RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 CCDC105Q8IYK2 499 aa18.36■□□□□ 0.53
SPIDR-221ENST00000523814 FGF13Q92913 245 aa18.36■□□□□ 0.53
SPIDR-221ENST00000523814 RPP25Q9BUL9 199 aaKnown RBP18.36■□□□□ 0.53
SPIDR-221ENST00000523814 KCNH3Q9ULD8 1083 aa18.36■□□□□ 0.53
SPIDR-221ENST00000523814 POLIQ9UNA4 740 aa18.36■□□□□ 0.53
SPIDR-221ENST00000523814 ZFHX2Q9C0A1 2572 aaPredicted RBP18.36■□□□□ 0.53
SPIDR-221ENST00000523814 TRIP11Q15643 1979 aa18.35■□□□□ 0.53
SPIDR-221ENST00000523814 ARHGEF37A1IGU5 675 aa18.35■□□□□ 0.53
SPIDR-221ENST00000523814 GFRA3O60609 400 aa18.35■□□□□ 0.53
SPIDR-221ENST00000523814 HARSP12081 509 aaKnown RBP18.35■□□□□ 0.53
SPIDR-221ENST00000523814 SCP2P22307 547 aa18.35■□□□□ 0.53
SPIDR-221ENST00000523814 UBA7P41226 1012 aa18.35■□□□□ 0.53
SPIDR-221ENST00000523814 NCKAP1LP55160 1127 aa18.35■□□□□ 0.53
SPIDR-221ENST00000523814 SEZ6Q53EL9 994 aa18.35■□□□□ 0.53
SPIDR-221ENST00000523814 PARM1Q6UWI2 310 aa18.35■□□□□ 0.53
SPIDR-221ENST00000523814 HAUS6Q7Z4H7 955 aa18.35■□□□□ 0.53
SPIDR-221ENST00000523814 DTWD2Q8NBA8 298 aa18.35■□□□□ 0.53
SPIDR-221ENST00000523814 ITFG1Q8TB96 612 aa18.35■□□□□ 0.53
SPIDR-221ENST00000523814 GPR152Q8TDT2 470 aa18.35■□□□□ 0.53
SPIDR-221ENST00000523814 FGF14Q92915 247 aa18.35■□□□□ 0.53
SPIDR-221ENST00000523814 TBC1D32Q96NH3 1257 aa18.35■□□□□ 0.53
SPIDR-221ENST00000523814 PLEKHA5Q9HAU0 1116 aa18.35■□□□□ 0.53
SPIDR-221ENST00000523814 HCFC1R1Q9NWW0 138 aa18.35■□□□□ 0.53
SPIDR-221ENST00000523814 ANKFY1Q9P2R3 1169 aa18.35■□□□□ 0.53
SPIDR-221ENST00000523814 DNMT3BQ9UBC3 853 aaKnown RBP18.35■□□□□ 0.53
SPIDR-221ENST00000523814 ODF2LQ9ULJ1 636 aa18.35■□□□□ 0.53
SPIDR-221ENST00000523814 CA14Q9ULX7 337 aa18.35■□□□□ 0.53
SPIDR-221ENST00000523814 NUB1Q9Y5A7 615 aa18.35■□□□□ 0.53
SPIDR-221ENST00000523814 USP34Q70CQ2 3546 aa18.34■□□□□ 0.53
SPIDR-221ENST00000523814 H7C4K7 107 aa18.34■□□□□ 0.53
SPIDR-221ENST00000523814 STK25O00506 426 aa18.34■□□□□ 0.53
SPIDR-221ENST00000523814 BMP15O95972 392 aa18.34■□□□□ 0.53
SPIDR-221ENST00000523814 CLTAP09496 248 aa18.34■□□□□ 0.53
SPIDR-221ENST00000523814 ROR1Q01973 937 aa18.34■□□□□ 0.53
SPIDR-221ENST00000523814 PABPC1LQ4VXU2 614 aaKnown RBP18.34■□□□□ 0.53
SPIDR-221ENST00000523814 PHLDB3Q6NSJ2 640 aa18.34■□□□□ 0.53
SPIDR-221ENST00000523814 MTSS1LQ765P7 747 aa18.34■□□□□ 0.53
SPIDR-221ENST00000523814 BRAPQ7Z569 592 aa18.34■□□□□ 0.53
SPIDR-221ENST00000523814 TCEAL8Q8IYN2 117 aa18.34■□□□□ 0.53
SPIDR-221ENST00000523814 CALML4Q96GE6 196 aa18.34■□□□□ 0.53
SPIDR-221ENST00000523814 SUSD3Q96L08 255 aa18.34■□□□□ 0.53
SPIDR-221ENST00000523814 HAPLN2Q9GZV7 340 aa18.34■□□□□ 0.53
SPIDR-221ENST00000523814 AVENQ9NQS1 362 aaPredicted RBP18.34■□□□□ 0.53
SPIDR-221ENST00000523814 TTC26A0AVF1 554 aa18.33■□□□□ 0.52
SPIDR-221ENST00000523814 ATF2P15336 505 aa18.33■□□□□ 0.52
SPIDR-221ENST00000523814 LONP1P36776 959 aaKnown RBP18.33■□□□□ 0.52
SPIDR-221ENST00000523814 CACNB1Q02641 598 aaPredicted RBP18.33■□□□□ 0.52
SPIDR-221ENST00000523814 ZBTB6Q15916 424 aa18.33■□□□□ 0.52
SPIDR-221ENST00000523814 ST13P5Q8NFI4 369 aaPredicted RBP18.33■□□□□ 0.52
SPIDR-221ENST00000523814 LRRC15Q8TF66 581 aa18.33■□□□□ 0.52
SPIDR-221ENST00000523814 REEP2Q9BRK0 252 aa18.33■□□□□ 0.52
SPIDR-221ENST00000523814 TBC1D17Q9HA65 648 aa18.33■□□□□ 0.52
SPIDR-221ENST00000523814 BLOC1S4Q9NUP1 217 aa18.33■□□□□ 0.52
SPIDR-221ENST00000523814 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.33■□□□□ 0.52
SPIDR-221ENST00000523814 DOCK6Q96HP0 2047 aa18.33■□□□□ 0.52
SPIDR-221ENST00000523814 WDR27A2RRH5 827 aa18.32■□□□□ 0.52
SPIDR-221ENST00000523814 PTPN2P17706 415 aa18.32■□□□□ 0.52
SPIDR-221ENST00000523814 ELF1P32519 619 aa18.32■□□□□ 0.52
SPIDR-221ENST00000523814 ZNF131P52739 623 aa18.32■□□□□ 0.52
SPIDR-221ENST00000523814 GPC5P78333 572 aa18.32■□□□□ 0.52
SPIDR-221ENST00000523814 KYAT1Q16773 422 aa18.32■□□□□ 0.52
SPIDR-221ENST00000523814 TPGS2Q68CL5 300 aa18.32■□□□□ 0.52
SPIDR-221ENST00000523814 GPBP1Q86WP2 473 aa18.32■□□□□ 0.52
SPIDR-221ENST00000523814 NPAS3Q8IXF0 933 aa18.32■□□□□ 0.52
SPIDR-221ENST00000523814 APPL2Q8NEU8 664 aa18.32■□□□□ 0.52
SPIDR-221ENST00000523814 ARHGEF3Q9NR81 526 aa18.32■□□□□ 0.52
SPIDR-221ENST00000523814 GDE1Q9NZC3 331 aa18.32■□□□□ 0.52
SPIDR-221ENST00000523814 FBXL5Q9UKA1 691 aa18.32■□□□□ 0.52
SPIDR-221ENST00000523814 MAFFQ9ULX9 164 aa18.32■□□□□ 0.52
SPIDR-221ENST00000523814 TBX20Q9UMR3 447 aa18.32■□□□□ 0.52
SPIDR-221ENST00000523814 PRRG1O14668 218 aa18.31■□□□□ 0.52
SPIDR-221ENST00000523814 PIGRP01833 764 aa18.31■□□□□ 0.52
SPIDR-221ENST00000523814 ADRB2P07550 413 aa18.31■□□□□ 0.52
SPIDR-221ENST00000523814 RHOP08100 348 aa18.31■□□□□ 0.52
SPIDR-221ENST00000523814 CXCL8P10145 99 aa18.31■□□□□ 0.52
SPIDR-221ENST00000523814 CYP3A5P20815 502 aa18.31■□□□□ 0.52
SPIDR-221ENST00000523814 MATR3P43243 847 aaKnown RBP eCLIP18.31■□□□□ 0.522e-8■■■■■ 27.6
SPIDR-221ENST00000523814 STARD6P59095 220 aa18.31■□□□□ 0.52
SPIDR-221ENST00000523814 ANGPT1Q15389 498 aa18.31■□□□□ 0.52
SPIDR-221ENST00000523814 CTXN3Q4LDR2 81 aa18.31■□□□□ 0.52
SPIDR-221ENST00000523814 MYCT1Q8N699 235 aa18.31■□□□□ 0.52
SPIDR-221ENST00000523814 RAD54LQ92698 747 aa18.31■□□□□ 0.52
SPIDR-221ENST00000523814 DDX12PQ92771 950 aa18.31■□□□□ 0.52
SPIDR-221ENST00000523814 BICD1Q96G01 975 aa18.31■□□□□ 0.52
SPIDR-221ENST00000523814 TSPAN18Q96SJ8 248 aa18.31■□□□□ 0.52
SPIDR-221ENST00000523814 PARVGQ9HBI0 331 aa18.31■□□□□ 0.52
SPIDR-221ENST00000523814 TUBGCP4Q9UGJ1 667 aa18.31■□□□□ 0.52
SPIDR-221ENST00000523814 PCDHB8Q9UN66 801 aa18.31■□□□□ 0.52
SPIDR-221ENST00000523814 MRPS23Q9Y3D9 190 aaKnown RBP18.31■□□□□ 0.52
SPIDR-221ENST00000523814 SIT1Q9Y3P8 196 aa18.31■□□□□ 0.52
SPIDR-221ENST00000523814 M0QZQ0 153 aa18.3■□□□□ 0.52
SPIDR-221ENST00000523814 FAM189A1O60320 539 aa18.3■□□□□ 0.52
SPIDR-221ENST00000523814 OAZ2O95190 189 aa18.3■□□□□ 0.52
SPIDR-221ENST00000523814 SEC24AO95486 1093 aa18.3■□□□□ 0.52
SPIDR-221ENST00000523814 LRG1P02750 347 aa18.3■□□□□ 0.52
SPIDR-221ENST00000523814 PLCG1P19174 1290 aa18.3■□□□□ 0.52
SPIDR-221ENST00000523814 RFX1P22670 979 aa18.3■□□□□ 0.52
SPIDR-221ENST00000523814 MARCKSP29966 332 aaPredicted RBP18.3■□□□□ 0.52
SPIDR-221ENST00000523814 LRPAP1P30533 357 aa18.3■□□□□ 0.52
SPIDR-221ENST00000523814 MCM4P33991 863 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms