RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-216	ENST00000525506	CMA1	P23946	247 aa		11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	BRCC3	P46736	316 aa		11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	YARS	P54577	528 aa	Known RBP	11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	POU5F1	Q01860	360 aa	Known RBP	11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	PSMD5	Q16401	504 aa		11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	UPP1	Q16831	310 aa		11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	CCDC149	Q6ZUS6	474 aa		11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	BMP8A	Q7Z5Y6	402 aa		11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	ZDHHC14	Q8IZN3	488 aa		11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	CMAS	Q8NFW8	434 aa	Predicted RBP	11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	LEO1	Q8WVC0	666 aa	Predicted RBP	11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	SMG7	Q92540	1137 aa	Known RBP	11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	C18orf25	Q96B23	403 aa	Predicted RBP	11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	ZNF707	Q96C28	371 aa	Predicted RBP	11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	SPATA32	Q96LK8	384 aa		11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	MFSD14A	Q96MC6	490 aa		11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	ACAP3	Q96P50	834 aa		11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	TSPAN18	Q96SJ8	248 aa		11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	STRA6	Q9BX79	667 aa		11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	HAPLN2	Q9GZV7	340 aa		11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	USP25	Q9UHP3	1055 aa		11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	SORCS3	Q9UPU3	1222 aa		11.42	□□□□□ -0.58
RBBP4-216	ENST00000525506	HNRNPDL	O14979	420 aa	Known RBP	11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	CLDN3	O15551	220 aa		11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	B3GAT3	O94766	335 aa		11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	MYL1	P05976	194 aa		11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	KCNE1	P15382	129 aa		11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	TKT	P29401	623 aa	Known RBP	11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	MATR3	P43243	847 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	LIG4	P49917	911 aa		11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	VCP	P55072	806 aa	Known RBP	11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	MTMR3	Q13615	1198 aa		11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	DCLRE1A	Q6PJP8	1040 aa		11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	RSPO2	Q6UXX9	243 aa	Predicted RBP	11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	C15orf39	Q6ZRI6	1047 aa		11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	ZNF720	Q7Z2F6	126 aa		11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	CCDC65	Q8IXS2	484 aa		11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	PDILT	Q8N807	584 aa		11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	PIK3R5	Q8WYR1	880 aa		11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	SNX27	Q96L92	541 aa		11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	UROC1	Q96N76	676 aa		11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	MYADM	Q96S97	322 aa		11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	TRIM9	Q9C026	710 aa		11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	PLEKHA5	Q9HAU0	1116 aa		11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	SLC38A7	Q9NVC3	462 aa		11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	CNTN3	Q9P232	1028 aa		11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506	UST	Q9Y2C2	406 aa		11.41	□□□□□ -0.58
RBBP4-216	ENST00000525506		A0A1W2PQ27	194 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506		A0A1W2PQ64	194 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506		A0A1W2PQD8	194 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	TMEM189-UBE2V1	I3L0A0	370 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	POLR2D	O15514	142 aa	Known RBP	11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	C1R	P00736	705 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	FGFR3	P22607	806 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	GBP2	P32456	591 aa	Predicted RBP	11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	NTHL1	P78549	312 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	CREM	Q03060	361 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	SPAG1	Q07617	926 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	ELAVL2	Q12926	359 aa	Known RBP	11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	SLC10A6	Q3KNW5	377 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	SLFN12L	Q6IEE8	588 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	STXBP4	Q6ZWJ1	553 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	OTOP3	Q7RTS5	596 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	DYM	Q7RTS9	669 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	SFR1	Q86XK3	245 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	PLCD3	Q8N3E9	789 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	FBXL6	Q8N531	539 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	RSAD2	Q8WXG1	361 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	DHX58	Q96C10	678 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	ACSF2	Q96CM8	615 aa	Predicted RBP	11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	BICD1	Q96G01	975 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	C7orf25	Q9BPX7	421 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	PRKD2	Q9BZL6	878 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	ZHX3	Q9H4I2	956 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	PLEKHA4	Q9H4M7	779 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	MRPL44	Q9H9J2	332 aa	Known RBP	11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	PIDD1	Q9HB75	910 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	WDR6	Q9NNW5	1121 aa	Known RBP	11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	FBXW11	Q9UKB1	542 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	KCNH3	Q9ULD8	1083 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	EXOC7	Q9UPT5	735 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	HPSE	Q9Y251	543 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	PCDHB13	Q9Y5F0	798 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	STYXL1	Q9Y6J8	313 aa		11.4	□□□□□ -0.58
RBBP4-216	ENST00000525506	CLUH	O75153	1309 aa		11.39	□□□□□ -0.59
RBBP4-216	ENST00000525506		A0A0B4J269	797 aa		11.39	□□□□□ -0.59
RBBP4-216	ENST00000525506	PODXL	O00592	558 aa		11.39	□□□□□ -0.59
RBBP4-216	ENST00000525506	OGT	O15294	1046 aa		11.39	□□□□□ -0.59
RBBP4-216	ENST00000525506	EIF3D	O15371	548 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
RBBP4-216	ENST00000525506	CCL16	O15467	120 aa		11.39	□□□□□ -0.59
RBBP4-216	ENST00000525506	FAM189A1	O60320	539 aa		11.39	□□□□□ -0.59
RBBP4-216	ENST00000525506	ZMYND10	O75800	440 aa		11.39	□□□□□ -0.59
RBBP4-216	ENST00000525506	ADRB2	P07550	413 aa		11.39	□□□□□ -0.59

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