RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 ALDH5A1P51649 535 aaPredicted RBP13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 SMAD1Q15797 465 aaKnown RBP13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 IZUMO3Q5VZ72 239 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 APPL2Q8NEU8 664 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 ZNF507Q8TCN5 953 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 PHLPP1O60346 1717 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 IRF6O14896 467 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 BNIP3LO60238 219 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 GARTP22102 1010 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 CASP5P51878 434 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 SLC12A3P55017 1021 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 CUL2Q13617 745 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 PPM1EQ8WY54 764 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 DHX38Q92620 1227 aaKnown RBP13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 SENP7Q9BQF6 1050 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 NT5C1AQ9BXI3 368 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 GPBP1L1Q9HC44 474 aaPredicted RBP13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 MLXIPLQ9NP71 852 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 FRMPD4Q14CM0 1322 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 RRN3P2A6NIE6 340 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 TISP43B9A030 160 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 SLC1A1P43005 524 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 CACNB2Q08289 660 aaPredicted RBP13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 SRRM1Q8IYB3 904 aaKnown RBP13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 PPFIBP2Q8ND30 876 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 C1orf131Q8NDD1 294 aaKnown RBP13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 TNFRSF25Q93038 417 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 ZBED2Q9BTP6 218 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 TRAF3IP3Q9Y228 551 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 KLRC4O43908 158 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 NPM3O75607 178 aaKnown RBP13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 MAGOHP61326 146 aaKnown RBP13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 TAP1Q03518 808 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 ZNF571Q7Z3V5 609 aaPredicted RBP13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 DDX42Q86XP3 938 aaKnown RBP eCLIP13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 DCLK2Q8N568 766 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 PFDN4Q9NQP4 134 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 DDX56Q9NY93 547 aaKnown RBP13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 SYNPO2Q9UMS6 1093 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 ADAMTSL3P82987 1691 aa13.84□□□□□ -0.19
PCDHGB1-201ENST00000523390 TARSL2A2RTX5 802 aaKnown RBP13.83□□□□□ -0.19
PCDHGB1-201ENST00000523390 PPP1R11O60927 126 aaPredicted RBP13.83□□□□□ -0.19
PCDHGB1-201ENST00000523390 MMEP08473 750 aa13.83□□□□□ -0.19
PCDHGB1-201ENST00000523390 ZNF286BP0CG31 522 aa13.83□□□□□ -0.19
PCDHGB1-201ENST00000523390 OAZ1P54368 228 aa13.83□□□□□ -0.19
PCDHGB1-201ENST00000523390 DHX34Q14147 1143 aaKnown RBP13.83□□□□□ -0.19
PCDHGB1-201ENST00000523390 SPOPLQ6IQ16 392 aa13.83□□□□□ -0.19
PCDHGB1-201ENST00000523390 MCUQ8NE86 351 aa13.83□□□□□ -0.19
PCDHGB1-201ENST00000523390 SLC35C1Q96A29 364 aa13.83□□□□□ -0.19
PCDHGB1-201ENST00000523390 LCMT1Q9UIC8 334 aa13.83□□□□□ -0.19
PCDHGB1-201ENST00000523390 A0A087WZ62 844 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 H3BRB1 525 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 MYO1CO00159 1063 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 ARSEP51690 589 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 EFHC2Q5JST6 749 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 CYP4A22Q5TCH4 519 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 NIPA1Q7RTP0 329 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 MICAL1Q8TDZ2 1067 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 BTBD6Q96KE9 485 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 FDXACB1Q9BRP7 624 aaPredicted RBP13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 CELF4Q9BZC1 486 aaKnown RBP13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 TUT1Q9H6E5 874 aaKnown RBP13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 CNOT10Q9H9A5 744 aaKnown RBP13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 TRIM66O15016 1216 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 PSMD10O75832 226 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 INSRRP14616 1297 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 CPB1P15086 417 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 SYCP2LQ5T4T6 812 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 HEATR6Q6AI08 1181 aaKnown RBP13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 NOTUMQ6P988 496 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 VSIG10LQ86VR7 867 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 TPCN2Q8NHX9 752 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 IPO11Q9UI26 975 aaKnown RBP13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 GTF3C4Q9UKN8 822 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 F8VZ95 297 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 RAD51CO43502 376 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 GSTA1P08263 222 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 GSTA2P09210 222 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 CYP24A1Q07973 514 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 ZNF484Q5JVG2 852 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 KIAA1755Q5JYT7 1200 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 SLC20A1Q8WUM9 679 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 MMTAG2Q9BU76 263 aaKnown RBP13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 ZNF446Q9NWS9 450 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 WDR35Q9P2L0 1181 aa13.83□□□□□ -0.2
PCDHGB1-201ENST00000523390 RASA4BC9J798 803 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 RASA4O43374 803 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 TGFB3P10600 412 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 PDIA2Q13087 525 aaKnown RBP13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 AMHR2Q16671 573 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 ATP8B4Q8TF62 1192 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 OSBPL8Q9BZF1 889 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 ITGA4P13612 1032 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 ITGB5P18084 799 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 FGFR4P22455 802 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 ROR1Q01973 937 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 PPATQ06203 517 aa13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 THOC5Q13769 683 aaKnown RBP13.82□□□□□ -0.2
PCDHGB1-201ENST00000523390 SMTNL2Q2TAL5 461 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms