RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 HLA-DRAP01903 254 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 AMHP03971 560 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 THP07101 528 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 WDR5P61964 334 aaKnown RBP20.56■□□□□ 0.88
SMPD1-205ENST00000531303 LRMPQ12912 555 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 TRPC3Q13507 836 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 TMC6Q7Z403 805 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 NT5DC4Q86YG4 428 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 VSTM4Q8IW00 320 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 C1orf127Q8N9H9 656 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 SPC24Q8NBT2 197 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 FBXL13Q8NEE6 735 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 BEST2Q8NFU1 509 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 ERGIC2Q96RQ1 377 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.56■□□□□ 0.88
SMPD1-205ENST00000531303 PI4K2AQ9BTU6 479 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 INTS2Q9H0H0 1204 aaKnown RBP20.56■□□□□ 0.88
SMPD1-205ENST00000531303 GOLGA2P5Q9HBQ8 144 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 UBQLN1Q9UMX0 589 aaKnown RBP20.56■□□□□ 0.88
SMPD1-205ENST00000531303 P4HA2O15460 535 aa20.55■□□□□ 0.88
SMPD1-205ENST00000531303 CST3P01034 146 aaPredicted RBP20.55■□□□□ 0.88
SMPD1-205ENST00000531303 ITGB3P05106 788 aa20.55■□□□□ 0.88
SMPD1-205ENST00000531303 KCNJ6P48051 423 aa20.55■□□□□ 0.88
SMPD1-205ENST00000531303 SOX4Q06945 474 aaPredicted RBP20.55■□□□□ 0.88
SMPD1-205ENST00000531303 ZBTB6Q15916 424 aa20.55■□□□□ 0.88
SMPD1-205ENST00000531303 EPC2Q52LR7 807 aa20.55■□□□□ 0.88
SMPD1-205ENST00000531303 NOMO2Q5JPE7 1267 aa20.55■□□□□ 0.88
SMPD1-205ENST00000531303 TMEM240Q5SV17 173 aa20.55■□□□□ 0.88
SMPD1-205ENST00000531303 EHBP1Q8NDI1 1231 aa20.55■□□□□ 0.88
SMPD1-205ENST00000531303 URGCPQ8TCY9 931 aa20.55■□□□□ 0.88
SMPD1-205ENST00000531303 PPP1R10Q96QC0 940 aaKnown RBP20.55■□□□□ 0.88
SMPD1-205ENST00000531303 FAM207AQ9NSI2 230 aaPredicted RBP20.55■□□□□ 0.88
SMPD1-205ENST00000531303 RAB20Q9NX57 234 aa20.55■□□□□ 0.88
SMPD1-205ENST00000531303 CACNG4Q9UBN1 327 aa20.55■□□□□ 0.88
SMPD1-205ENST00000531303 SIK3Q9Y2K2 1263 aa20.55■□□□□ 0.88
SMPD1-205ENST00000531303 A0A1W2PQC6 194 aa20.54■□□□□ 0.88
SMPD1-205ENST00000531303 GTPBP10A4D1E9 387 aaKnown RBP20.54■□□□□ 0.88
SMPD1-205ENST00000531303 XPOTO43592 962 aaKnown RBP20.54■□□□□ 0.88
SMPD1-205ENST00000531303 EFCAB14O75071 495 aa20.54■□□□□ 0.88
SMPD1-205ENST00000531303 BAIAP3O94812 1187 aa20.54■□□□□ 0.88
SMPD1-205ENST00000531303 PON1P27169 355 aa20.54■□□□□ 0.88
SMPD1-205ENST00000531303 POLR2BP30876 1174 aaKnown RBP20.54■□□□□ 0.88
SMPD1-205ENST00000531303 PBX1P40424 430 aa20.54■□□□□ 0.88
SMPD1-205ENST00000531303 NCOA4Q13772 614 aa20.54■□□□□ 0.88
SMPD1-205ENST00000531303 RNF216Q9NWF9 866 aaPredicted RBP20.54■□□□□ 0.88
SMPD1-205ENST00000531303 SIX4Q9UIU6 781 aa20.54■□□□□ 0.88
SMPD1-205ENST00000531303 AGAP1Q9UPQ3 857 aa20.54■□□□□ 0.88
SMPD1-205ENST00000531303 R3HCC1Q9Y3T6 440 aaKnown RBP20.54■□□□□ 0.88
SMPD1-205ENST00000531303 TBKBP1A7MCY6 615 aa20.53■□□□□ 0.88
SMPD1-205ENST00000531303 MYL6P60660 151 aa20.53■□□□□ 0.88
SMPD1-205ENST00000531303 RNASELQ05823 741 aaKnown RBP20.53■□□□□ 0.88
SMPD1-205ENST00000531303 PAN2Q504Q3 1202 aaKnown RBP20.53■□□□□ 0.88
SMPD1-205ENST00000531303 PSRC1Q6PGN9 363 aaPredicted RBP20.53■□□□□ 0.88
SMPD1-205ENST00000531303 CRIPAKQ8N1N5 446 aa20.53■□□□□ 0.88
SMPD1-205ENST00000531303 RABGGTAQ92696 567 aa20.53■□□□□ 0.88
SMPD1-205ENST00000531303 TSPAN18Q96SJ8 248 aa20.53■□□□□ 0.88
SMPD1-205ENST00000531303 SLC38A7Q9NVC3 462 aa20.53■□□□□ 0.88
SMPD1-205ENST00000531303 COQ4Q9Y3A0 265 aa20.53■□□□□ 0.88
SMPD1-205ENST00000531303 SCN1AP35498 2009 aa20.52■□□□□ 0.88
SMPD1-205ENST00000531303 CASTOR2A6NHX0 329 aa20.52■□□□□ 0.88
SMPD1-205ENST00000531303 PMM2O15305 246 aa20.52■□□□□ 0.88
SMPD1-205ENST00000531303 HOXA2O43364 376 aa20.52■□□□□ 0.88
SMPD1-205ENST00000531303 RBP5P82980 135 aa20.52■□□□□ 0.88
SMPD1-205ENST00000531303 GRIK3Q13003 919 aa20.52■□□□□ 0.88
SMPD1-205ENST00000531303 SPECC1LQ69YQ0 1117 aa20.52■□□□□ 0.88
SMPD1-205ENST00000531303 SPOPLQ6IQ16 392 aa20.52■□□□□ 0.88
SMPD1-205ENST00000531303 TRIM65Q6PJ69 517 aa20.52■□□□□ 0.88
SMPD1-205ENST00000531303 NEK11Q8NG66 645 aa20.52■□□□□ 0.88
SMPD1-205ENST00000531303 LMO3Q8TAP4 145 aa20.52■□□□□ 0.88
SMPD1-205ENST00000531303 CPLX3Q8WVH0 158 aa20.52■□□□□ 0.88
SMPD1-205ENST00000531303 TOP1MTQ969P6 601 aa20.52■□□□□ 0.88
SMPD1-205ENST00000531303 CASD1Q96PB1 797 aa20.52■□□□□ 0.88
SMPD1-205ENST00000531303 CXXC1Q9P0U4 656 aaPredicted RBP20.52■□□□□ 0.88
SMPD1-205ENST00000531303 ITGA11Q9UKX5 1188 aa20.52■□□□□ 0.88
SMPD1-205ENST00000531303 FNDC1Q4ZHG4 1894 aaPredicted RBP20.52■□□□□ 0.88
SMPD1-205ENST00000531303 PTPRSQ13332 1948 aa20.51■□□□□ 0.87
SMPD1-205ENST00000531303 PPEF2O14830 753 aa20.51■□□□□ 0.87
SMPD1-205ENST00000531303 CAPN15O75808 1086 aa20.51■□□□□ 0.87
SMPD1-205ENST00000531303 CDC25BP30305 580 aa20.51■□□□□ 0.87
SMPD1-205ENST00000531303 MAGEA10P43363 369 aaPredicted RBP20.51■□□□□ 0.87
SMPD1-205ENST00000531303 WDR44Q5JSH3 913 aa20.51■□□□□ 0.87
SMPD1-205ENST00000531303 C9orf57Q5W0N0 161 aa20.51■□□□□ 0.87
SMPD1-205ENST00000531303 GJB7Q6PEY0 223 aa20.51■□□□□ 0.87
SMPD1-205ENST00000531303 TBC1D13Q9NVG8 400 aa20.51■□□□□ 0.87
SMPD1-205ENST00000531303 EPHB6O15197 1021 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 TRIM21P19474 475 aaKnown RBP20.5■□□□□ 0.87
SMPD1-205ENST00000531303 CYP3A5P20815 502 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 NAB2Q15742 525 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 ZNF280BQ86YH2 543 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 CCDC150Q8NCX0 1101 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 CXorf38Q8TB03 319 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 TATDN2Q93075 761 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 NT5C1BQ96P26 610 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 FAM193BQ96PV7 902 aaPredicted RBP20.5■□□□□ 0.87
SMPD1-205ENST00000531303 SIX2Q9NPC8 291 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 KANSL3Q9P2N6 904 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 INPPL1O15357 1258 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 ZNF699Q32M78 642 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 KLHDC7AQ5VTJ3 777 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 DPY19L2P1Q6NXN4 242 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms