RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ASCC2Q9H1I8 757 aaPredicted RBP7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 EHMT1Q9H9B1 1298 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 PNMA6FA0A0J9YX94 578 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 FAM187AA6NFU0 413 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 LRRC53A6NM62 1247 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 RASA4BC9J798 803 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 POC1B-GALNT4F8VUJ3 575 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 IPO5O00410 1097 aaKnown RBP7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 RASA4O43374 803 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 GAS7O60861 476 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 CBFA2T3O75081 653 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 TOMM70O94826 608 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 CLPTM1O96005 669 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 PENKP01210 267 aaPredicted RBP7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 MMP1P03956 469 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 FDPSP14324 419 aaKnown RBP7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 ATP6V1B1P15313 513 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 PRCPP42785 496 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 GALK1P51570 392 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 ZNF280AP59817 542 aaPredicted RBP7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 MRPS9P82933 396 aaKnown RBP7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 C10orf76Q5T2E6 689 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 C1QTNF12Q5T7M4 302 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 CDKAL1Q5VV42 579 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 PDXDC1Q6P996 788 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 SV2BQ7L1I2 683 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 FASTKD5Q7L8L6 764 aaKnown RBP7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 CROCCP3Q8IVE0 287 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 WNK4Q96J92 1243 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 VPS33BQ9H267 617 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 PABPC3Q9H361 631 aaKnown RBP7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 C10orf88Q9H8K7 445 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 VPS37BQ9H9H4 285 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 PNMA3Q9UL41 463 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 HPS5Q9UPZ3 1129 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 F8VZ95 297 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 TDP2O95551 362 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 PCP11498 1178 aaKnown RBP7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 CETPP11597 493 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 MX2P20592 715 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 TNFAIP3P21580 790 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 PTPN4P29074 926 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 EPHB2P29323 1055 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 CNTN2Q02246 1040 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 CALCRLQ16602 461 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 RABGAP1LQ5R372 815 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 PRAMEF19Q5SWL8 479 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 NLRX1Q86UT6 975 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 RAET1EQ8TD07 263 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 ATXN2LQ8WWM7 1075 aaKnown RBP7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 YIPF2Q9BWQ6 316 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 RANBP17Q9H2T7 1088 aaKnown RBP7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 NMRK1Q9NWW6 199 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 NYAP2Q9P242 653 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 BARX2Q9UMQ3 279 aaPredicted RBP7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 CARD8Q9Y2G2 431 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 FRMD4BQ9Y2L6 1034 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 TMED5Q9Y3A6 229 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 A0A1B0GVG6 124 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 PP2D1A8MPX8 630 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 RBAK-RBAKDNI3L0D1 243 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 ITGA2BP08514 1039 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 ABCB4P21439 1286 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 SLC29A2Q14542 456 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 GJC2Q5T442 439 aaPredicted RBP7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 EIF1ADQ8N9N8 165 aaKnown RBP7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 HIPK4Q8NE63 616 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 RBM46Q8TBY0 533 aaKnown RBP7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 NLRP7Q8WX94 980 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 INPP5DQ92835 1189 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 PCDH18Q9HCL0 1135 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 SLC12A4Q9UP95 1085 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 PTPN22Q9Y2R2 807 aa7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.18□□□□□ -1.26
TGFBR3-209ENST00000532540 ARFGEF2Q9Y6D5 1785 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 PALM3A6NDB9 673 aaPredicted RBP7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 CYP11B2P19099 503 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 CTNNA2P26232 953 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 ADCY8P40145 1251 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 SKIV2L2P42285 1042 aaKnown RBP7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 RPS6P62753 249 aaKnown RBP7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 KCNMA1Q12791 1236 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 GRM4Q14833 912 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 C16orf72Q14CZ0 275 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 PSMD6Q15008 389 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 CCDC153Q494R4 210 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 C1orf228Q6PIY5 440 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 SCUBE1Q8IWY4 988 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 SIX5Q8N196 739 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 SNX29Q8TEQ0 813 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 PTPRN2Q92932 1015 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 LRGUKQ96M69 825 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 TMEM237Q96Q45 408 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 TEX13BQ9BXU2 312 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 EMILIN3Q9NT22 766 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 MAD2L2Q9UI95 211 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 TRIM33Q9UPN9 1127 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 ATP11BQ9Y2G3 1177 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 CYTH3O43739 400 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 ENTPD5O75356 428 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms