RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 TMEM130Q8N3G9 435 aa22.47■■□□□ 1.19
TRIM35-203ENST00000521253 FSIP1Q8NA03 581 aa22.47■■□□□ 1.19
TRIM35-203ENST00000521253 TTPALQ9BTX7 342 aa22.47■■□□□ 1.19
TRIM35-203ENST00000521253 TMEM206Q9H813 350 aa22.47■■□□□ 1.19
TRIM35-203ENST00000521253 ADH1AP07327 375 aa22.46■■□□□ 1.19
TRIM35-203ENST00000521253 SYKP43405 635 aa22.46■■□□□ 1.19
TRIM35-203ENST00000521253 ZBTB6Q15916 424 aa22.46■■□□□ 1.19
TRIM35-203ENST00000521253 PRSS55Q6UWB4 352 aaPredicted RBP22.46■■□□□ 1.19
TRIM35-203ENST00000521253 FAM212AQ96EL1 285 aa22.46■■□□□ 1.19
TRIM35-203ENST00000521253 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.46■■□□□ 1.19
TRIM35-203ENST00000521253 DZANK1Q9NVP4 752 aa22.46■■□□□ 1.19
TRIM35-203ENST00000521253 USP25Q9UHP3 1055 aa22.46■■□□□ 1.19
TRIM35-203ENST00000521253 CITO14578 2027 aa22.45■■□□□ 1.18
TRIM35-203ENST00000521253 PVALEFA0A1B0GWK0 134 aa22.45■■□□□ 1.18
TRIM35-203ENST00000521253 I3L4J1 428 aa22.45■■□□□ 1.18
TRIM35-203ENST00000521253 TNFRSF10AO00220 468 aa22.45■■□□□ 1.18
TRIM35-203ENST00000521253 RPL17P18621 184 aaKnown RBP22.45■■□□□ 1.18
TRIM35-203ENST00000521253 BRCC3P46736 316 aa22.45■■□□□ 1.18
TRIM35-203ENST00000521253 CRELD2Q6UXH1 353 aaPredicted RBP22.45■■□□□ 1.18
TRIM35-203ENST00000521253 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.45■■□□□ 1.18
TRIM35-203ENST00000521253 EPM2AIP1Q7L775 607 aaPredicted RBP22.45■■□□□ 1.18
TRIM35-203ENST00000521253 CD302Q8IX05 232 aa22.45■■□□□ 1.18
TRIM35-203ENST00000521253 C12orf76Q8N812 135 aaPredicted RBP22.45■■□□□ 1.18
TRIM35-203ENST00000521253 LNX1Q8TBB1 728 aaPredicted RBP22.45■■□□□ 1.18
TRIM35-203ENST00000521253 PIK3R5Q8WYR1 880 aa22.45■■□□□ 1.18
TRIM35-203ENST00000521253 SUSD6Q92537 303 aa22.45■■□□□ 1.18
TRIM35-203ENST00000521253 FBXL18Q96ME1 805 aa22.45■■□□□ 1.18
TRIM35-203ENST00000521253 GOLPH3LQ9H4A5 285 aa22.45■■□□□ 1.18
TRIM35-203ENST00000521253 CD320Q9NPF0 282 aa22.45■■□□□ 1.18
TRIM35-203ENST00000521253 FNIP2Q9P278 1114 aa22.45■■□□□ 1.18
TRIM35-203ENST00000521253 UBQLN1Q9UMX0 589 aaKnown RBP22.45■■□□□ 1.18
TRIM35-203ENST00000521253 TRAPPC3O43617 180 aa22.44■■□□□ 1.18
TRIM35-203ENST00000521253 GARTP22102 1010 aa22.44■■□□□ 1.18
TRIM35-203ENST00000521253 FGFR3P22607 806 aa22.44■■□□□ 1.18
TRIM35-203ENST00000521253 HOXD13P35453 343 aa22.44■■□□□ 1.18
TRIM35-203ENST00000521253 CREMQ03060 361 aa22.44■■□□□ 1.18
TRIM35-203ENST00000521253 ZP2Q05996 745 aa22.44■■□□□ 1.18
TRIM35-203ENST00000521253 PSMD5Q16401 504 aa22.44■■□□□ 1.18
TRIM35-203ENST00000521253 JADE1Q6IE81 842 aa22.44■■□□□ 1.18
TRIM35-203ENST00000521253 ADHFE1Q8IWW8 467 aa22.44■■□□□ 1.18
TRIM35-203ENST00000521253 ZSWIM2Q8NEG5 633 aa22.44■■□□□ 1.18
TRIM35-203ENST00000521253 SAAL1Q96ER3 474 aa22.44■■□□□ 1.18
TRIM35-203ENST00000521253 TSPAN18Q96SJ8 248 aa22.44■■□□□ 1.18
TRIM35-203ENST00000521253 CBWD1Q9BRT8 395 aa22.44■■□□□ 1.18
TRIM35-203ENST00000521253 PRKAG3Q9UGI9 489 aa22.44■■□□□ 1.18
TRIM35-203ENST00000521253 EIF3DO15371 548 aaKnown RBP eCLIP22.43■■□□□ 1.18
TRIM35-203ENST00000521253 GLUD1P00367 558 aa22.43■■□□□ 1.18
TRIM35-203ENST00000521253 NFICP08651 508 aa22.43■■□□□ 1.18
TRIM35-203ENST00000521253 CYP3A5P20815 502 aa22.43■■□□□ 1.18
TRIM35-203ENST00000521253 TKTP29401 623 aaKnown RBP22.43■■□□□ 1.18
TRIM35-203ENST00000521253 LRPAP1P30533 357 aa22.43■■□□□ 1.18
TRIM35-203ENST00000521253 GUCY2FP51841 1108 aa22.43■■□□□ 1.18
TRIM35-203ENST00000521253 POU5F1Q01860 360 aaKnown RBP22.43■■□□□ 1.18
TRIM35-203ENST00000521253 RARS2Q5T160 578 aaKnown RBP22.43■■□□□ 1.18
TRIM35-203ENST00000521253 KANK3Q6NY19 840 aa22.43■■□□□ 1.18
TRIM35-203ENST00000521253 PALB2Q86YC2 1186 aa22.43■■□□□ 1.18
TRIM35-203ENST00000521253 GLYCTKQ8IVS8 523 aa22.43■■□□□ 1.18
TRIM35-203ENST00000521253 ZNF507Q8TCN5 953 aa22.43■■□□□ 1.18
TRIM35-203ENST00000521253 FAM213AQ9BRX8 229 aa22.43■■□□□ 1.18
TRIM35-203ENST00000521253 ADAM7Q9H2U9 754 aa22.43■■□□□ 1.18
TRIM35-203ENST00000521253 ASB7Q9H672 318 aa22.43■■□□□ 1.18
TRIM35-203ENST00000521253 CDH22Q9UJ99 828 aa22.43■■□□□ 1.18
TRIM35-203ENST00000521253 NUB1Q9Y5A7 615 aa22.43■■□□□ 1.18
TRIM35-203ENST00000521253 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.43■■□□□ 1.18
TRIM35-203ENST00000521253 TCHHQ07283 1943 aa22.43■■□□□ 1.18
TRIM35-203ENST00000521253 XPOTO43592 962 aaKnown RBP22.42■■□□□ 1.18
TRIM35-203ENST00000521253 KLRC4O43908 158 aa22.42■■□□□ 1.18
TRIM35-203ENST00000521253 ITIH3Q06033 890 aa22.42■■□□□ 1.18
TRIM35-203ENST00000521253 CBX2Q14781 532 aaPredicted RBP22.42■■□□□ 1.18
TRIM35-203ENST00000521253 TMEM132DQ14C87 1099 aa22.42■■□□□ 1.18
TRIM35-203ENST00000521253 SPATA1Q5VX52 437 aa22.42■■□□□ 1.18
TRIM35-203ENST00000521253 GJD3Q8N144 294 aa22.42■■□□□ 1.18
TRIM35-203ENST00000521253 SCFD1Q8WVM8 642 aa22.42■■□□□ 1.18
TRIM35-203ENST00000521253 CLSTN3Q9BQT9 956 aa22.42■■□□□ 1.18
TRIM35-203ENST00000521253 PCIF1Q9H4Z3 704 aa22.42■■□□□ 1.18
TRIM35-203ENST00000521253 SLC39A2Q9NP94 309 aa22.42■■□□□ 1.18
TRIM35-203ENST00000521253 MAN1C1Q9NR34 630 aa22.42■■□□□ 1.18
TRIM35-203ENST00000521253 DERAQ9Y315 318 aa22.42■■□□□ 1.18
TRIM35-203ENST00000521253 TGM5O43548 720 aa22.41■■□□□ 1.18
TRIM35-203ENST00000521253 SSTR3P32745 418 aaPredicted RBP22.41■■□□□ 1.18
TRIM35-203ENST00000521253 CES5AQ6NT32 575 aa22.41■■□□□ 1.18
TRIM35-203ENST00000521253 ARMCX5Q6P1M9 558 aa22.41■■□□□ 1.18
TRIM35-203ENST00000521253 PDXDC1Q6P996 788 aa22.41■■□□□ 1.18
TRIM35-203ENST00000521253 BEST2Q8NFU1 509 aa22.41■■□□□ 1.18
TRIM35-203ENST00000521253 FEZF2Q8TBJ5 459 aa22.41■■□□□ 1.18
TRIM35-203ENST00000521253 SFXN1Q9H9B4 322 aa22.41■■□□□ 1.18
TRIM35-203ENST00000521253 C2CD2Q9Y426 696 aa22.41■■□□□ 1.18
TRIM35-203ENST00000521253 UBE4BO95155 1302 aa22.4■■□□□ 1.18
TRIM35-203ENST00000521253 GOLGA8IPA6NC78 632 aa22.4■■□□□ 1.18
TRIM35-203ENST00000521253 C19orf67A6NJJ6 358 aa22.4■■□□□ 1.18
TRIM35-203ENST00000521253 GOLGA8JA6NMD2 632 aa22.4■■□□□ 1.18
TRIM35-203ENST00000521253 ADAM12O43184 909 aa22.4■■□□□ 1.18
TRIM35-203ENST00000521253 LDHAP00338 332 aaKnown RBP22.4■■□□□ 1.18
TRIM35-203ENST00000521253 MYL1P05976 194 aa22.4■■□□□ 1.18
TRIM35-203ENST00000521253 WEE2P0C1S8 567 aa22.4■■□□□ 1.18
TRIM35-203ENST00000521253 SPATA31D3P0C874 917 aa22.4■■□□□ 1.18
TRIM35-203ENST00000521253 MCM4P33991 863 aa22.4■■□□□ 1.18
TRIM35-203ENST00000521253 LILRA6Q6PI73 481 aa22.4■■□□□ 1.18
TRIM35-203ENST00000521253 TMC5Q6UXY8 1006 aa22.4■■□□□ 1.18
TRIM35-203ENST00000521253 SPATA31D4Q6ZUB0 917 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms