RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 MYH11P35749 1972 aa21.48■■□□□ 1.03
PABPC1-215ENST00000520804 SYN3O14994 580 aa21.48■■□□□ 1.03
PABPC1-215ENST00000520804 RFX1P22670 979 aa21.48■■□□□ 1.03
PABPC1-215ENST00000520804 ROR1Q01973 937 aa21.48■■□□□ 1.03
PABPC1-215ENST00000520804 NOLC1Q14978 699 aaKnown RBP eCLIP21.48■■□□□ 1.03
PABPC1-215ENST00000520804 SLC10A6Q3KNW5 377 aa21.48■■□□□ 1.03
PABPC1-215ENST00000520804 TMEM119Q4V9L6 283 aa21.48■■□□□ 1.03
PABPC1-215ENST00000520804 PHLDB3Q6NSJ2 640 aa21.48■■□□□ 1.03
PABPC1-215ENST00000520804 MTSS1LQ765P7 747 aa21.48■■□□□ 1.03
PABPC1-215ENST00000520804 ASCL5Q7RTU5 278 aa21.48■■□□□ 1.03
PABPC1-215ENST00000520804 ZNF461Q8TAF7 563 aa21.48■■□□□ 1.03
PABPC1-215ENST00000520804 C18orf25Q96B23 403 aaPredicted RBP21.48■■□□□ 1.03
PABPC1-215ENST00000520804 ANKFY1Q9P2R3 1169 aa21.48■■□□□ 1.03
PABPC1-215ENST00000520804 KCNH3Q9ULD8 1083 aa21.48■■□□□ 1.03
PABPC1-215ENST00000520804 NOTCH4Q99466 2003 aa21.47■■□□□ 1.03
PABPC1-215ENST00000520804 TBC1D4O60343 1298 aa21.47■■□□□ 1.03
PABPC1-215ENST00000520804 MCM2P49736 904 aa21.47■■□□□ 1.03
PABPC1-215ENST00000520804 ANGPT1Q15389 498 aa21.47■■□□□ 1.03
PABPC1-215ENST00000520804 PABPC1LQ4VXU2 614 aaKnown RBP21.47■■□□□ 1.03
PABPC1-215ENST00000520804 SEZ6Q53EL9 994 aa21.47■■□□□ 1.03
PABPC1-215ENST00000520804 AK8Q96MA6 479 aa21.47■■□□□ 1.03
PABPC1-215ENST00000520804 NUB1Q9Y5A7 615 aa21.47■■□□□ 1.03
PABPC1-215ENST00000520804 PDCD11Q14690 1871 aaKnown RBP21.46■■□□□ 1.03
PABPC1-215ENST00000520804 NPHP3-ACAD11A0A0J9YXS1 232 aa21.46■■□□□ 1.03
PABPC1-215ENST00000520804 WDR27A2RRH5 827 aa21.46■■□□□ 1.03
PABPC1-215ENST00000520804 PRR23AA6NEV1 266 aa21.46■■□□□ 1.03
PABPC1-215ENST00000520804 CLDN3O15551 220 aa21.46■■□□□ 1.03
PABPC1-215ENST00000520804 SLC26A4O43511 780 aa21.46■■□□□ 1.03
PABPC1-215ENST00000520804 ABLIM3O94929 683 aa21.46■■□□□ 1.03
PABPC1-215ENST00000520804 GPC5P78333 572 aa21.46■■□□□ 1.03
PABPC1-215ENST00000520804 MCL1Q07820 350 aa21.46■■□□□ 1.03
PABPC1-215ENST00000520804 MRPL58Q14197 206 aaKnown RBP21.46■■□□□ 1.03
PABPC1-215ENST00000520804 ARSHQ5FYA8 562 aa21.46■■□□□ 1.03
PABPC1-215ENST00000520804 FRMD5Q7Z6J6 570 aa21.46■■□□□ 1.03
PABPC1-215ENST00000520804 NPAS3Q8IXF0 933 aa21.46■■□□□ 1.03
PABPC1-215ENST00000520804 UPF2Q9HAU5 1272 aaKnown RBP21.46■■□□□ 1.03
PABPC1-215ENST00000520804 LARSQ9P2J5 1176 aaKnown RBP21.46■■□□□ 1.03
PABPC1-215ENST00000520804 SMC3Q9UQE7 1217 aa21.46■■□□□ 1.03
PABPC1-215ENST00000520804 MYH15Q9Y2K3 1946 aa21.46■■□□□ 1.03
PABPC1-215ENST00000520804 DMDP11532 3685 aa21.45■■□□□ 1.03
PABPC1-215ENST00000520804 ARHGEF37A1IGU5 675 aa21.45■■□□□ 1.02
PABPC1-215ENST00000520804 H0YCG3 227 aa21.45■■□□□ 1.02
PABPC1-215ENST00000520804 H7C4K7 107 aa21.45■■□□□ 1.02
PABPC1-215ENST00000520804 ELF1P32519 619 aa21.45■■□□□ 1.02
PABPC1-215ENST00000520804 NCKAP1LP55160 1127 aa21.45■■□□□ 1.02
PABPC1-215ENST00000520804 CACNB1Q02641 598 aaPredicted RBP21.45■■□□□ 1.02
PABPC1-215ENST00000520804 KCNN1Q92952 543 aa21.45■■□□□ 1.02
PABPC1-215ENST00000520804 SUSD3Q96L08 255 aa21.45■■□□□ 1.02
PABPC1-215ENST00000520804 RHOP08100 348 aa21.44■■□□□ 1.02
PABPC1-215ENST00000520804 ATF2P15336 505 aa21.44■■□□□ 1.02
PABPC1-215ENST00000520804 MCM4P33991 863 aa21.44■■□□□ 1.02
PABPC1-215ENST00000520804 NKD2Q969F2 451 aaPredicted RBP21.44■■□□□ 1.02
PABPC1-215ENST00000520804 HAPLN2Q9GZV7 340 aa21.44■■□□□ 1.02
PABPC1-215ENST00000520804 PLEKHA5Q9HAU0 1116 aa21.44■■□□□ 1.02
PABPC1-215ENST00000520804 AVENQ9NQS1 362 aaPredicted RBP21.44■■□□□ 1.02
PABPC1-215ENST00000520804 TUBGCP4Q9UGJ1 667 aa21.44■■□□□ 1.02
PABPC1-215ENST00000520804 FBXL5Q9UKA1 691 aa21.44■■□□□ 1.02
PABPC1-215ENST00000520804 ODF2LQ9ULJ1 636 aa21.44■■□□□ 1.02
PABPC1-215ENST00000520804 MRPS23Q9Y3D9 190 aaKnown RBP21.44■■□□□ 1.02
PABPC1-215ENST00000520804 SIT1Q9Y3P8 196 aa21.44■■□□□ 1.02
PABPC1-215ENST00000520804 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.44■■□□□ 1.02
PABPC1-215ENST00000520804 ZFHX2Q9C0A1 2572 aaPredicted RBP21.44■■□□□ 1.02
PABPC1-215ENST00000520804 PRRG1O14668 218 aa21.43■■□□□ 1.02
PABPC1-215ENST00000520804 LRG1P02750 347 aa21.43■■□□□ 1.02
PABPC1-215ENST00000520804 CXCL8P10145 99 aa21.43■■□□□ 1.02
PABPC1-215ENST00000520804 UBA7P41226 1012 aa21.43■■□□□ 1.02
PABPC1-215ENST00000520804 ARPP19P56211 112 aa21.43■■□□□ 1.02
PABPC1-215ENST00000520804 STARD6P59095 220 aa21.43■■□□□ 1.02
PABPC1-215ENST00000520804 SLC5A9Q2M3M2 681 aa21.43■■□□□ 1.02
PABPC1-215ENST00000520804 LARP1BQ659C4 914 aaKnown RBP21.43■■□□□ 1.02
PABPC1-215ENST00000520804 HAUS6Q7Z4H7 955 aa21.43■■□□□ 1.02
PABPC1-215ENST00000520804 TCEAL8Q8IYN2 117 aa21.43■■□□□ 1.02
PABPC1-215ENST00000520804 ING5Q8WYH8 240 aa21.43■■□□□ 1.02
PABPC1-215ENST00000520804 DDX12PQ92771 950 aa21.43■■□□□ 1.02
PABPC1-215ENST00000520804 CALML4Q96GE6 196 aa21.43■■□□□ 1.02
PABPC1-215ENST00000520804 SHDQ96IW2 340 aa21.43■■□□□ 1.02
PABPC1-215ENST00000520804 TBC1D32Q96NH3 1257 aa21.43■■□□□ 1.02
PABPC1-215ENST00000520804 REEP2Q9BRK0 252 aa21.43■■□□□ 1.02
PABPC1-215ENST00000520804 CYP4F11Q9HBI6 524 aa21.43■■□□□ 1.02
PABPC1-215ENST00000520804 DLGAP2Q9P1A6 1054 aa21.43■■□□□ 1.02
PABPC1-215ENST00000520804 SEC24AO95486 1093 aa21.42■■□□□ 1.02
PABPC1-215ENST00000520804 DCNP07585 359 aaKnown RBP21.42■■□□□ 1.02
PABPC1-215ENST00000520804 CLTAP09496 248 aa21.42■■□□□ 1.02
PABPC1-215ENST00000520804 PTPN2P17706 415 aa21.42■■□□□ 1.02
PABPC1-215ENST00000520804 MATR3P43243 847 aaKnown RBP eCLIP21.42■■□□□ 1.02
PABPC1-215ENST00000520804 CTXN3Q4LDR2 81 aa21.42■■□□□ 1.02
PABPC1-215ENST00000520804 SPECC1Q5M775 1068 aa21.42■■□□□ 1.02
PABPC1-215ENST00000520804 TPGS2Q68CL5 300 aa21.42■■□□□ 1.02
PABPC1-215ENST00000520804 APPL2Q8NEU8 664 aa21.42■■□□□ 1.02
PABPC1-215ENST00000520804 LRRC15Q8TF66 581 aa21.42■■□□□ 1.02
PABPC1-215ENST00000520804 BICD1Q96G01 975 aa21.42■■□□□ 1.02
PABPC1-215ENST00000520804 KXD1Q9BQD3 176 aa21.42■■□□□ 1.02
PABPC1-215ENST00000520804 GDE1Q9NZC3 331 aa21.42■■□□□ 1.02
PABPC1-215ENST00000520804 PCDHB8Q9UN66 801 aa21.42■■□□□ 1.02
PABPC1-215ENST00000520804 TTC26A0AVF1 554 aa21.41■■□□□ 1.02
PABPC1-215ENST00000520804 BMP15O95972 392 aa21.41■■□□□ 1.02
PABPC1-215ENST00000520804 SCP2P22307 547 aa21.41■■□□□ 1.02
PABPC1-215ENST00000520804 LRPAP1P30533 357 aa21.41■■□□□ 1.02
PABPC1-215ENST00000520804 SPAG1Q07617 926 aa21.41■■□□□ 1.02
PABPC1-215ENST00000520804 SNW1Q13573 536 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms