RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 CREMQ03060 361 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 AAMPQ13685 434 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 GAS6Q14393 721 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 AASDHQ4L235 1098 aaPredicted RBP3.91□□□□□ -1.78
PTPRC-213ENST00000529828 GLRA4Q5JXX5 417 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 RNF20Q5VTR2 975 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 IL31Q6EBC2 164 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 CNNM3Q8NE01 707 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 PIK3R5Q8WYR1 880 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 AIFM3Q96NN9 605 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 MTRQ99707 1265 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 EPAS1Q99814 870 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 CORO1BQ9BR76 489 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 CHRDQ9H2X0 955 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 XPNPEP1Q9NQW7 623 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 SNTG2Q9NY99 539 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 MRPS17Q9Y2R5 130 aaKnown RBP3.91□□□□□ -1.78
PTPRC-213ENST00000529828 CDY1Q9Y6F8 540 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 PIAS3Q9Y6X2 628 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 CCDC196A0A1B0GTZ2 297 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 C1QTNF9BB2RNN3 333 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 PTGESO14684 152 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 TBX3O15119 743 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 AXIN1O15169 862 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 C1QTNF9P0C862 333 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 SPINK2P20155 84 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 TKTP29401 623 aaKnown RBP3.9□□□□□ -1.78
PTPRC-213ENST00000529828 PMLP29590 882 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 CCR2P41597 374 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 PXNP49023 591 aaPredicted RBP3.9□□□□□ -1.78
PTPRC-213ENST00000529828 CCR3P51677 355 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 NCBP1Q09161 790 aaKnown RBP3.9□□□□□ -1.78
PTPRC-213ENST00000529828 TUSC3Q13454 348 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 NTRK3Q16288 839 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 CSRP2Q16527 193 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 FAM78AQ5JUQ0 283 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 SLC27A1Q6PCB7 646 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 CEP68Q76N32 757 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 TPH2Q8IWU9 490 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 HACE1Q8IYU2 909 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 FAM160A2Q8N612 972 aaPredicted RBP3.9□□□□□ -1.78
PTPRC-213ENST00000529828 CELF5Q8N6W0 485 aaKnown RBP3.9□□□□□ -1.78
PTPRC-213ENST00000529828 TCP11Q8WWU5 503 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 FAM3CQ92520 227 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 CCDC51Q96ER9 411 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 ZSWIM3Q96MP5 696 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 JAKMIP1Q96N16 626 aaKnown RBP3.9□□□□□ -1.78
PTPRC-213ENST00000529828 LARP6Q9BRS8 491 aaKnown RBP3.9□□□□□ -1.78
PTPRC-213ENST00000529828 ARRDC1-AS1Q9H2J1 176 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 GOLGA2P5Q9HBQ8 144 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 GPRC5CQ9NQ84 441 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 SH2B1Q9NRF2 756 aaPredicted RBP3.9□□□□□ -1.78
PTPRC-213ENST00000529828 PCDHA4Q9UN74 947 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 KCNJ14Q9UNX9 436 aa3.9□□□□□ -1.78
PTPRC-213ENST00000529828 TDRD15B5MCY1 1934 aaKnown RBP3.9□□□□□ -1.78
PTPRC-213ENST00000529828 FLNBO75369 2602 aaKnown RBP3.9□□□□□ -1.79
PTPRC-213ENST00000529828 BPTFQ12830 3046 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 CYP3A7-CYP3A51PA0A087WV96 503 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 FAM181BA6NEQ2 426 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 LRRIQ4A6NIV6 560 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 SLC38A8A6NNN8 435 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 WIPF1O43516 503 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 MARCH6O60337 910 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 CCNT1O60563 726 aaKnown RBP3.9□□□□□ -1.79
PTPRC-213ENST00000529828 USO1O60763 962 aaKnown RBP3.9□□□□□ -1.79
PTPRC-213ENST00000529828 WFS1O76024 890 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 RECQL4O94761 1208 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 LRG1P02750 347 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 EDN1P05305 212 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 PRKCBP05771 671 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 P4HBP07237 508 aaKnown RBP3.9□□□□□ -1.79
PTPRC-213ENST00000529828 GLRA2P23416 452 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 CYP3A7P24462 503 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 CCNE1P24864 410 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 AXLP30530 894 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 HOXA9P31269 272 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 BRCC3P46736 316 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 CXCL12P48061 93 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 NRLP54845 237 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 PRR20EP86478 221 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 PRR20CP86479 221 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 PRR20DP86480 221 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 PRR20BP86481 221 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 PRR20AP86496 221 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 PPP2R5CQ13362 524 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 WDR44Q5JSH3 913 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 LCE2AQ5TA79 106 aaPredicted RBP3.9□□□□□ -1.79
PTPRC-213ENST00000529828 TCEAL6Q6IPX3 200 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 VITQ6UXI7 678 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 PACS2Q86VP3 889 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 NOSTRINQ8IVI9 506 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 HS6ST3Q8IZP7 471 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 BLIDQ8IZY5 108 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 DNASE1L2Q92874 299 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 TCEAL3Q969E4 200 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 ELSPBP1Q96BH3 223 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 DDX27Q96GQ7 796 aaKnown RBP3.9□□□□□ -1.79
PTPRC-213ENST00000529828 CCDC43Q96MW1 224 aaKnown RBP3.9□□□□□ -1.79
PTPRC-213ENST00000529828 NELL2Q99435 816 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 TRMT61BQ9BVS5 477 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms