RNA–Protein interactions for RNA: ENST00000531196.5

FGFR1-236, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-236ENST00000531196 NXPE3Q969Y0 559 aa11.91□□□□□ -0.5
FGFR1-236ENST00000531196 C18orf25Q96B23 403 aaPredicted RBP11.91□□□□□ -0.5
FGFR1-236ENST00000531196 PARVGQ9HBI0 331 aa11.91□□□□□ -0.5
FGFR1-236ENST00000531196 CDH7Q9ULB5 785 aa11.91□□□□□ -0.5
FGFR1-236ENST00000531196 CA14Q9ULX7 337 aa11.91□□□□□ -0.5
FGFR1-236ENST00000531196 ZFP37Q9Y6Q3 630 aaPredicted RBP11.91□□□□□ -0.5
FGFR1-236ENST00000531196 NUMBLQ9Y6R0 609 aa11.91□□□□□ -0.5
FGFR1-236ENST00000531196 SYN3O14994 580 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 CLTAP09496 248 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 SRFP11831 508 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 SCP2P22307 547 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 IGFBP6P24592 240 aaPredicted RBP11.9□□□□□ -0.5
FGFR1-236ENST00000531196 MARCKSP29966 332 aaPredicted RBP11.9□□□□□ -0.5
FGFR1-236ENST00000531196 TXLNAP40222 546 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 CLCN5P51795 746 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 NCKAP1LP55160 1127 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 ROR1Q01973 937 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 SPAG1Q07617 926 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 MCL1Q07820 350 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 MCM6Q14566 821 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 KYAT1Q16773 422 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 CTXN3Q4LDR2 81 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 PABPC1LQ4VXU2 614 aaKnown RBP11.9□□□□□ -0.5
FGFR1-236ENST00000531196 ARSHQ5FYA8 562 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 ZNF280DQ6N043 979 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 ALKAL1Q6UXT8 129 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 SLC44A3Q8N4M1 653 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 APPL2Q8NEU8 664 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 ST13P5Q8NFI4 369 aaPredicted RBP11.9□□□□□ -0.5
FGFR1-236ENST00000531196 LARP4BQ92615 738 aaKnown RBP11.9□□□□□ -0.5
FGFR1-236ENST00000531196 RAD54LQ92698 747 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 KIF12Q96FN5 646 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 PHOX2BQ99453 314 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 TUBGCP4Q9UGJ1 667 aa11.9□□□□□ -0.5
FGFR1-236ENST00000531196 MRPS23Q9Y3D9 190 aaKnown RBP11.9□□□□□ -0.5
FGFR1-236ENST00000531196 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.9□□□□□ -0.5
FGFR1-236ENST00000531196 XPOTO43592 962 aaKnown RBP11.89□□□□□ -0.51
FGFR1-236ENST00000531196 TRAK2O60296 914 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 PAPLNO95428 1278 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 CPB1P15086 417 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 AOC1P19801 751 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 ABCD1P33897 745 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 GRIN1Q05586 938 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 HTR4Q13639 388 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 UVSSAQ2YD98 709 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 SLC10A6Q3KNW5 377 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 CWF19L1Q69YN2 538 aaKnown RBP11.89□□□□□ -0.51
FGFR1-236ENST00000531196 SLC8B1Q6J4K2 584 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 CD300LGQ6UXG3 332 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 RSPO2Q6UXX9 243 aaPredicted RBP11.89□□□□□ -0.51
FGFR1-236ENST00000531196 MTSS1LQ765P7 747 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 KRI1Q8N9T8 703 aaKnown RBP11.89□□□□□ -0.51
FGFR1-236ENST00000531196 GPR152Q8TDT2 470 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 ING5Q8WYH8 240 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 FGF13Q92913 245 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 FAM212AQ96EL1 285 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 RTP3Q9BQQ7 232 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 MSTO1Q9BUK6 570 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 PLEKHA5Q9HAU0 1116 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 CYP4F11Q9HBI6 524 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 ARHGEF3Q9NR81 526 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 WNT16Q9UBV4 365 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 CCDC39Q9UFE4 941 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 TBX20Q9UMR3 447 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 UBQLN1Q9UMX0 589 aaKnown RBP11.89□□□□□ -0.51
FGFR1-236ENST00000531196 VWA8A3KMH1 1905 aa11.89□□□□□ -0.51
FGFR1-236ENST00000531196 WDR27A2RRH5 827 aa11.88□□□□□ -0.51
FGFR1-236ENST00000531196 TULP1O00294 542 aaPredicted RBP11.88□□□□□ -0.51
FGFR1-236ENST00000531196 POU2F2P09086 479 aa11.88□□□□□ -0.51
FGFR1-236ENST00000531196 CEBPZQ03701 1054 aaKnown RBP11.88□□□□□ -0.51
FGFR1-236ENST00000531196 CUL4AQ13619 759 aa11.88□□□□□ -0.51
FGFR1-236ENST00000531196 DSTYKQ6XUX3 929 aa11.88□□□□□ -0.51
FGFR1-236ENST00000531196 RTL10Q7L3V2 364 aa11.88□□□□□ -0.51
FGFR1-236ENST00000531196 USP37Q86T82 979 aa11.88□□□□□ -0.51
FGFR1-236ENST00000531196 ELMOD1Q8N336 334 aa11.88□□□□□ -0.51
FGFR1-236ENST00000531196 ZNF461Q8TAF7 563 aa11.88□□□□□ -0.51
FGFR1-236ENST00000531196 ITFG1Q8TB96 612 aa11.88□□□□□ -0.51
FGFR1-236ENST00000531196 SUSD3Q96L08 255 aa11.88□□□□□ -0.51
FGFR1-236ENST00000531196 RPF1Q9H9Y2 349 aaKnown RBP11.88□□□□□ -0.51
FGFR1-236ENST00000531196 TBC1D17Q9HA65 648 aa11.88□□□□□ -0.51
FGFR1-236ENST00000531196 FOXD4L1Q9NU39 408 aa11.88□□□□□ -0.51
FGFR1-236ENST00000531196 BLOC1S4Q9NUP1 217 aa11.88□□□□□ -0.51
FGFR1-236ENST00000531196 HCFC1R1Q9NWW0 138 aa11.88□□□□□ -0.51
FGFR1-236ENST00000531196 FBXL5Q9UKA1 691 aa11.88□□□□□ -0.51
FGFR1-236ENST00000531196 KCNH3Q9ULD8 1083 aa11.88□□□□□ -0.51
FGFR1-236ENST00000531196 PCDHB8Q9UN66 801 aa11.88□□□□□ -0.51
FGFR1-236ENST00000531196 MYH11P35749 1972 aa11.88□□□□□ -0.51
FGFR1-236ENST00000531196 MTCL1Q9Y4B5 1905 aaKnown RBP11.88□□□□□ -0.51
FGFR1-236ENST00000531196 CITO14578 2027 aa11.87□□□□□ -0.51
FGFR1-236ENST00000531196 DOCK8Q8NF50 2099 aa11.87□□□□□ -0.51
FGFR1-236ENST00000531196 ANHXE9PGG2 379 aa11.87□□□□□ -0.51
FGFR1-236ENST00000531196 OGTO15294 1046 aa11.87□□□□□ -0.51
FGFR1-236ENST00000531196 MEFVO15553 781 aaPredicted RBP11.87□□□□□ -0.51
FGFR1-236ENST00000531196 GFRA3O60609 400 aa11.87□□□□□ -0.51
FGFR1-236ENST00000531196 PIGRP01833 764 aa11.87□□□□□ -0.51
FGFR1-236ENST00000531196 NPR3P17342 541 aa11.87□□□□□ -0.51
FGFR1-236ENST00000531196 TNFSF9P41273 254 aa11.87□□□□□ -0.51
FGFR1-236ENST00000531196 ZNF131P52739 623 aa11.87□□□□□ -0.51
FGFR1-236ENST00000531196 YWHAHQ04917 246 aaPredicted RBP11.87□□□□□ -0.51
FGFR1-236ENST00000531196 SPECC1Q5M775 1068 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms