0.29
SCARB1-204ENST00000535005 C4BPAP04003 597 aaKnown RBP13.25□□□□□ -0.29
SCARB1-204ENST00000535005 FMO5P49326 533 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 NR1I3Q14994 352 aa13.25□□□□□ -0.29
SCARB1-204ENST00000535005 TMEM132DQ14C87 1099 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms