RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 MAGEF1Q9HAY2 307 aa20.15■□□□□ 0.82
TSPAN4-215ENST00000525334 MAN1C1Q9NR34 630 aa20.15■□□□□ 0.82
TSPAN4-215ENST00000525334 CPSF3Q9UKF6 684 aaKnown RBP20.15■□□□□ 0.82
TSPAN4-215ENST00000525334 EXOC7Q9UPT5 735 aa20.15■□□□□ 0.82
TSPAN4-215ENST00000525334 LOC730098B7Z3J9 87 aa20.14■□□□□ 0.81
TSPAN4-215ENST00000525334 GPR37L1O60883 481 aa20.14■□□□□ 0.81
TSPAN4-215ENST00000525334 RPL9P32969 192 aaKnown RBP20.14■□□□□ 0.81
TSPAN4-215ENST00000525334 ASIC1P78348 528 aa20.14■□□□□ 0.81
TSPAN4-215ENST00000525334 ALCAMQ13740 583 aa20.14■□□□□ 0.81
TSPAN4-215ENST00000525334 PSMD5Q16401 504 aa20.14■□□□□ 0.81
TSPAN4-215ENST00000525334 CNNM4Q6P4Q7 775 aa20.14■□□□□ 0.81
TSPAN4-215ENST00000525334 TMC5Q6UXY8 1006 aa20.14■□□□□ 0.81
TSPAN4-215ENST00000525334 PALB2Q86YC2 1186 aa20.14■□□□□ 0.81
TSPAN4-215ENST00000525334 TMEM130Q8N3G9 435 aa20.14■□□□□ 0.81
TSPAN4-215ENST00000525334 KCNH3Q9ULD8 1083 aa20.14■□□□□ 0.81
TSPAN4-215ENST00000525334 PCDHB13Q9Y5F0 798 aa20.14■□□□□ 0.81
TSPAN4-215ENST00000525334 TGM5O43548 720 aa20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 TRAPPC3O43617 180 aa20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 ADRB2P07550 413 aa20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 SPATA31D3P0C874 917 aa20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 TKTP29401 623 aaKnown RBP20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 ADSSP30520 456 aa20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 ACOT2P49753 483 aa20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 ZBTB6Q15916 424 aa20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 PDXDC1Q6P996 788 aa20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 SPATA31D4Q6ZUB0 917 aa20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 POMGNT1Q8WZA1 660 aa20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 HPS3Q969F9 1004 aa20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 FAM212AQ96EL1 285 aa20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 RPGRIP1Q96KN7 1286 aa20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 RIPOR3Q96MK2 946 aa20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 NECTIN4Q96NY8 510 aa20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 C7orf25Q9BPX7 421 aa20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 CLSTN3Q9BQT9 956 aa20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 POMKQ9H5K3 350 aa20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 C11orf16Q9NQ32 467 aa20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 AGO2Q9UKV8 859 aaKnown RBP20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 UBQLN1Q9UMX0 589 aaKnown RBP20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 ATP6V1DQ9Y5K8 247 aa20.13■□□□□ 0.81
TSPAN4-215ENST00000525334 DCXO43602 365 aa20.12■□□□□ 0.81
TSPAN4-215ENST00000525334 PRPF6O94906 941 aaKnown RBP20.12■□□□□ 0.81
TSPAN4-215ENST00000525334 C1RP00736 705 aa20.12■□□□□ 0.81
TSPAN4-215ENST00000525334 CASP1P29466 404 aa20.12■□□□□ 0.81
TSPAN4-215ENST00000525334 MTHFRP42898 656 aa20.12■□□□□ 0.81
TSPAN4-215ENST00000525334 TMEM31Q5JXX7 168 aa20.12■□□□□ 0.81
TSPAN4-215ENST00000525334 RNF135Q8IUD6 432 aa20.12■□□□□ 0.81
TSPAN4-215ENST00000525334 GLIS3Q8NEA6 775 aa20.12■□□□□ 0.81
TSPAN4-215ENST00000525334 PYM1Q9BRP8 204 aaKnown RBP20.12■□□□□ 0.81
TSPAN4-215ENST00000525334 LRFN3Q9BTN0 628 aa20.12■□□□□ 0.81
TSPAN4-215ENST00000525334 DPP7Q9UHL4 492 aa20.12■□□□□ 0.81
TSPAN4-215ENST00000525334 NUB1Q9Y5A7 615 aa20.12■□□□□ 0.81
TSPAN4-215ENST00000525334 ADAM12O43184 909 aa20.11■□□□□ 0.81
TSPAN4-215ENST00000525334 CYP3A5P20815 502 aa20.11■□□□□ 0.81
TSPAN4-215ENST00000525334 SP100P23497 879 aaPredicted RBP20.11■□□□□ 0.81
TSPAN4-215ENST00000525334 LRPAP1P30533 357 aa20.11■□□□□ 0.81
TSPAN4-215ENST00000525334 GUCY2FP51841 1108 aa20.11■□□□□ 0.81
TSPAN4-215ENST00000525334 POSTNQ15063 836 aa20.11■□□□□ 0.81
TSPAN4-215ENST00000525334 ATAT1Q5SQI0 421 aa20.11■□□□□ 0.81
TSPAN4-215ENST00000525334 JADE1Q6IE81 842 aa20.11■□□□□ 0.81
TSPAN4-215ENST00000525334 LILRA6Q6PI73 481 aa20.11■□□□□ 0.81
TSPAN4-215ENST00000525334 ELMSAN1Q6PJG2 1045 aa20.11■□□□□ 0.81
TSPAN4-215ENST00000525334 GPR149Q86SP6 731 aa20.11■□□□□ 0.81
TSPAN4-215ENST00000525334 CD302Q8IX05 232 aa20.11■□□□□ 0.81
TSPAN4-215ENST00000525334 SYCP3Q8IZU3 236 aa20.11■□□□□ 0.81
TSPAN4-215ENST00000525334 HDAC7Q8WUI4 952 aa20.11■□□□□ 0.81
TSPAN4-215ENST00000525334 TSPAN18Q96SJ8 248 aa20.11■□□□□ 0.81
TSPAN4-215ENST00000525334 BLZF1Q9H2G9 400 aa20.11■□□□□ 0.81
TSPAN4-215ENST00000525334 MTRRQ9UBK8 725 aa20.11■□□□□ 0.81
TSPAN4-215ENST00000525334 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.11■□□□□ 0.81
TSPAN4-215ENST00000525334 ANK1P16157 1881 aa20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 A0A1B0GVL5 298 aa20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 XPOTO43592 962 aaKnown RBP20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 RFPL2O75678 378 aa20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 NFICP08651 508 aa20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 PFKFB1P16118 471 aa20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 COL9A1P20849 921 aa20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 CMA1P23946 247 aa20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 MCM4P33991 863 aa20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 AFMP43652 599 aa20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 CRELD2Q6UXH1 353 aaPredicted RBP20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 STXBP4Q6ZWJ1 553 aa20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 UNC13DQ70J99 1090 aa20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 GRAMD1CQ8IYS0 662 aa20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 CEP57L1Q8IYX8 460 aa20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 KREMEN2Q8NCW0 462 aa20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 CMASQ8NFW8 434 aaPredicted RBP20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 PLEKHA4Q9H4M7 779 aa20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 TMEM206Q9H813 350 aa20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 SERTAD1Q9UHV2 236 aa20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 C2orf16Q68DN1 1984 aa20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 TCHHQ07283 1943 aa20.1■□□□□ 0.81
TSPAN4-215ENST00000525334 DENND4AQ7Z401 1863 aa20.09■□□□□ 0.81
TSPAN4-215ENST00000525334 SYN3O14994 580 aa20.09■□□□□ 0.81
TSPAN4-215ENST00000525334 ACTN4O43707 911 aaKnown RBP20.09■□□□□ 0.81
TSPAN4-215ENST00000525334 SLFN14P0C7P3 912 aa20.09■□□□□ 0.81
TSPAN4-215ENST00000525334 CUL4BQ13620 913 aa20.09■□□□□ 0.81
TSPAN4-215ENST00000525334 FAM26FQ5R3K3 315 aa20.09■□□□□ 0.81
TSPAN4-215ENST00000525334 VARS2Q5ST30 1063 aaKnown RBP20.09■□□□□ 0.81
TSPAN4-215ENST00000525334 SPATA1Q5VX52 437 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms