RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 TRIM11Q96F44 468 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 CYTH2Q99418 400 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 PSD3Q9NYI0 1048 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 PDGFRBP09619 1106 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 P4HA1P13674 534 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 ADORA2BP29275 332 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 RAP1GAPP47736 663 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 CORO7P57737 925 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 SLC15A2Q16348 729 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 Q4G0T1 1027 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 GLRA4Q5JXX5 417 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 DLK2Q6UY11 383 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 N4BP2L2Q92802 583 aaPredicted RBP13.11□□□□□ -0.31
SCN3B-206ENST00000530277 TTYH3Q9C0H2 523 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 HOXC10Q9NYD6 342 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 A0A1B0GUA9 196 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 FAM187AA6NFU0 413 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 SLC4A1P02730 911 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 ZNF844Q08AG5 666 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 OVGP1Q12889 678 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 UGCGQ16739 394 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 RPAINQ86UA6 219 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 DNAAF3Q8N9W5 541 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 SNF8Q96H20 258 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.1□□□□□ -0.31
SCN3B-206ENST00000530277 DCDC2CA8MYV0 355 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 ZSCAN5DPP0CG00 497 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 KRT3P12035 628 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 PRLRP16471 622 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 RPL21P46778 160 aaKnown RBP13.1□□□□□ -0.31
SCN3B-206ENST00000530277 DHX34Q14147 1143 aaKnown RBP13.1□□□□□ -0.31
SCN3B-206ENST00000530277 NXNQ6DKJ4 435 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 CATSPER4Q7RTX7 472 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 MKNK1Q9BUB5 465 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 TMEM8AQ9HCN3 771 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 CHST7Q9NS84 486 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 KIF13AQ9H1H9 1805 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 CPP00450 1065 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 ADRB2P07550 413 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 NLRP11P59045 1033 aaKnown RBP13.1□□□□□ -0.31
SCN3B-206ENST00000530277 BYSLQ13895 437 aaKnown RBP13.1□□□□□ -0.31
SCN3B-206ENST00000530277 DUOXA2Q1HG44 320 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 XKR3Q5GH77 459 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 SLFN12LQ6IEE8 588 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 OLFML3Q9NRN5 406 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 CHMP2BQ9UQN3 213 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 IGSF9BQ9UPX0 1349 aa13.1□□□□□ -0.31
SCN3B-206ENST00000530277 CST8O60676 142 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 RARAP10276 462 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 TXNP10599 105 aaKnown RBP13.09□□□□□ -0.31
SCN3B-206ENST00000530277 GPC3P51654 580 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 MUM1Q2TAK8 710 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 KDELC2Q7Z4H8 507 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 PPP1R36Q96LQ0 422 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 SCINQ9Y6U3 715 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 PRKCBP05771 671 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 APRTP07741 180 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 CDH8P55286 799 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 CRY2Q49AN0 593 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 PACS2Q86VP3 889 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 SPATS2Q86XZ4 545 aaKnown RBP13.09□□□□□ -0.31
SCN3B-206ENST00000530277 ATL2Q8NHH9 583 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 TMEM121Q9BTD3 319 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 DNAI2Q9GZS0 605 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 ERVK-5Q9HDB9 667 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 KLC4Q9NSK0 619 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 AGAP1Q9UPQ3 857 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 NUB1Q9Y5A7 615 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 PCDHB2Q9Y5E7 798 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 TCRBV7S2A1N4TA0A589 114 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 CFAP69A5D8W1 941 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 FAM107AO95990 144 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 C5P01031 1676 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 YWHAEP62258 255 aaKnown RBP13.09□□□□□ -0.31
SCN3B-206ENST00000530277 TFDP1Q14186 410 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 PPFIBP2Q8ND30 876 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 AGAP3Q96P47 875 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 INPP4AQ96PE3 977 aaPredicted RBP13.09□□□□□ -0.31
SCN3B-206ENST00000530277 PABPC3Q9H361 631 aaKnown RBP13.09□□□□□ -0.31
SCN3B-206ENST00000530277 CDC42EP4Q9H3Q1 356 aaKnown RBP13.09□□□□□ -0.31
SCN3B-206ENST00000530277 SLC38A10Q9HBR0 1119 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 PIH1D1Q9NWS0 290 aaKnown RBP13.09□□□□□ -0.31
SCN3B-206ENST00000530277 NEU2Q9Y3R4 380 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 PCDHGC5Q9Y5F6 944 aa13.09□□□□□ -0.31
SCN3B-206ENST00000530277 DISP2A7MBM2 1401 aa13.08□□□□□ -0.31
SCN3B-206ENST00000530277 ASTN2O75129 1339 aaPredicted RBP13.08□□□□□ -0.31
SCN3B-206ENST00000530277 CREB3O43889 395 aa13.08□□□□□ -0.31
SCN3B-206ENST00000530277 PSMD10O75832 226 aa13.08□□□□□ -0.31
SCN3B-206ENST00000530277 GJB1P08034 283 aa13.08□□□□□ -0.31
SCN3B-206ENST00000530277 BBOF1Q8ND07 529 aa13.08□□□□□ -0.31
SCN3B-206ENST00000530277 ZBTB10Q96DT7 871 aa13.08□□□□□ -0.31
SCN3B-206ENST00000530277 HSD17B14Q9BPX1 270 aa13.08□□□□□ -0.31
SCN3B-206ENST00000530277 NEUROG2Q9H2A3 272 aa13.08□□□□□ -0.31
SCN3B-206ENST00000530277 AGO4Q9HCK5 861 aaKnown RBP13.08□□□□□ -0.31
SCN3B-206ENST00000530277 CYP26B1Q9NR63 512 aa13.08□□□□□ -0.31
SCN3B-206ENST00000530277 GPATCH2LQ9NWQ4 482 aa13.08□□□□□ -0.31
SCN3B-206ENST00000530277 SNX9Q9Y5X1 595 aa13.08□□□□□ -0.31
SCN3B-206ENST00000530277 KDM3BQ7LBC6 1761 aa13.08□□□□□ -0.32
SCN3B-206ENST00000530277 LMO7Q8WWI1 1683 aa13.08□□□□□ -0.32
SCN3B-206ENST00000530277 GBP1P32455 592 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms