RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 ICA1Q05084 483 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 MCL1Q07820 350 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 ZNF460Q14592 562 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 KIF22Q14807 665 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 KARSQ15046 597 aaKnown RBP9.06□□□□□ -0.96
SFXN1-211ENST00000515736 CCDC96Q2M329 555 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 ABCB5Q2M3G0 1257 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 SLC9C1Q4G0N8 1177 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 ISM2Q6H9L7 571 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 LHFPL2Q6ZUX7 228 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 ACAD11Q709F0 780 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.06□□□□□ -0.96
SFXN1-211ENST00000515736 SMYD4Q8IYR2 804 aaPredicted RBP9.06□□□□□ -0.96
SFXN1-211ENST00000515736 ADSSL1Q8N142 457 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 GIMAP8Q8ND71 665 aaPredicted RBP9.06□□□□□ -0.96
SFXN1-211ENST00000515736 BRI3BPQ8WY22 251 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 PTPRN2Q92932 1015 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 RELTQ969Z4 430 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 SCLYQ96I15 445 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 TEPSINQ96N21 525 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 IRX2Q9BZI1 471 aaPredicted RBP9.06□□□□□ -0.96
SFXN1-211ENST00000515736 TMEM60Q9H2L4 133 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 FAM105AQ9NUU6 356 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 ADD3Q9UEY8 706 aaKnown RBP9.06□□□□□ -0.96
SFXN1-211ENST00000515736 PCOLCE2Q9UKZ9 415 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 ACTL7BQ9Y614 415 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 PHLPP2Q6ZVD8 1323 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 A0A1W2PQC6 194 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 BLACEA4D250 179 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 CTIFO43310 598 aaKnown RBP9.05□□□□□ -0.96
SFXN1-211ENST00000515736 TPD52L2O43399 206 aaKnown RBP9.05□□□□□ -0.96
SFXN1-211ENST00000515736 TSPAN6O43657 245 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 KCNH1O95259 989 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 CETPP11597 493 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 EEF2P13639 858 aaKnown RBP9.05□□□□□ -0.96
SFXN1-211ENST00000515736 AMPD1P23109 780 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 PBX1P40424 430 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 GFRA1P56159 465 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 MAP4K2Q12851 820 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 NFIAQ12857 509 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 SF1Q15637 639 aaKnown RBP9.05□□□□□ -0.96
SFXN1-211ENST00000515736 SEPT7Q16181 437 aaKnown RBP9.05□□□□□ -0.96
SFXN1-211ENST00000515736 HYIQ5T013 277 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 RNF219Q5W0B1 726 aaPredicted RBP9.05□□□□□ -0.96
SFXN1-211ENST00000515736 KRT79Q5XKE5 535 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 SLFN13Q68D06 897 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 GTF2IRD2BQ6EKJ0 949 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 GTF2IRD2Q86UP8 949 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 FAM83AQ86UY5 434 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 GRAMD1CQ8IYS0 662 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.05□□□□□ -0.96
SFXN1-211ENST00000515736 FAM151AQ8WW52 585 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 KCTD13Q8WZ19 329 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 HOOK2Q96ED9 719 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 CDK5RAP3Q96JB5 506 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 C16orf45Q96MC5 204 aaPredicted RBP9.05□□□□□ -0.96
SFXN1-211ENST00000515736 MBOAT7Q96N66 472 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 WRNIP1Q96S55 665 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 AMNQ9BXJ7 453 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 TRIM9Q9C026 710 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 DNAJC18Q9H819 358 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 PSTPIP2Q9H939 334 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 EXOC1Q9NV70 894 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 SLC5A4Q9NY91 659 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 LRWD1Q9UFC0 647 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 PNMA2Q9UL42 364 aa9.05□□□□□ -0.96
SFXN1-211ENST00000515736 FRMPD2Q68DX3 1309 aaPredicted RBP9.05□□□□□ -0.96
SFXN1-211ENST00000515736 A0A0A0MRY4 1105 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 AKR1B15C9JRZ8 316 aaPredicted RBP9.04□□□□□ -0.96
SFXN1-211ENST00000515736 LCE2BO14633 110 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 GPR39O43194 453 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 KLRC4O43908 158 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 PEX14O75381 377 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 KIF20AO95235 890 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 BCRP11274 1271 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 CCNE1P24864 410 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 HOXC12P31275 282 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 IGFALSP35858 605 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 DGKGP49619 791 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 SNAPC2Q13487 334 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 MTMR1Q13613 665 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 PPP2R5AQ15172 486 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 TCP11X2Q5H9J9 407 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 HABP4Q5JVS0 413 aaKnown RBP9.04□□□□□ -0.96
SFXN1-211ENST00000515736 E4F1Q66K89 784 aaPredicted RBP9.04□□□□□ -0.96
SFXN1-211ENST00000515736 APTXQ7Z2E3 356 aaKnown RBP9.04□□□□□ -0.96
SFXN1-211ENST00000515736 ERO1BQ86YB8 467 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 C12orf50Q8NA57 414 aaPredicted RBP9.04□□□□□ -0.96
SFXN1-211ENST00000515736 C2CD4AQ8NCU7 369 aaPredicted RBP9.04□□□□□ -0.96
SFXN1-211ENST00000515736 SYTL5Q8TDW5 730 aaPredicted RBP9.04□□□□□ -0.96
SFXN1-211ENST00000515736 NELFBQ8WX92 580 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 ZKSCAN4Q969J2 545 aaPredicted RBP9.04□□□□□ -0.96
SFXN1-211ENST00000515736 FBXL18Q96ME1 805 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 CCDC140Q96MF4 163 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 BAG1Q99933 345 aaPredicted RBP9.04□□□□□ -0.96
SFXN1-211ENST00000515736 UBA5Q9GZZ9 404 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 VAT1LQ9HCJ6 419 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 INTS13Q9NVM9 706 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 CTNND2Q9UQB3 1225 aa9.04□□□□□ -0.96
SFXN1-211ENST00000515736 DIS3Q9Y2L1 958 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms