RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 CYP46A1Q9Y6A2 500 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 SMARCA4P51532 1647 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 WDR17Q8IZU2 1322 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 LMTK2Q8IWU2 1503 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 UGGT2Q9NYU1 1516 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 DNMBPQ6XZF7 1577 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 A0A0J9YVX5 310 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 MINDY4BA8MYZ0 360 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 XPO1O14980 1071 aaKnown RBP5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 AREL1O15033 823 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 HNRNPRO43390 633 aaKnown RBP5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 KRT86O43790 486 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 MTA2O94776 668 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 SUN1O94901 812 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 TJP3O95049 919 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 KRT75O95678 551 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 PABPC4LP0CB38 370 aaKnown RBP5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 CD9P21926 228 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 KCNA3P22001 575 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 ENPP1P22413 925 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 ACADSBP45954 432 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 PCYT1AP49585 367 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 CLK1P49759 484 aaKnown RBP5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 PDE6CP51160 858 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 GPC3P51654 580 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 THOP1P52888 689 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 ZC3H6P61129 1189 aaKnown RBP5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 PPP2R2AP63151 447 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 CYP4A11Q02928 519 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 ITGB3BPQ13352 177 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 COG2Q14746 738 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 CCDC6Q16204 474 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 DDB1Q16531 1140 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 KCNMB1Q16558 191 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 MLANAQ16655 118 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 CNPY1Q3B7I2 92 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 LIN52Q52LA3 116 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 SPDYAQ5MJ70 313 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 WDR45BQ5MNZ6 344 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 CYP4A22Q5TCH4 519 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 SCARA3Q6AZY7 606 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 B3GNT6Q6ZMB0 384 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 TRAPPC11Q7Z392 1133 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 ZNF572Q7Z3I7 529 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 CABP7Q86V35 215 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 DDX42Q86XP3 938 aaKnown RBP eCLIP5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 IQCKQ8N0W5 287 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 CARNMT1Q8N4J0 409 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 TMCO5AQ8N6Q1 288 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 GOLM1Q8NBJ4 401 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 BHLHE22Q8NFJ8 381 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 FNDC8Q8TC99 324 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 ZNF507Q8TCN5 953 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 PIGOQ8TEQ8 1089 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 SSH1Q8WYL5 1049 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 GRAMD1AQ96CP6 724 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 CHAMP1Q96JM3 812 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 CEP19Q96LK0 163 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 TMEM237Q96Q45 408 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 RPS6KC1Q96S38 1066 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 SLC38A3Q99624 504 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 TRIM55Q9BYV6 548 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 INO80BQ9C086 356 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 KLHL4Q9C0H6 718 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 GBA3Q9H227 469 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 TRPC7Q9HCX4 862 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 KCNMB3Q9NPA1 279 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 PLCB1Q9NQ66 1216 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 PRDM5Q9NQX1 630 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 C19orf73Q9NVV2 129 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 CYP39A1Q9NYL5 469 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 LZTS1Q9Y250 596 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 SNX9Q9Y5X1 595 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 SNCAIPQ9Y6H5 919 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 NUMBLQ9Y6R0 609 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 MROH7Q68CQ1 1323 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 CNTNAP4Q9C0A0 1308 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 NUP155O75694 1391 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 ARHGEF11O15085 1522 aa5.13□□□□□ -1.59
HMGB1P19-201ENST00000517578 ARPC4-TTLL3A0A0A6YYG9 625 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 PVALEFA0A1B0GWK0 134 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 GNAT3A8MTJ3 354 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 PRR33A8MZF0 331 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 E9PBE3 544 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 H3BQV1 296 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 GOLGA8MH3BSY2 632 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 RBAK-RBAKDNI3L0D1 243 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 GUCY1B2O75343 617 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 TSPAN9O75954 239 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 SLITRK5O94991 958 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 YEATS4O95619 227 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 PF4P02776 101 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 S100A6P06703 90 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 PDHA1P08559 390 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 ZNF16P17020 682 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 TCP1P17987 556 aaKnown RBP5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 GNAT2P19087 354 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 RXRAP19793 462 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 IL32P24001 234 aa5.12□□□□□ -1.59
HMGB1P19-201ENST00000517578 TKTP29401 623 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms