RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 SMTNP53814 917 aa16.59■□□□□ 0.25
CSMD1-207ENST00000520451 SLC12A3P55017 1021 aa16.59■□□□□ 0.25
CSMD1-207ENST00000520451 NOLC1Q14978 699 aaKnown RBP eCLIP16.59■□□□□ 0.25
CSMD1-207ENST00000520451 SPECC1Q5M775 1068 aa16.59■□□□□ 0.25
CSMD1-207ENST00000520451 PHLDB3Q6NSJ2 640 aa16.59■□□□□ 0.25
CSMD1-207ENST00000520451 RTL10Q7L3V2 364 aa16.59■□□□□ 0.25
CSMD1-207ENST00000520451 SYT2Q8N9I0 419 aaPredicted RBP16.59■□□□□ 0.25
CSMD1-207ENST00000520451 ING5Q8WYH8 240 aa16.59■□□□□ 0.25
CSMD1-207ENST00000520451 NKD2Q969F2 451 aaPredicted RBP16.59■□□□□ 0.25
CSMD1-207ENST00000520451 KCNG1Q9UIX4 513 aa16.59■□□□□ 0.25
CSMD1-207ENST00000520451 KCNH3Q9ULD8 1083 aa16.59■□□□□ 0.25
CSMD1-207ENST00000520451 PRRG1O14668 218 aa16.58■□□□□ 0.24
CSMD1-207ENST00000520451 SYN3O14994 580 aa16.58■□□□□ 0.24
CSMD1-207ENST00000520451 MEFVO15553 781 aaPredicted RBP16.58■□□□□ 0.24
CSMD1-207ENST00000520451 CD2BP2O95400 341 aaKnown RBP16.58■□□□□ 0.24
CSMD1-207ENST00000520451 ELF1P32519 619 aa16.58■□□□□ 0.24
CSMD1-207ENST00000520451 RPL9P32969 192 aaKnown RBP16.58■□□□□ 0.24
CSMD1-207ENST00000520451 MATR3P43243 847 aaKnown RBP eCLIP16.58■□□□□ 0.24
CSMD1-207ENST00000520451 ARPP19P56211 112 aa16.58■□□□□ 0.24
CSMD1-207ENST00000520451 GPC5P78333 572 aa16.58■□□□□ 0.24
CSMD1-207ENST00000520451 ROR1Q01973 937 aa16.58■□□□□ 0.24
CSMD1-207ENST00000520451 CACNB1Q02641 598 aaPredicted RBP16.58■□□□□ 0.24
CSMD1-207ENST00000520451 TMEM119Q4V9L6 283 aa16.58■□□□□ 0.24
CSMD1-207ENST00000520451 SEZ6Q53EL9 994 aa16.58■□□□□ 0.24
CSMD1-207ENST00000520451 ARL6IP4Q66PJ3 421 aaKnown RBP16.58■□□□□ 0.24
CSMD1-207ENST00000520451 SLC8B1Q6J4K2 584 aa16.58■□□□□ 0.24
CSMD1-207ENST00000520451 NPAS3Q8IXF0 933 aa16.58■□□□□ 0.24
CSMD1-207ENST00000520451 KCTD17Q8N5Z5 321 aa16.58■□□□□ 0.24
CSMD1-207ENST00000520451 MRPS23Q9Y3D9 190 aaKnown RBP16.58■□□□□ 0.24
CSMD1-207ENST00000520451 PTPRZ1P23471 2315 aaPredicted RBP16.57■□□□□ 0.24
CSMD1-207ENST00000520451 NPHP3-ACAD11A0A0J9YXS1 232 aa16.57■□□□□ 0.24
CSMD1-207ENST00000520451 WDR27A2RRH5 827 aa16.57■□□□□ 0.24
CSMD1-207ENST00000520451 H7C4K7 107 aa16.57■□□□□ 0.24
CSMD1-207ENST00000520451 LRG1P02750 347 aa16.57■□□□□ 0.24
CSMD1-207ENST00000520451 DCNP07585 359 aaKnown RBP16.57■□□□□ 0.24
CSMD1-207ENST00000520451 RHOP08100 348 aa16.57■□□□□ 0.24
CSMD1-207ENST00000520451 MCM4P33991 863 aa16.57■□□□□ 0.24
CSMD1-207ENST00000520451 SLC10A6Q3KNW5 377 aa16.57■□□□□ 0.24
CSMD1-207ENST00000520451 ZPBP2Q6X784 338 aa16.57■□□□□ 0.24
CSMD1-207ENST00000520451 ZNF461Q8TAF7 563 aa16.57■□□□□ 0.24
CSMD1-207ENST00000520451 BICD1Q96G01 975 aa16.57■□□□□ 0.24
CSMD1-207ENST00000520451 KXD1Q9BQD3 176 aa16.57■□□□□ 0.24
CSMD1-207ENST00000520451 FOXQ1Q9C009 403 aa16.57■□□□□ 0.24
CSMD1-207ENST00000520451 KCND2Q9NZV8 630 aa16.57■□□□□ 0.24
CSMD1-207ENST00000520451 SIT1Q9Y3P8 196 aa16.57■□□□□ 0.24
CSMD1-207ENST00000520451 RIF1Q5UIP0 2472 aaKnown RBP16.57■□□□□ 0.24
CSMD1-207ENST00000520451 ARHGEF37A1IGU5 675 aa16.56■□□□□ 0.24
CSMD1-207ENST00000520451 CLDN3O15551 220 aa16.56■□□□□ 0.24
CSMD1-207ENST00000520451 ABLIM3O94929 683 aa16.56■□□□□ 0.24
CSMD1-207ENST00000520451 CXCL8P10145 99 aa16.56■□□□□ 0.24
CSMD1-207ENST00000520451 MCL1Q07820 350 aa16.56■□□□□ 0.24
CSMD1-207ENST00000520451 SLC5A9Q2M3M2 681 aa16.56■□□□□ 0.24
CSMD1-207ENST00000520451 CTXN3Q4LDR2 81 aa16.56■□□□□ 0.24
CSMD1-207ENST00000520451 SHDQ96IW2 340 aa16.56■□□□□ 0.24
CSMD1-207ENST00000520451 SUSD3Q96L08 255 aa16.56■□□□□ 0.24
CSMD1-207ENST00000520451 UPF2Q9HAU5 1272 aaKnown RBP16.56■□□□□ 0.24
CSMD1-207ENST00000520451 CYP4F11Q9HBI6 524 aa16.56■□□□□ 0.24
CSMD1-207ENST00000520451 LARSQ9P2J5 1176 aaKnown RBP16.56■□□□□ 0.24
CSMD1-207ENST00000520451 TUBGCP4Q9UGJ1 667 aa16.56■□□□□ 0.24
CSMD1-207ENST00000520451 FBXL5Q9UKA1 691 aa16.56■□□□□ 0.24
CSMD1-207ENST00000520451 SMC3Q9UQE7 1217 aa16.56■□□□□ 0.24
CSMD1-207ENST00000520451 H0YCG3 227 aa16.55■□□□□ 0.24
CSMD1-207ENST00000520451 TBC1D4O60343 1298 aa16.55■□□□□ 0.24
CSMD1-207ENST00000520451 ATF2P15336 505 aa16.55■□□□□ 0.24
CSMD1-207ENST00000520451 NCKAP1LP55160 1127 aa16.55■□□□□ 0.24
CSMD1-207ENST00000520451 STARD6P59095 220 aa16.55■□□□□ 0.24
CSMD1-207ENST00000520451 SNW1Q13573 536 aaKnown RBP16.55■□□□□ 0.24
CSMD1-207ENST00000520451 MRPL58Q14197 206 aaKnown RBP16.55■□□□□ 0.24
CSMD1-207ENST00000520451 ARSHQ5FYA8 562 aa16.55■□□□□ 0.24
CSMD1-207ENST00000520451 ZNF280DQ6N043 979 aa16.55■□□□□ 0.24
CSMD1-207ENST00000520451 GPBP1Q86WP2 473 aa16.55■□□□□ 0.24
CSMD1-207ENST00000520451 TCEAL8Q8IYN2 117 aa16.55■□□□□ 0.24
CSMD1-207ENST00000520451 APPL2Q8NEU8 664 aa16.55■□□□□ 0.24
CSMD1-207ENST00000520451 PJA1Q8NG27 643 aa16.55■□□□□ 0.24
CSMD1-207ENST00000520451 MCRS1Q96EZ8 462 aa16.55■□□□□ 0.24
CSMD1-207ENST00000520451 AK8Q96MA6 479 aa16.55■□□□□ 0.24
CSMD1-207ENST00000520451 TBC1D32Q96NH3 1257 aa16.55■□□□□ 0.24
CSMD1-207ENST00000520451 GDE1Q9NZC3 331 aa16.55■□□□□ 0.24
CSMD1-207ENST00000520451 DLGAP2Q9P1A6 1054 aa16.55■□□□□ 0.24
CSMD1-207ENST00000520451 CITO14578 2027 aa16.55■□□□□ 0.24
CSMD1-207ENST00000520451 MYH15Q9Y2K3 1946 aa16.55■□□□□ 0.24
CSMD1-207ENST00000520451 NOTCH4Q99466 2003 aa16.54■□□□□ 0.24
CSMD1-207ENST00000520451 FAM186AA6NE01 2351 aa16.54■□□□□ 0.24
CSMD1-207ENST00000520451 SEC24AO95486 1093 aa16.54■□□□□ 0.24
CSMD1-207ENST00000520451 CLTAP09496 248 aa16.54■□□□□ 0.24
CSMD1-207ENST00000520451 CEBPBP17676 345 aa16.54■□□□□ 0.24
CSMD1-207ENST00000520451 PTPN2P17706 415 aa16.54■□□□□ 0.24
CSMD1-207ENST00000520451 UBA7P41226 1012 aa16.54■□□□□ 0.24
CSMD1-207ENST00000520451 MCM2P49736 904 aa16.54■□□□□ 0.24
CSMD1-207ENST00000520451 LIG4P49917 911 aa16.54■□□□□ 0.24
CSMD1-207ENST00000520451 PFKPQ01813 784 aa16.54■□□□□ 0.24
CSMD1-207ENST00000520451 SPAG1Q07617 926 aa16.54■□□□□ 0.24
CSMD1-207ENST00000520451 DHX8Q14562 1220 aaKnown RBP16.54■□□□□ 0.24
CSMD1-207ENST00000520451 MLF2Q15773 248 aaPredicted RBP16.54■□□□□ 0.24
CSMD1-207ENST00000520451 TPGS2Q68CL5 300 aa16.54■□□□□ 0.24
CSMD1-207ENST00000520451 HAUS6Q7Z4H7 955 aa16.54■□□□□ 0.24
CSMD1-207ENST00000520451 TMEM130Q8N3G9 435 aa16.54■□□□□ 0.24
CSMD1-207ENST00000520451 DDX12PQ92771 950 aa16.54■□□□□ 0.24
CSMD1-207ENST00000520451 KIF12Q96FN5 646 aa16.54■□□□□ 0.24
CSMD1-207ENST00000520451 CALML4Q96GE6 196 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms