RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 ODF2LQ9ULJ1 636 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 FAM208BQ5VWN6 2430 aa11.57□□□□□ -0.56
PDGFRB-203ENST00000517660 TMEM189-UBE2V1I3L0A0 370 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 ABLIM1O14639 778 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 TGM5O43548 720 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 N4BP1O75113 896 aaKnown RBP11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 B3GAT3O94766 335 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 SPATA31D3P0C874 917 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 KCNE1P15382 129 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 RPL17P18621 184 aaKnown RBP11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 PLCG1P19174 1290 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 SDHBP21912 280 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 SCP2P22307 547 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 DDIT3P35638 169 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 CACNB1Q02641 598 aaPredicted RBP11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 GRIN1Q05586 938 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 RESTQ13127 1097 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 DHX8Q14562 1220 aaKnown RBP11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 MCM6Q14566 821 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 KARSQ15046 597 aaKnown RBP11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 PTPAQ15257 358 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 SPECC1Q5M775 1068 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 PDXDC1Q6P996 788 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 PRSS55Q6UWB4 352 aaPredicted RBP11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 ZPBP2Q6X784 338 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 SPATA31D4Q6ZUB0 917 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 CCDC149Q6ZUS6 474 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 OTOP3Q7RTS5 596 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 C1orf210Q8IVY1 113 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 RASSF8Q8NHQ8 419 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 LNX1Q8TBB1 728 aaPredicted RBP11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 RAD54LQ92698 747 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 KCNN1Q92952 543 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 ACSF2Q96CM8 615 aaPredicted RBP11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 ZBTB45Q96K62 511 aaPredicted RBP11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 CCSER1Q9C0I3 900 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 BLOC1S4Q9NUP1 217 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 FBXL21Q9UKT6 434 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 CDV3Q9UKY7 258 aaKnown RBP11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 CLIC4Q9Y696 253 aa11.56□□□□□ -0.56
PDGFRB-203ENST00000517660 COL4A3Q01955 1670 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 FASNP49327 2511 aaKnown RBP11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 K7ELQ4 463 aaPredicted RBP11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 CLDN3O15551 220 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 TRAPPC3O43617 180 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 LRRN2O75325 713 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 FAM13AO94988 1023 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 PAPLNO95428 1278 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 KRT18P05783 430 aaKnown RBP11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 CFHP08603 1231 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 MYBP10242 640 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 HARSP12081 509 aaKnown RBP11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 FGFR3P22607 806 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 MARCKSP29966 332 aaPredicted RBP11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 CLCNKBP51801 687 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 NCKAP1LP55160 1127 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 PSMD5Q16401 504 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 UPP1Q16831 310 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 PPM1JQ5JR12 505 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 CD300LGQ6UXG3 332 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 HAUS6Q7Z4H7 955 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 GLYCTKQ8IVS8 523 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 MYCT1Q8N699 235 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 LRRC15Q8TF66 581 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 RSAD2Q8WXG1 361 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 SMG7Q92540 1137 aaKnown RBP11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 CLSTN3Q9BQT9 956 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 REEP2Q9BRK0 252 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 TBC1D17Q9HA65 648 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 PARVGQ9HBI0 331 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 ZDHHC7Q9NXF8 308 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 CCDC39Q9UFE4 941 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 MTMR6Q9Y217 621 aa11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 SRPRBQ9Y5M8 271 aaKnown RBP11.55□□□□□ -0.56
PDGFRB-203ENST00000517660 PRR5-ARHGAP8B1AHC4 643 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 TRAK2O60296 914 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 KINO60870 393 aaKnown RBP11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 RFPL2O75678 378 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 ZMYND10O75800 440 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 CLTAP09496 248 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 IGFBP6P24592 240 aaPredicted RBP11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 RPL9P32969 192 aaKnown RBP11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 ZNF131P52739 623 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 ARHGAP8P85298 464 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 LMNB2Q03252 620 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 SOX4Q06945 474 aaPredicted RBP11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 MCL1Q07820 350 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 NOLC1Q14978 699 aaKnown RBP eCLIP11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 KYAT1Q16773 422 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 SLC10A6Q3KNW5 377 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 FAM173BQ6P4H8 233 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 LARP4BQ92615 738 aaKnown RBP11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 STAMQ92783 540 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 ZNF707Q96C28 371 aaPredicted RBP11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 BICD1Q96G01 975 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 EPSTI1Q96J88 318 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 ZMAT2Q96NC0 199 aaKnown RBP11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 PRKD2Q9BZL6 878 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 ZSCAN16Q9H4T2 348 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms