RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 KCNT2Q6UVM3 1135 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 SPRED2Q7Z698 418 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 WDR49Q8IV35 697 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 COLGALT2Q8IYK4 626 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 COLGALT1Q8NBJ5 622 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 OR5B17Q8NGF7 314 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 PARD3BQ8TEW8 1205 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 HASPINQ8TF76 798 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 TMEM174Q8WUU8 243 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 ARNTL2Q8WYA1 636 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 TGS1Q96RS0 853 aaKnown RBP18.88■□□□□ 0.61
NXF1-216ENST00000533499 PAAF1Q9BRP4 392 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 THAP9Q9H5L6 903 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 INTS13Q9NVM9 706 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 FANCLQ9NW38 375 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 C2CD2Q9Y426 696 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 PTPRJQ12913 1337 aa18.88■□□□□ 0.61
NXF1-216ENST00000533499 SMTNL1A8MU46 457 aa18.87■□□□□ 0.61
NXF1-216ENST00000533499 PES1O00541 588 aaKnown RBP18.87■□□□□ 0.61
NXF1-216ENST00000533499 PODXLO00592 558 aa18.87■□□□□ 0.61
NXF1-216ENST00000533499 NRP1O14786 923 aa18.87■□□□□ 0.61
NXF1-216ENST00000533499 CDK11BP21127 795 aaKnown RBP18.87■□□□□ 0.61
NXF1-216ENST00000533499 GCLMP48507 274 aa18.87■□□□□ 0.61
NXF1-216ENST00000533499 CLCNKBP51801 687 aa18.87■□□□□ 0.61
NXF1-216ENST00000533499 FRMD5Q7Z6J6 570 aa18.87■□□□□ 0.61
NXF1-216ENST00000533499 NT5DC4Q86YG4 428 aa18.87■□□□□ 0.61
NXF1-216ENST00000533499 TMC2Q8TDI7 906 aa18.87■□□□□ 0.61
NXF1-216ENST00000533499 TSPAN18Q96SJ8 248 aa18.87■□□□□ 0.61
NXF1-216ENST00000533499 TMEM175Q9BSA9 504 aa18.87■□□□□ 0.61
NXF1-216ENST00000533499 COLEC11Q9BWP8 271 aa18.87■□□□□ 0.61
NXF1-216ENST00000533499 KIAA1671Q9BY89 1806 aa18.87■□□□□ 0.61
NXF1-216ENST00000533499 CBX8Q9HC52 389 aa18.87■□□□□ 0.61
NXF1-216ENST00000533499 NLRC5Q86WI3 1866 aa18.86■□□□□ 0.61
NXF1-216ENST00000533499 KCNJ18B7U540 433 aa18.86■□□□□ 0.61
NXF1-216ENST00000533499 ITGB3P05106 788 aa18.86■□□□□ 0.61
NXF1-216ENST00000533499 GALTP07902 379 aa18.86■□□□□ 0.61
NXF1-216ENST00000533499 POLR2BP30876 1174 aaKnown RBP18.86■□□□□ 0.61
NXF1-216ENST00000533499 DSC1Q08554 894 aa18.86■□□□□ 0.61
NXF1-216ENST00000533499 TRPC3Q13507 836 aa18.86■□□□□ 0.61
NXF1-216ENST00000533499 KCNJ12Q14500 433 aa18.86■□□□□ 0.61
NXF1-216ENST00000533499 NAB2Q15742 525 aa18.86■□□□□ 0.61
NXF1-216ENST00000533499 UROC1Q96N76 676 aa18.86■□□□□ 0.61
NXF1-216ENST00000533499 SPG21Q9NZD8 308 aa18.86■□□□□ 0.61
NXF1-216ENST00000533499 AGAP1Q9UPQ3 857 aa18.86■□□□□ 0.61
NXF1-216ENST00000533499 RWDD3Q9Y3V2 267 aa18.86■□□□□ 0.61
NXF1-216ENST00000533499 NUB1Q9Y5A7 615 aa18.86■□□□□ 0.61
NXF1-216ENST00000533499 F8W810 466 aa18.85■□□□□ 0.61
NXF1-216ENST00000533499 GOLGA6L19H0YKK7 550 aa18.85■□□□□ 0.61
NXF1-216ENST00000533499 SOX1O00570 391 aaPredicted RBP18.85■□□□□ 0.61
NXF1-216ENST00000533499 STX10O60499 249 aa18.85■□□□□ 0.61
NXF1-216ENST00000533499 TADA2AO75478 443 aa18.85■□□□□ 0.61
NXF1-216ENST00000533499 B3GAT3O94766 335 aa18.85■□□□□ 0.61
NXF1-216ENST00000533499 PRKCSHP14314 528 aaPredicted RBP18.85■□□□□ 0.61
NXF1-216ENST00000533499 CYP3A5P20815 502 aa18.85■□□□□ 0.61
NXF1-216ENST00000533499 BMPR1AP36894 532 aa18.85■□□□□ 0.61
NXF1-216ENST00000533499 TPM4P67936 248 aa18.85■□□□□ 0.61
NXF1-216ENST00000533499 ZBTB6Q15916 424 aa18.85■□□□□ 0.61
NXF1-216ENST00000533499 EPC2Q52LR7 807 aa18.85■□□□□ 0.61
NXF1-216ENST00000533499 TRAPPC11Q7Z392 1133 aa18.85■□□□□ 0.61
NXF1-216ENST00000533499 LUZP1Q86V48 1076 aa18.85■□□□□ 0.61
NXF1-216ENST00000533499 RNF214Q8ND24 703 aa18.85■□□□□ 0.61
NXF1-216ENST00000533499 FBXO22Q8NEZ5 403 aa18.85■□□□□ 0.61
NXF1-216ENST00000533499 ZNF516Q92618 1163 aa18.85■□□□□ 0.61
NXF1-216ENST00000533499 DDX27Q96GQ7 796 aaKnown RBP18.85■□□□□ 0.61
NXF1-216ENST00000533499 BORCS6Q96GS4 357 aa18.85■□□□□ 0.61
NXF1-216ENST00000533499 TMEM169Q96HH4 297 aa18.85■□□□□ 0.61
NXF1-216ENST00000533499 LRCH3Q96II8 777 aa18.85■□□□□ 0.61
NXF1-216ENST00000533499 BPIFA3Q9BQP9 254 aa18.85■□□□□ 0.61
NXF1-216ENST00000533499 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.85■□□□□ 0.61
NXF1-216ENST00000533499 MYO9BQ13459 2157 aa18.85■□□□□ 0.61
NXF1-216ENST00000533499 PPEF2O14830 753 aa18.84■□□□□ 0.61
NXF1-216ENST00000533499 KIF4AO95239 1232 aa18.84■□□□□ 0.61
NXF1-216ENST00000533499 CAVIN2O95810 425 aa18.84■□□□□ 0.61
NXF1-216ENST00000533499 RPL9P32969 192 aaKnown RBP18.84■□□□□ 0.61
NXF1-216ENST00000533499 CA8P35219 290 aa18.84■□□□□ 0.61
NXF1-216ENST00000533499 AP3M2P53677 418 aa18.84■□□□□ 0.61
NXF1-216ENST00000533499 ZNF445P59923 1031 aa18.84■□□□□ 0.61
NXF1-216ENST00000533499 RBP5P82980 135 aa18.84■□□□□ 0.61
NXF1-216ENST00000533499 PPP3CAQ08209 521 aa18.84■□□□□ 0.61
NXF1-216ENST00000533499 C9orf57Q5W0N0 161 aa18.84■□□□□ 0.61
NXF1-216ENST00000533499 DCLRE1AQ6PJP8 1040 aa18.84■□□□□ 0.61
NXF1-216ENST00000533499 IRF2BP1Q8IU81 584 aa18.84■□□□□ 0.61
NXF1-216ENST00000533499 DHX40Q8IX18 779 aaKnown RBP18.84■□□□□ 0.61
NXF1-216ENST00000533499 C1orf127Q8N9H9 656 aa18.84■□□□□ 0.61
NXF1-216ENST00000533499 KLHL23Q8NBE8 558 aa18.84■□□□□ 0.61
NXF1-216ENST00000533499 ANKRD20A12PQ8NF67 263 aa18.84■□□□□ 0.61
NXF1-216ENST00000533499 CLP1Q92989 425 aaKnown RBP18.84■□□□□ 0.61
NXF1-216ENST00000533499 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.84■□□□□ 0.612e-6■■■□□ 19.2
NXF1-216ENST00000533499 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.84■□□□□ 0.61
NXF1-216ENST00000533499 RANBP2P49792 3224 aaKnown RBP18.83■□□□□ 0.61
NXF1-216ENST00000533499 I3L4J1 428 aa18.83■□□□□ 0.6
NXF1-216ENST00000533499 IKBKBO14920 756 aa18.83■□□□□ 0.6
NXF1-216ENST00000533499 PPM1AP35813 382 aa18.83■□□□□ 0.6
NXF1-216ENST00000533499 PIK3CAP42336 1068 aa18.83■□□□□ 0.6
NXF1-216ENST00000533499 MXI1P50539 228 aa18.83■□□□□ 0.6
NXF1-216ENST00000533499 ERVK-21P61565 698 aa18.83■□□□□ 0.6
NXF1-216ENST00000533499 KRT17Q04695 432 aa18.83■□□□□ 0.6
NXF1-216ENST00000533499 NCAPHQ15003 741 aa18.83■□□□□ 0.6
NXF1-216ENST00000533499 UPP1Q16831 310 aa18.83■□□□□ 0.6
NXF1-216ENST00000533499 C1orf220Q5T0J3 134 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms