RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 HOXA11P31270 313 aaPredicted RBP15.61■□□□□ 0.09
CLN8-204ENST00000519254 AMPD2Q01433 879 aa15.61■□□□□ 0.09
CLN8-204ENST00000519254 PCBP1Q15365 356 aaKnown RBP eCLIP15.61■□□□□ 0.09
CLN8-204ENST00000519254 C15orf39Q6ZRI6 1047 aa15.61■□□□□ 0.09
CLN8-204ENST00000519254 SV2AQ7L0J3 742 aa15.61■□□□□ 0.09
CLN8-204ENST00000519254 USP37Q86T82 979 aa15.61■□□□□ 0.09
CLN8-204ENST00000519254 FAM212AQ96EL1 285 aa15.61■□□□□ 0.09
CLN8-204ENST00000519254 SYT11Q9BT88 431 aa15.61■□□□□ 0.09
CLN8-204ENST00000519254 OSBPL7Q9BZF2 842 aa15.61■□□□□ 0.09
CLN8-204ENST00000519254 CDC23Q9UJX2 597 aa15.61■□□□□ 0.09
CLN8-204ENST00000519254 ANK1P16157 1881 aa15.61■□□□□ 0.09
CLN8-204ENST00000519254 FAM189A1O60320 539 aa15.6■□□□□ 0.09
CLN8-204ENST00000519254 MCF2P10911 925 aa15.6■□□□□ 0.09
CLN8-204ENST00000519254 TRIM60Q495X7 471 aa15.6■□□□□ 0.09
CLN8-204ENST00000519254 SLC27A1Q6PCB7 646 aa15.6■□□□□ 0.09
CLN8-204ENST00000519254 TXLNBQ8N3L3 684 aa15.6■□□□□ 0.09
CLN8-204ENST00000519254 FBXL13Q8NEE6 735 aa15.6■□□□□ 0.09
CLN8-204ENST00000519254 SLC30A5Q8TAD4 765 aa15.6■□□□□ 0.09
CLN8-204ENST00000519254 TAS1R2Q8TE23 839 aa15.6■□□□□ 0.09
CLN8-204ENST00000519254 KAT5Q92993 513 aa15.6■□□□□ 0.09
CLN8-204ENST00000519254 PAWRQ96IZ0 340 aaKnown RBP15.6■□□□□ 0.09
CLN8-204ENST00000519254 FAM84AQ96KN4 292 aa15.6■□□□□ 0.09
CLN8-204ENST00000519254 PACSIN1Q9BY11 444 aa15.6■□□□□ 0.09
CLN8-204ENST00000519254 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.6■□□□□ 0.09
CLN8-204ENST00000519254 NAGPAQ9UK23 515 aa15.6■□□□□ 0.09
CLN8-204ENST00000519254 ST3GAL5Q9UNP4 418 aa15.6■□□□□ 0.09
CLN8-204ENST00000519254 V9GYY5 206 aaPredicted RBP15.6■□□□□ 0.09
CLN8-204ENST00000519254 MROH7Q68CQ1 1323 aa15.6■□□□□ 0.09
CLN8-204ENST00000519254 DDX3XO00571 662 aaKnown RBP eCLIP15.59■□□□□ 0.095e-9■■■■□ 23.9
CLN8-204ENST00000519254 TLR3O15455 904 aaKnown RBP15.59■□□□□ 0.09
CLN8-204ENST00000519254 MOCS3O95396 460 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 TUBB2AQ13885 445 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 HSP90AA2PQ14568 343 aaPredicted RBP15.59■□□□□ 0.09
CLN8-204ENST00000519254 NAB2Q15742 525 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 FBXO47Q5MNV8 452 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 C10orf76Q5T2E6 689 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 LMBRD2Q68DH5 695 aaPredicted RBP15.59■□□□□ 0.09
CLN8-204ENST00000519254 TMEM192Q8IY95 271 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 ANKLE1Q8NAG6 615 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 KREMEN1Q96MU8 473 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 FNBP1Q96RU3 617 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 TUBB2BQ9BVA1 445 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 EIF2AQ9BY44 585 aaKnown RBP15.59■□□□□ 0.09
CLN8-204ENST00000519254 TRIM6Q9C030 488 aaPredicted RBP15.59■□□□□ 0.09
CLN8-204ENST00000519254 C11orf49Q9H6J7 331 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 AGO3Q9H9G7 860 aaKnown RBP15.59■□□□□ 0.09
CLN8-204ENST00000519254 PDE11AQ9HCR9 933 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 LUC7LQ9NQ29 371 aaKnown RBP15.59■□□□□ 0.09
CLN8-204ENST00000519254 RAB20Q9NX57 234 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 ATP11BQ9Y2G3 1177 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 CAPN6Q9Y6Q1 641 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 ENC1O14682 589 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 CAND2O75155 1236 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 TADA3O75528 432 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 CD4P01730 458 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 ATP1A1P05023 1023 aaKnown RBP15.59■□□□□ 0.09
CLN8-204ENST00000519254 STAG3L1P0CL83 205 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 COL6A1P12109 1028 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 AXLP30530 894 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 CD52P31358 61 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 PAK2Q13177 524 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 BMS1Q14692 1282 aaKnown RBP15.59■□□□□ 0.09
CLN8-204ENST00000519254 LPIN1Q14693 890 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 PAPD7Q5XG87 772 aaKnown RBP15.59■□□□□ 0.09
CLN8-204ENST00000519254 TWF2Q6IBS0 349 aaKnown RBP15.59■□□□□ 0.09
CLN8-204ENST00000519254 ALKBH5Q6P6C2 394 aaKnown RBP15.59■□□□□ 0.09
CLN8-204ENST00000519254 APBB1IPQ7Z5R6 666 aaPredicted RBP15.59■□□□□ 0.09
CLN8-204ENST00000519254 FMNL3Q8IVF7 1028 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 LNX1Q8TBB1 728 aaPredicted RBP15.59■□□□□ 0.09
CLN8-204ENST00000519254 HELQQ8TDG4 1101 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 ANKRD7Q92527 254 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.59■□□□□ 0.09
CLN8-204ENST00000519254 CPSF3Q9UKF6 684 aaKnown RBP15.59■□□□□ 0.09
CLN8-204ENST00000519254 PTPRJQ12913 1337 aa15.59■□□□□ 0.09
CLN8-204ENST00000519254 DCDC2CA8MYV0 355 aa15.58■□□□□ 0.08
CLN8-204ENST00000519254 TACC1O75410 805 aa15.58■□□□□ 0.08
CLN8-204ENST00000519254 C4BPAP04003 597 aaKnown RBP15.58■□□□□ 0.08
CLN8-204ENST00000519254 CXCL8P10145 99 aa15.58■□□□□ 0.08
CLN8-204ENST00000519254 TNNI1P19237 187 aa15.58■□□□□ 0.08
CLN8-204ENST00000519254 DCAF4L1Q3SXM0 396 aa15.58■□□□□ 0.08
CLN8-204ENST00000519254 FAM26DQ5JW98 314 aa15.58■□□□□ 0.08
CLN8-204ENST00000519254 TRAPPC11Q7Z392 1133 aa15.58■□□□□ 0.08
CLN8-204ENST00000519254 VPS36Q86VN1 386 aa15.58■□□□□ 0.08
CLN8-204ENST00000519254 BRSK2Q8IWQ3 736 aa15.58■□□□□ 0.08
CLN8-204ENST00000519254 RNF10Q8N5U6 811 aaKnown RBP15.58■□□□□ 0.08
CLN8-204ENST00000519254 MNS1Q8NEH6 495 aa15.58■□□□□ 0.08
CLN8-204ENST00000519254 TRIM58Q8NG06 486 aa15.58■□□□□ 0.08
CLN8-204ENST00000519254 CAGE1Q8TC20 777 aa15.58■□□□□ 0.08
CLN8-204ENST00000519254 APOL6Q9BWW8 343 aa15.58■□□□□ 0.08
CLN8-204ENST00000519254 RPF1Q9H9Y2 349 aaKnown RBP15.58■□□□□ 0.08
CLN8-204ENST00000519254 HES2Q9Y543 173 aa15.58■□□□□ 0.08
CLN8-204ENST00000519254 ANO9A1A5B4 782 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 GPR182O15218 404 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 CCDC172P0C7W6 258 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 TLE2Q04725 743 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 BFSP2Q13515 415 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 ERCC6LQ2NKX8 1250 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 ZACNQ401N2 412 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 LRRC8DQ7L1W4 858 aa15.57■□□□□ 0.08
CLN8-204ENST00000519254 DNAAF5Q86Y56 855 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms